Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0879500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:38157319:38159782:-1 gene:Os01g0879500 gene_biotype:protein_coding transcript_biotype:protein_coding description:RuBisCO-cytochrome methylase, RMS1 domain containing protein. (Os01t0879500-01)
Sequence	ATGGAAGCTTCCGCCTCCACCTCCACCGCACGCCGCCTACGGGCCTTCAGGCGGTGGATG CGGGACCACGGCGTCGTCTGCAGCAACGCGCTCCGCCTCGACGCCGCCGAGGACGGTGGC GGCGGCGTCTACGTGCGCGCCCTCGCCGCGCTCCGGGAGGGGGACCTCGTGGCCACCATC CCGCGGGGCGCGTGCCTGACCCCGCGCACCTCCGGCGCCGCCGAGGCCATCGAGGCCGCG GAGCTCGGCGGGCCCCTCGCGCTCGCCGTCGCCGTCATGTATGAGCGCGCGCGCGGCGCC GAGTCGCCGTGGGACGCCTACCTCCGCCTGATCCCCGAGCGGGAGCCCGTGCCGCTCGTC TGGCCCGCCGATGAGGCCGAGCGCCTCCTGGCCGGCACCGAGCTCGATAAGATAGTGAAG CAAGACAGGCAGTTCATATGTGAGGACTGGAAAGAGTGTATTGAGCCACTCATTTTGTCA GGAGAACTTGAGGTTGACCCAGATGATTTTAGCCTGGAGAATTATTTCTCTGCTAAGAGT CTACTTTCGTCGAGGTCCTTCCGAATAGATAGCTATCATGGGTCTGGAATGGTTCCCCTG GCTGACCTTTTTAACCACAAGACTGGTGGGGAACATGTCCACTTCACTTCAGTGTTAGAA GCCTCGGACTCAGATAGTGAAGATGGTGAAGATCCAAACAATGCTTCTGCTGATGAACAG TCAACTATAGAAAATTCTGCCGACATCCCTTCAGGAGATGACGATGAAGATTTGGAAATG ATTGTTGTGAGAGATGTCAATGAAGGGGAGGAGGTTTTTAACACATACGGTACCATGGGA AATGCTGCTTTGCTTCATCGATATGGCTTCACAGAGATGGACAACTCATATGACATCGTC AACATCGACTTAGCTCTGGTTACTAAGTGGTGCTCTTCTAAGTACTCCCGTCGATATGCA AGAGCAAGGGTATCACTCTGGCATAATCTGGGCTATTCAGGTTGCACCAGCCAAGATGCT GACTACTTTGAGATTTCATATGATGGAGAGCCCCAGCTTGAACTTTTGATCCTGCTTTAT ATCATCTCCTTGAAGTCTGATGCTTATGACAAGCTGGCCAGCGTGGCTCATGATCTGATT GGTGATGATGAGGTCGACAGCATTAGTAGTGTGCTTAAGGTTGTCAGAGTAACAAGCTCC AATCAACATCCAGATATTAGCGGGCTTGAAAAATTGCCTGATGTTAAGAAGCTATTGCTT AATGAGAGCGTTTGTTCTGCACTTGTATCCCTTGTTGACATGAGGGAGAGCCTCTATGGT TCAAACACTTTGGAAGATGACAGGCAAAAACTGCAAGCATGCTCTTCTGTCAACGAAAGG AATCTCTATCATTCTTTGGTGCTGCGGGTGAGCGAGAGAACAATACTTCACAAATTGAAG AAACATGCATCTAGTTGGTCAAAGACCAAGAAGAGGAAACAGCTCTAG

Peptide Sequence

PEP ID	Os01t0879500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:38157319:38159782:-1 gene:Os01g0879500 transcript:Os01t0879500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RuBisCO-cytochrome methylase, RMS1 domain containing protein. (Os01t0879500-01)
Sequence	MEASASTSTARRLRAFRRWMRDHGVVCSNALRLDAAEDGGGGVYVRALAALREGDLVATI PRGACLTPRTSGAAEAIEAAELGGPLALAVAVMYERARGAESPWDAYLRLIPEREPVPLV WPADEAERLLAGTELDKIVKQDRQFICEDWKECIEPLILSGELEVDPDDFSLENYFSAKS LLSSRSFRIDSYHGSGMVPLADLFNHKTGGEHVHFTSVLEASDSDSEDGEDPNNASADEQ STIENSADIPSGDDDEDLEMIVVRDVNEGEEVFNTYGTMGNAALLHRYGFTEMDNSYDIV NIDLALVTKWCSSKYSRRYARARVSLWHNLGYSGCTSQDADYFEISYDGEPQLELLILLY IISLKSDAYDKLASVAHDLIGDDEVDSISSVLKVVRVTSSNQHPDISGLEKLPDVKKLLL NESVCSALVSLVDMRESLYGSNTLEDDRQKLQACSSVNERNLYHSLVLRVSERTILHKLK KHASSWSKTKKRKQL

Transcript Sequence

Transcript ID	Os01t0879500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:38157319:38159782:-1 gene:Os01g0879500 gene_biotype:protein_coding transcript_biotype:protein_coding description:RuBisCO-cytochrome methylase, RMS1 domain containing protein. (Os01t0879500-01)
Sequence	GCCGCCAGCCATGGAAGCTTCCGCCTCCACCTCCACCGCACGCCGCCTACGGGCCTTCAG GCGGTGGATGCGGGACCACGGCGTCGTCTGCAGCAACGCGCTCCGCCTCGACGCCGCCGA GGACGGTGGCGGCGGCGTCTACGTGCGCGCCCTCGCCGCGCTCCGGGAGGGGGACCTCGT GGCCACCATCCCGCGGGGCGCGTGCCTGACCCCGCGCACCTCCGGCGCCGCCGAGGCCAT CGAGGCCGCGGAGCTCGGCGGGCCCCTCGCGCTCGCCGTCGCCGTCATGTATGAGCGCGC GCGCGGCGCCGAGTCGCCGTGGGACGCCTACCTCCGCCTGATCCCCGAGCGGGAGCCCGT GCCGCTCGTCTGGCCCGCCGATGAGGCCGAGCGCCTCCTGGCCGGCACCGAGCTCGATAA GATAGTGAAGCAAGACAGGCAGTTCATATGTGAGGACTGGAAAGAGTGTATTGAGCCACT CATTTTGTCAGGAGAACTTGAGGTTGACCCAGATGATTTTAGCCTGGAGAATTATTTCTC TGCTAAGAGTCTACTTTCGTCGAGGTCCTTCCGAATAGATAGCTATCATGGGTCTGGAAT GGTTCCCCTGGCTGACCTTTTTAACCACAAGACTGGTGGGGAACATGTCCACTTCACTTC AGTGTTAGAAGCCTCGGACTCAGATAGTGAAGATGGTGAAGATCCAAACAATGCTTCTGC TGATGAACAGTCAACTATAGAAAATTCTGCCGACATCCCTTCAGGAGATGACGATGAAGA TTTGGAAATGATTGTTGTGAGAGATGTCAATGAAGGGGAGGAGGTTTTTAACACATACGG TACCATGGGAAATGCTGCTTTGCTTCATCGATATGGCTTCACAGAGATGGACAACTCATA TGACATCGTCAACATCGACTTAGCTCTGGTTACTAAGTGGTGCTCTTCTAAGTACTCCCG TCGATATGCAAGAGCAAGGGTATCACTCTGGCATAATCTGGGCTATTCAGGTTGCACCAG CCAAGATGCTGACTACTTTGAGATTTCATATGATGGAGAGCCCCAGCTTGAACTTTTGAT CCTGCTTTATATCATCTCCTTGAAGTCTGATGCTTATGACAAGCTGGCCAGCGTGGCTCA TGATCTGATTGGTGATGATGAGGTCGACAGCATTAGTAGTGTGCTTAAGGTTGTCAGAGT AACAAGCTCCAATCAACATCCAGATATTAGCGGGCTTGAAAAATTGCCTGATGTTAAGAA GCTATTGCTTAATGAGAGCGTTTGTTCTGCACTTGTATCCCTTGTTGACATGAGGGAGAG CCTCTATGGTTCAAACACTTTGGAAGATGACAGGCAAAAACTGCAAGCATGCTCTTCTGT CAACGAAAGGAATCTCTATCATTCTTTGGTGCTGCGGGTGAGCGAGAGAACAATACTTCA CAAATTGAAGAAACATGCATCTAGTTGGTCAAAGACCAAGAAGAGGAAACAGCTCTAGCT ATTTTGGGGAAATGATGTTATATTATGGCACTGGTACTCAACATATACTGCTTAAAATTT TGCTTTAGCAATTAACAGGCAGTTTTTGTTTTTCCCAATCTGGTAGATTCTTAAGCGGTA GATCACCAACGGAATTTATCCGAGTCATTTGTTGTTCTTTTGTTAATGCTGTGATCTGTT GTTCCATGTCAATTCTTTCTGAGGTTGACAATATTTTGACATGACTTAAGTACT