Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0881400-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:38257939:38261435:1 gene:Os01g0881400 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA repair metallo-beta-lactamase domain containing protein. (Os01t0881400-00)
Sequence	ATGCCGATAGAGATGCCGCGGCGGCTCCCCTTCGCCGTCGACACGTGGGGCCCCTCCTCC CGCCGCCGCCGCCACCGCTTCCTCACCCACGCGCACCGGGACCACCTCGTCGCCGCCGGC GGCGCCGCCGACTCCGGGGAATGCCCCGGCGCCGTCTACGCGACGCGGCTCACCCTCGAC CTCGCCCTCCGCCATTTTCCCCGGCTTGAGCGGGGGGAGTTCGTGGAGATGGAGGTGGGG AAGACGGTGGTGGTGGACGACCCCGCCGGGGCCTTCTCCGTCACGGCGTACGACGCCAAT CACTGCCCTGGGGCGGTTATGTTCTTGTTCGAGGGTCAATTCGGTAGCATTCTGCACACG GGGGACTGTCGGCTGACGCCAGATTGTGTACATAATTTGCCACTGAAGTACATAGCAAAG AAAGGGAAAGAAAACATTTGCCGTTTAGACTTTGTGTTCCTGGACTGCACATTTTCCAAA TGCTTCCTCAAGCTACCAAGCAAGGAGTCAGCTATTCAGCAGGTTATAGCTTGCATATGG AAGCATCCTCATGCTCCATTTGTCTATCTTGCATGTGATCTTCTTGGTCACGAAGAGATC CTAATTGAGGTGTCAAGGACATTTGGATCAAAGATTTATGTTGACAAGAGAAGGAACTCG GACTGTTTTCGAGCTCTATCTCTCATAGCCCCAGAAATCATCACTGAAGATCCATCTTGT CGATTCCAGATTCTTGGATTCCAAAACTTGTATGACAAAGCATGTACAAAGATTGAAGAG GCAAGGGCTAGCCTTCAGCCTGAACCTCTATTTATCCGTCCCTCAACACAGTGGTATGCG CACTGTGCTCAAAGCCAGAAACCTAGCCTAACAGAAGCTGTGCTGGATGGTTGTGGGGTC TGGCACATTTGTTTCTCCATCCATTCCTCTCGTGATGAGTTAGAACAGGCCTTGGAACTT CTCCAGCCTCAATGGGTAATTTCAACAACACCACCATGCTTTGCCATGGAATTGAGCTAT GTAAAGAAAAAATGTTTCAAGACCTGCTTAACTGCTGATGATCCACTGTGGAAGATATTC AAGAATCCTCTCCGAAAGTCAGTGTCCTCCCCTTCTACATTGCTGGATTCCGACACGCAC ACAAATGAAGATCACTCGATTTCTGTCGATGATGATCATGATCATTCAGCCTCTCCTAGT GGTGAAGAATGTACAGACTTTGATATCTGCACGCTTGAACTGAAGTTCATGCCATCCCCT CCAGTTCAGGAACCAGATATTACACTGTTTGGAAGAGCAAGATTTGGCTCTGAAGAAATT GACATAATGAGAGAAGAACTGTGCAATCAGCGCATTGCTGTTGAAGAAGCCAGGGCATAT TCAACAGCATATTTGATCTGTGATGGTAGCAGTGAAGTTGAAACATGTCCAAATTCACGG ACTGATTTTGTCATAGTGCAAGCATCGAAGTCCCAACAGAGTTATTCAGGATATGAAGAT GAGGACCCGTCTTGTCAGTGTGCTGCATCCCCAAGGCAATTAGAAAGTCGCTCAATCCTG TCTTTACCTATTGGTGAGTGCAGTTTGTCACCGGTGGTTGATAACCCTAAAAAGTCTGAA GTTGTTATAGAGTCAGAATCAACAAATCATGCTGAAAGTTCAAACCTTTGCATGGTCAGA AGGGGTTATTCAGGATCTGAAGATGATTGTCAGCGTGCTGCATCCCCAAGGCAATTAGAA AAACTCTCAATCCGGTCTTCACCTATTGGTGAGTGCAGTTTGTCACCGGTGGCTGATAAA CCTGAAAAGTCTGAAGTTGTTATAGAGTCAGAATCAACAAATCTTGCTGAAAGTTCAAAC CTTTGCATGGTCAGAGGAGAAGAAACAACAGATTGTGAAAGGGGTACCTTGTGCGTTACT GGATCATCGAAATGCTTGAATGCAAGTTTGAAGAGGCTGTACAGATCAAGGAATGTCCCT GTCCCACGACCTCTCCCGTCCCTTGTTGGACTTTTGGAATCCACTAAACGGATGAAAATG CAACCTGGCAGTGATGGTAGTTCGTTGAATTCATGGCACACCTTACCTAGGAGATAA

Peptide Sequence

PEP ID	Os01t0881400-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:38257939:38261435:1 gene:Os01g0881400 transcript:Os01t0881400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA repair metallo-beta-lactamase domain containing protein. (Os01t0881400-00)
Sequence	MPIEMPRRLPFAVDTWGPSSRRRRHRFLTHAHRDHLVAAGGAADSGECPGAVYATRLTLD LALRHFPRLERGEFVEMEVGKTVVVDDPAGAFSVTAYDANHCPGAVMFLFEGQFGSILHT GDCRLTPDCVHNLPLKYIAKKGKENICRLDFVFLDCTFSKCFLKLPSKESAIQQVIACIW KHPHAPFVYLACDLLGHEEILIEVSRTFGSKIYVDKRRNSDCFRALSLIAPEIITEDPSC RFQILGFQNLYDKACTKIEEARASLQPEPLFIRPSTQWYAHCAQSQKPSLTEAVLDGCGV WHICFSIHSSRDELEQALELLQPQWVISTTPPCFAMELSYVKKKCFKTCLTADDPLWKIF KNPLRKSVSSPSTLLDSDTHTNEDHSISVDDDHDHSASPSGEECTDFDICTLELKFMPSP PVQEPDITLFGRARFGSEEIDIMREELCNQRIAVEEARAYSTAYLICDGSSEVETCPNSR TDFVIVQASKSQQSYSGYEDEDPSCQCAASPRQLESRSILSLPIGECSLSPVVDNPKKSE VVIESESTNHAESSNLCMVRRGYSGSEDDCQRAASPRQLEKLSIRSSPIGECSLSPVADK PEKSEVVIESESTNLAESSNLCMVRGEETTDCERGTLCVTGSSKCLNASLKRLYRSRNVP VPRPLPSLVGLLESTKRMKMQPGSDGSSLNSWHTLPRR

Transcript Sequence

Transcript ID	Os01t0881400-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:38257939:38261435:1 gene:Os01g0881400 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA repair metallo-beta-lactamase domain containing protein. (Os01t0881400-00)
Sequence	CCACCAAACGAGGCGGCGAGGTTCAGGGGAGCGGAGGACTGAACTGTAATTTCGGAAAGT TCTCGGGAGGATGCCGATAGAGATGCCGCGGCGGCTCCCCTTCGCCGTCGACACGTGGGG CCCCTCCTCCCGCCGCCGCCGCCACCGCTTCCTCACCCACGCGCACCGGGACCACCTCGT CGCCGCCGGCGGCGCCGCCGACTCCGGGGAATGCCCCGGCGCCGTCTACGCGACGCGGCT CACCCTCGACCTCGCCCTCCGCCATTTTCCCCGGCTTGAGCGGGGGGAGTTCGTGGAGAT GGAGGTGGGGAAGACGGTGGTGGTGGACGACCCCGCCGGGGCCTTCTCCGTCACGGCGTA CGACGCCAATCACTGCCCTGGGGCGGTTATGTTCTTGTTCGAGGGTCAATTCGGTAGCAT TCTGCACACGGGGGACTGTCGGCTGACGCCAGATTGTGTACATAATTTGCCACTGAAGTA CATAGCAAAGAAAGGGAAAGAAAACATTTGCCGTTTAGACTTTGTGTTCCTGGACTGCAC ATTTTCCAAATGCTTCCTCAAGCTACCAAGCAAGGAGTCAGCTATTCAGCAGGTTATAGC TTGCATATGGAAGCATCCTCATGCTCCATTTGTCTATCTTGCATGTGATCTTCTTGGTCA CGAAGAGATCCTAATTGAGGTGTCAAGGACATTTGGATCAAAGATTTATGTTGACAAGAG AAGGAACTCGGACTGTTTTCGAGCTCTATCTCTCATAGCCCCAGAAATCATCACTGAAGA TCCATCTTGTCGATTCCAGATTCTTGGATTCCAAAACTTGTATGACAAAGCATGTACAAA GATTGAAGAGGCAAGGGCTAGCCTTCAGCCTGAACCTCTATTTATCCGTCCCTCAACACA GTGGTATGCGCACTGTGCTCAAAGCCAGAAACCTAGCCTAACAGAAGCTGTGCTGGATGG TTGTGGGGTCTGGCACATTTGTTTCTCCATCCATTCCTCTCGTGATGAGTTAGAACAGGC CTTGGAACTTCTCCAGCCTCAATGGGTAATTTCAACAACACCACCATGCTTTGCCATGGA ATTGAGCTATGTAAAGAAAAAATGTTTCAAGACCTGCTTAACTGCTGATGATCCACTGTG GAAGATATTCAAGAATCCTCTCCGAAAGTCAGTGTCCTCCCCTTCTACATTGCTGGATTC CGACACGCACACAAATGAAGATCACTCGATTTCTGTCGATGATGATCATGATCATTCAGC CTCTCCTAGTGGTGAAGAATGTACAGACTTTGATATCTGCACGCTTGAACTGAAGTTCAT GCCATCCCCTCCAGTTCAGGAACCAGATATTACACTGTTTGGAAGAGCAAGATTTGGCTC TGAAGAAATTGACATAATGAGAGAAGAACTGTGCAATCAGCGCATTGCTGTTGAAGAAGC CAGGGCATATTCAACAGCATATTTGATCTGTGATGGTAGCAGTGAAGTTGAAACATGTCC AAATTCACGGACTGATTTTGTCATAGTGCAAGCATCGAAGTCCCAACAGAGTTATTCAGG ATATGAAGATGAGGACCCGTCTTGTCAGTGTGCTGCATCCCCAAGGCAATTAGAAAGTCG CTCAATCCTGTCTTTACCTATTGGTGAGTGCAGTTTGTCACCGGTGGTTGATAACCCTAA AAAGTCTGAAGTTGTTATAGAGTCAGAATCAACAAATCATGCTGAAAGTTCAAACCTTTG CATGGTCAGAAGGGGTTATTCAGGATCTGAAGATGATTGTCAGCGTGCTGCATCCCCAAG GCAATTAGAAAAACTCTCAATCCGGTCTTCACCTATTGGTGAGTGCAGTTTGTCACCGGT GGCTGATAAACCTGAAAAGTCTGAAGTTGTTATAGAGTCAGAATCAACAAATCTTGCTGA AAGTTCAAACCTTTGCATGGTCAGAGGAGAAGAAACAACAGATTGTGAAAGGGGTACCTT GTGCGTTACTGGATCATCGAAATGCTTGAATGCAAGTTTGAAGAGGCTGTACAGATCAAG GAATGTCCCTGTCCCACGACCTCTCCCGTCCCTTGTTGGACTTTTGGAATCCACTAAACG GATGAAAATGCAACCTGGCAGTGATGGTAGTTCGTTGAATTCATGGCACACCTTACCTAG GAGATAA