Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0880300-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:38206952:38211683:-1 gene:Os01g0880300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 7 description:Similar to Pectin methylesterase-like protein. (Os01t0880300-02)
Sequence	ATGTCGCCGCCGCCGCTTCGCCTCCTCCTCTTCCTCCTCCTGCTCCACCTCCCCTCCTCC CTCTCCTCGCGCCACCACCACCACGCCCCGTCGCCGTCCAAGCCGGCGCCGGCCTCCTAC GCGGCGCCGCTCGCCGTCCTCCTCGCTTGCAACGCCACGCGGTTCCAGCCCGCCTGCGTC TCCACGCTCTCCAACGCCTCCGCCGACGCGTCCACTCCGGACCTCCTCGCCGCCACGCTC TCCGCGCTCAGGGCCCGCATCCCGCCGGCCGTCTCCACGGCGCGGTCCGTCCTCGCCGCC TCCTCCAACGTCAACCTCACCAACGCCGCCACCAACTGCCTCACGTTCCTCTCCTTCTCC ACCCACCGCCTCTCGCCGCCGCCCTCGACGTCGTCGCCGTCGCTCCTCTCCGCCTCCACC GCGCTCCTCCACCTCTACGACTGCTGGTCCGCCTACAAGTACGTCAACTTCTCCCGCACC ATCTCCGACGCCATGGCCTACCTCGACGACACCATCGCCGTCAACAGCAACTACATCTCC ATGCTCGCCGCGCTGCAGCGCTACGGCGACGACACCTTCCGGTGGGCCCCGCCGCAGACC GAGCGCGACGGCTACTGGCCGCCCGCGGCGGCGGGGTCCGCCGCCGACGAGGACGCGCTC GGCGTGCCCAAGGGGCTCCCCCCCAACGTGACGGTGTGCGGCGCGGGGTGCCACTACAAG ACGGTGGGGGAGGCGGTGGCGGCGGCGCCGGACTACGGCGACGAGATGTTCGTGGTGCAC GTGAAGGAGGGGGTGTACAAGGAGACGGTGAACGTGCCGTTGGAGAAGACGAACGTGGTG GTCGTCGGGGACGGCATGGGGAAGACGGTCATCACCGGCGACCTCAACGCCGACACGCCG GGCGTCTCCACGTTCAACACGGCCACCGTAGGCGTGCTCGCGGACGGCTTCATGGCGCGC GACCTGACGATCTCCAACACGGCCGGGCCCGACGCGCACCAGGCGGTGGCGTTCCGGTCG ACGGGCGACCGCACGGTGCTGGACACGGTGGAGCTCCTGGGCCACCAGGACACGCTGTAC GCGCACGCCATGCGGCAGTTCTACACCCGGTGCCGCGTCTCTGGCACCGTCGACTTCGTC TTCGGCAACTCGGCCACCGTCCTCCGCGACACCGCCCTCATCGTCCTCCCGAGGCAGCTC CGCCCGGAGAAGGGCGAGAACGACGCCGTCACCGCGCAGGGGCGCACCGACCCGGCGCAG CCCACGGGGATCGTGCTCCGCGGCTGCGTCGTCAACGGCAGCGACGACTACATGGCGCTG TACAGGGAGAAGCCCGACGTGCACCACGTCTACCTGGGCCGGCCCTGGAAGGAGTACTCG CGCACGGTGTACGTCGGCTGCACGCTCTCCGAGATCGTGCAGCCGCGCGGGTGGATGGCG TGGAACGGCGACTTCGCGCTCAAGACGCTCTACTACGGCGAGTACGAGAGCGCCGGCCCC GGCGGCGACGGCGCCAGCGGGAGCAGGATCGGGTGGAGCAGCCAGGTGCCCAGGGACCAC GTCGACGTGTACAGCGTCGCCAGCTTCATACAGGGTGACAAGTGGATACCCAAAATACAT TAG

Peptide Sequence

PEP ID	Os01t0880300-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:38206952:38211683:-1 gene:Os01g0880300 transcript:Os01t0880300-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 7 description:Similar to Pectin methylesterase-like protein. (Os01t0880300-02)
Sequence	MSPPPLRLLLFLLLLHLPSSLSSRHHHHAPSPSKPAPASYAAPLAVLLACNATRFQPACV STLSNASADASTPDLLAATLSALRARIPPAVSTARSVLAASSNVNLTNAATNCLTFLSFS THRLSPPPSTSSPSLLSASTALLHLYDCWSAYKYVNFSRTISDAMAYLDDTIAVNSNYIS MLAALQRYGDDTFRWAPPQTERDGYWPPAAAGSAADEDALGVPKGLPPNVTVCGAGCHYK TVGEAVAAAPDYGDEMFVVHVKEGVYKETVNVPLEKTNVVVVGDGMGKTVITGDLNADTP GVSTFNTATVGVLADGFMARDLTISNTAGPDAHQAVAFRSTGDRTVLDTVELLGHQDTLY AHAMRQFYTRCRVSGTVDFVFGNSATVLRDTALIVLPRQLRPEKGENDAVTAQGRTDPAQ PTGIVLRGCVVNGSDDYMALYREKPDVHHVYLGRPWKEYSRTVYVGCTLSEIVQPRGWMA WNGDFALKTLYYGEYESAGPGGDGASGSRIGWSSQVPRDHVDVYSVASFIQGDKWIPKIH

Transcript Sequence

Transcript ID	Os01t0880300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:38206952:38211683:-1 gene:Os01g0880300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 7 description:Similar to Pectin methylesterase-like protein. (Os01t0880300-02)
Sequence	ACTCCACTCCATTTCCCACTCGACTCCATCCAGACATTGTCTCCAATGTCGCCGCCGCCG CTTCGCCTCCTCCTCTTCCTCCTCCTGCTCCACCTCCCCTCCTCCCTCTCCTCGCGCCAC CACCACCACGCCCCGTCGCCGTCCAAGCCGGCGCCGGCCTCCTACGCGGCGCCGCTCGCC GTCCTCCTCGCTTGCAACGCCACGCGGTTCCAGCCCGCCTGCGTCTCCACGCTCTCCAAC GCCTCCGCCGACGCGTCCACTCCGGACCTCCTCGCCGCCACGCTCTCCGCGCTCAGGGCC CGCATCCCGCCGGCCGTCTCCACGGCGCGGTCCGTCCTCGCCGCCTCCTCCAACGTCAAC CTCACCAACGCCGCCACCAACTGCCTCACGTTCCTCTCCTTCTCCACCCACCGCCTCTCG CCGCCGCCCTCGACGTCGTCGCCGTCGCTCCTCTCCGCCTCCACCGCGCTCCTCCACCTC TACGACTGCTGGTCCGCCTACAAGTACGTCAACTTCTCCCGCACCATCTCCGACGCCATG GCCTACCTCGACGACACCATCGCCGTCAACAGCAACTACATCTCCATGCTCGCCGCGCTG CAGCGCTACGGCGACGACACCTTCCGGTGGGCCCCGCCGCAGACCGAGCGCGACGGCTAC TGGCCGCCCGCGGCGGCGGGGTCCGCCGCCGACGAGGACGCGCTCGGCGTGCCCAAGGGG CTCCCCCCCAACGTGACGGTGTGCGGCGCGGGGTGCCACTACAAGACGGTGGGGGAGGCG GTGGCGGCGGCGCCGGACTACGGCGACGAGATGTTCGTGGTGCACGTGAAGGAGGGGGTG TACAAGGAGACGGTGAACGTGCCGTTGGAGAAGACGAACGTGGTGGTCGTCGGGGACGGC ATGGGGAAGACGGTCATCACCGGCGACCTCAACGCCGACACGCCGGGCGTCTCCACGTTC AACACGGCCACCGTAGGCGTGCTCGCGGACGGCTTCATGGCGCGCGACCTGACGATCTCC AACACGGCCGGGCCCGACGCGCACCAGGCGGTGGCGTTCCGGTCGACGGGCGACCGCACG GTGCTGGACACGGTGGAGCTCCTGGGCCACCAGGACACGCTGTACGCGCACGCCATGCGG CAGTTCTACACCCGGTGCCGCGTCTCTGGCACCGTCGACTTCGTCTTCGGCAACTCGGCC ACCGTCCTCCGCGACACCGCCCTCATCGTCCTCCCGAGGCAGCTCCGCCCGGAGAAGGGC GAGAACGACGCCGTCACCGCGCAGGGGCGCACCGACCCGGCGCAGCCCACGGGGATCGTG CTCCGCGGCTGCGTCGTCAACGGCAGCGACGACTACATGGCGCTGTACAGGGAGAAGCCC GACGTGCACCACGTCTACCTGGGCCGGCCCTGGAAGGAGTACTCGCGCACGGTGTACGTC GGCTGCACGCTCTCCGAGATCGTGCAGCCGCGCGGGTGGATGGCGTGGAACGGCGACTTC GCGCTCAAGACGCTCTACTACGGCGAGTACGAGAGCGCCGGCCCCGGCGGCGACGGCGCC AGCGGGAGCAGGATCGGGTGGAGCAGCCAGGTGCCCAGGGACCACGTCGACGTGTACAGC GTCGCCAGCTTCATACAGGGTGACAAGTGGATACCCAAAATACATTAGTTAGAGCAGCAT AAAAAGAAGTAAATGGTGGTCCATTGTGTGATCCCCTCGAATGAGATGGTGCCAAACTGC CAACGGCGTATAGCCATTTAACTGTGCAAACGCATTGTGCCGTGCATAATGTTTAATGAA AGGGTGGCCAAAGCCTTTTCCTTGATC