Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0879400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:38154147:38156987:1 gene:Os01g0879400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 43 protein. (Os01t0879400-01)
Sequence	ATGAGGATTAATAATGGGAGAATGAAGATGAGGAACAAACAACGGAAATCATCTGCTCTC AACTTTGATGCAGGATGCCGATCTTCCTTGTCTTTTATTGTATGGAGCTTGGTGGGAGTT GCCCTCATTGTTTGCTTCTTTTCTGTTGTCCGTCAAGCAGACACTAGGCAGAACCATATT TATTTCAGACATCTATCTGCTACCAGAGAGTTAGAAGAGATTGAGGAGGAACATTTCCGC TTGCCACCTCCTCACAAGGTTAATCCTCGTGCAGTGAAACGGCGGGGGCCTCGCAAGGCT CCAAAGGTTATTGATCAATATCTGGATGAGTCATCAGCAGTGCATGCCTTGTTCTTCCCT GATGAAAGAAGTGCAGTGAACCCAACAAAAGGTGGAAATGACAGTATGTACTTCTATCCT GGTAGGGTGTGGCTGGACACTGATGGACATGCCATTCAAGCCCATGGGGGTGGTATTCTG TATGATCATATCACTGCCAAATACTACTGGTATGGAGAAAACAAAGATGGGCTAACCTAC CAAACTCACCCCAAGAGTACATATCGGGTTGACATTATTGGGGTAAGCTGCTACTCATCA AAGGACCTATGGTCATGGACTAATGAAGGAATTGTGCTTCCTGGAGAACCTACTAATTTC ACCCATGACCTTCATAAATCTAAGGTGCTTGAGAGACCTAAGGTGATATATAATGATCAT ACTGGACAATATGTCATGTGGATGCATATTGATGATGCAAACTACACCAAAGCATCTGTT GGTGTAGCAGTCAGCAACTCTCCCACTGGTCCTTTCACCTACCTCTATAGCTTTCGCCCA CATGGATTTGAAAGTAGAGACATGACAATCTTCAAAGATGATGATGGGTCGGCTTACCTC TTCTACTCTTCTCGTGACAATACTGAGCTTCATGTCAGTCCATTGACAAAGGACTATCTT AATATCACGGTAGCAATGAGGAGAATATTAATAAGACGGCATAGGGAAGCTCCGGCTGTC TTCAAGCTTCAAGGAACCTACTACATGATCACCTCTGGTTGCTCGGGTTGGGCTCCTAAT AGAGCATTAGCGCATGCTGCAGAATCGATCATGGGCCCATGGGAGACATTGGGCAACCCA TGTGTTGGAGGCAACAGGTTTTTCCGGTTGACAACATTCTTATCTCAAAGCACATTTGTG CTTCCCCTCCCTGGCTTGCCTGGTACATTCATCTTCATGGCAGACAGGTGGAATCCTTCA AACTTGAAAGATTCTCGGTATGTTTGGTTACCTCTGTTCATTGGGGGATTGGCAGACGAA CCGTTGGATTACAGTTTTGGATTCCCGGCATGGTCGAGGGTGTCCATTTATTGGCACAGG AAATGGCGCCTACCTGAAAGTTGGAAGGGTTATACCTGA

Peptide Sequence

PEP ID	Os01t0879400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:38154147:38156987:1 gene:Os01g0879400 transcript:Os01t0879400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 43 protein. (Os01t0879400-01)
Sequence	MRINNGRMKMRNKQRKSSALNFDAGCRSSLSFIVWSLVGVALIVCFFSVVRQADTRQNHI YFRHLSATRELEEIEEEHFRLPPPHKVNPRAVKRRGPRKAPKVIDQYLDESSAVHALFFP DERSAVNPTKGGNDSMYFYPGRVWLDTDGHAIQAHGGGILYDHITAKYYWYGENKDGLTY QTHPKSTYRVDIIGVSCYSSKDLWSWTNEGIVLPGEPTNFTHDLHKSKVLERPKVIYNDH TGQYVMWMHIDDANYTKASVGVAVSNSPTGPFTYLYSFRPHGFESRDMTIFKDDDGSAYL FYSSRDNTELHVSPLTKDYLNITVAMRRILIRRHREAPAVFKLQGTYYMITSGCSGWAPN RALAHAAESIMGPWETLGNPCVGGNRFFRLTTFLSQSTFVLPLPGLPGTFIFMADRWNPS NLKDSRYVWLPLFIGGLADEPLDYSFGFPAWSRVSIYWHRKWRLPESWKGYT

Transcript Sequence

Transcript ID	Os01t0879400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:38154147:38156987:1 gene:Os01g0879400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 43 protein. (Os01t0879400-01)
Sequence	GCCTTCCCCACCTGCCGCTACCCCACGCCCCCTTCCTCTCCAGGTCTCCCCCCTCCCCTT GTGCGACTTGTGTCGAACACCGCAGCCGCCACCCGTAGACGCGACCTCAGCAACCCCACC CACTTCCTCTCCGTGGGCGCCCGCCGCGCGTCTTGCCCCCAGATCCGGCGCCCACCCCAG CTTTCTTATGAGGATTAATAATGGGAGAATGAAGATGAGGAACAAACAACGGAAATCATC TGCTCTCAACTTTGATGCAGGATGCCGATCTTCCTTGTCTTTTATTGTATGGAGCTTGGT GGGAGTTGCCCTCATTGTTTGCTTCTTTTCTGTTGTCCGTCAAGCAGACACTAGGCAGAA CCATATTTATTTCAGACATCTATCTGCTACCAGAGAGTTAGAAGAGATTGAGGAGGAACA TTTCCGCTTGCCACCTCCTCACAAGGTTAATCCTCGTGCAGTGAAACGGCGGGGGCCTCG CAAGGCTCCAAAGGTTATTGATCAATATCTGGATGAGTCATCAGCAGTGCATGCCTTGTT CTTCCCTGATGAAAGAAGTGCAGTGAACCCAACAAAAGGTGGAAATGACAGTATGTACTT CTATCCTGGTAGGGTGTGGCTGGACACTGATGGACATGCCATTCAAGCCCATGGGGGTGG TATTCTGTATGATCATATCACTGCCAAATACTACTGGTATGGAGAAAACAAAGATGGGCT AACCTACCAAACTCACCCCAAGAGTACATATCGGGTTGACATTATTGGGGTAAGCTGCTA CTCATCAAAGGACCTATGGTCATGGACTAATGAAGGAATTGTGCTTCCTGGAGAACCTAC TAATTTCACCCATGACCTTCATAAATCTAAGGTGCTTGAGAGACCTAAGGTGATATATAA TGATCATACTGGACAATATGTCATGTGGATGCATATTGATGATGCAAACTACACCAAAGC ATCTGTTGGTGTAGCAGTCAGCAACTCTCCCACTGGTCCTTTCACCTACCTCTATAGCTT TCGCCCACATGGATTTGAAAGTAGAGACATGACAATCTTCAAAGATGATGATGGGTCGGC TTACCTCTTCTACTCTTCTCGTGACAATACTGAGCTTCATGTCAGTCCATTGACAAAGGA CTATCTTAATATCACGGTAGCAATGAGGAGAATATTAATAAGACGGCATAGGGAAGCTCC GGCTGTCTTCAAGCTTCAAGGAACCTACTACATGATCACCTCTGGTTGCTCGGGTTGGGC TCCTAATAGAGCATTAGCGCATGCTGCAGAATCGATCATGGGCCCATGGGAGACATTGGG CAACCCATGTGTTGGAGGCAACAGGTTTTTCCGGTTGACAACATTCTTATCTCAAAGCAC ATTTGTGCTTCCCCTCCCTGGCTTGCCTGGTACATTCATCTTCATGGCAGACAGGTGGAA TCCTTCAAACTTGAAAGATTCTCGGTATGTTTGGTTACCTCTGTTCATTGGGGGATTGGC AGACGAACCGTTGGATTACAGTTTTGGATTCCCGGCATGGTCGAGGGTGTCCATTTATTG GCACAGGAAATGGCGCCTACCTGAAAGTTGGAAGGGTTATACCTGAATTTTGCCCTACGC ACATGAAGTACATACAAAAATTACAGATGATAGATGCAATCATGGAACAGACATAGTTTG AAGAGTTTGGTGATTGTTCCGAATATTTCTTGAGATATCTAGTCAGTGCTTTCGTAGGCC TTTTTGTAACGCAAAAATAGTCTGTCAAGAAAAATTGTATAACAGTGCAGCTCTCAAAAC AAATATTTGACTTGCTGTAACATCCTCCAAAAAGAAAGTTG