Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0878900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:38144793:38146141:-1 gene:Os01g0878900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 4,5-DOPA dioxygenase extradiol-like protein. (Os01t0878900-01)
Sequence	ATGGACACCTTCTTCCTATCGCACGGCACGCCCACGCTCTCCATCGACGACACGATGCCG GCGCAGCACTTCTTCAGGTCGTGGCTACCGGCGGCGGTGGCGGGCGCGCAGCCTCCGCGT GCCATCCTCATCGTGTCGGGCCACTGGGAGACGGCCACGCCGACCGTCAACGTCGTCCGC GGCAACAATGACACCATCCACGACTTCGAGGGCTATGGCTTCCCCAAGTCCATGTTCCAG CTGGAATACCCGGCGCCGGGCGCCCCTGATGTGGCGAAGAAGGCCAAAGAGCTCTTGGAG CAAGCCGGATTTGGGCCGGTGAAGGAGGACCACGGCCGCGGGCTTGACCACGGCGCGTGG GTGCCACTGATGTTCATGTACCCGGAGGCGAACGTGCCGGTGTGCCAGCTCTCCCTGCAG ACCGGCCGCGACGGCGCGTACCACTACGATCTCGGCAGAGCGCTGGCGCCTCTCCGGGAC GACGGCGTCCTCATCCTCGGCTCCGGCAACGCCACGCACAACCTTAGCTGCATGGCGCCC GTCGCCGAGGGCACGCCGGTGCCCCAGTGGGCGGCGGAGTTCGACGGGTGGCTGCAGGAG GCGCTCCTCGCGGGCGGGAGGCACGACGACGTGAAGCAGTACGAGGAGAAGGCGCCGAAC GGTAAGATGGCGCACCCGTCGCCGGACCACTTCCTCCCGCTGCACGTCGCGCTCGGCGCC GCCGGGGAGGATGCCAAGGCGGAGCTGATCCACCATAGCTGGTACAACGCGACGCTCTCC CACGCGTCGTACCGCTTCACCACCACCACCAAGAACAAACCGATTGCCGCATGCAAAGAG TGA

Peptide Sequence

PEP ID	Os01t0878900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:38144793:38146141:-1 gene:Os01g0878900 transcript:Os01t0878900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 4,5-DOPA dioxygenase extradiol-like protein. (Os01t0878900-01)
Sequence	MDTFFLSHGTPTLSIDDTMPAQHFFRSWLPAAVAGAQPPRAILIVSGHWETATPTVNVVR GNNDTIHDFEGYGFPKSMFQLEYPAPGAPDVAKKAKELLEQAGFGPVKEDHGRGLDHGAW VPLMFMYPEANVPVCQLSLQTGRDGAYHYDLGRALAPLRDDGVLILGSGNATHNLSCMAP VAEGTPVPQWAAEFDGWLQEALLAGGRHDDVKQYEEKAPNGKMAHPSPDHFLPLHVALGA AGEDAKAELIHHSWYNATLSHASYRFTTTTKNKPIAACKE

Transcript Sequence

Transcript ID	Os01t0878900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:38144793:38146141:-1 gene:Os01g0878900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 4,5-DOPA dioxygenase extradiol-like protein. (Os01t0878900-01)
Sequence	CAAGCCCAACCCGGCCGGCAGCACACGCGACGCGCGCGCCGACGCGACCACACCGACACC GACGCGGCCGGCGAGATAAGATAAGCAGCTAGCAGGGAGTGGCCTCCGAAACCGAGAGGA CGAGGAGTACACAACGTACGGGACTACGGGGCGCGGGGGCCATGGACACCTTCTTCCTAT CGCACGGCACGCCCACGCTCTCCATCGACGACACGATGCCGGCGCAGCACTTCTTCAGGT CGTGGCTACCGGCGGCGGTGGCGGGCGCGCAGCCTCCGCGTGCCATCCTCATCGTGTCGG GCCACTGGGAGACGGCCACGCCGACCGTCAACGTCGTCCGCGGCAACAATGACACCATCC ACGACTTCGAGGGCTATGGCTTCCCCAAGTCCATGTTCCAGCTGGAATACCCGGCGCCGG GCGCCCCTGATGTGGCGAAGAAGGCCAAAGAGCTCTTGGAGCAAGCCGGATTTGGGCCGG TGAAGGAGGACCACGGCCGCGGGCTTGACCACGGCGCGTGGGTGCCACTGATGTTCATGT ACCCGGAGGCGAACGTGCCGGTGTGCCAGCTCTCCCTGCAGACCGGCCGCGACGGCGCGT ACCACTACGATCTCGGCAGAGCGCTGGCGCCTCTCCGGGACGACGGCGTCCTCATCCTCG GCTCCGGCAACGCCACGCACAACCTTAGCTGCATGGCGCCCGTCGCCGAGGGCACGCCGG TGCCCCAGTGGGCGGCGGAGTTCGACGGGTGGCTGCAGGAGGCGCTCCTCGCGGGCGGGA GGCACGACGACGTGAAGCAGTACGAGGAGAAGGCGCCGAACGGTAAGATGGCGCACCCGT CGCCGGACCACTTCCTCCCGCTGCACGTCGCGCTCGGCGCCGCCGGGGAGGATGCCAAGG CGGAGCTGATCCACCATAGCTGGTACAACGCGACGCTCTCCCACGCGTCGTACCGCTTCA CCACCACCACCAAGAACAAACCGATTGCCGCATGCAAAGAGTGAAACATGTCTTGCTTAT ATCATCGCCATTTTACTCTTAACAATTAATAATCTCCGTGGGATCTACGTTAATATACTC CTATTAACGTAGACGTACGTTCGTGCCTGTATTTCCTAACGGCCGTGTCTTGTGGTTTTC AGTTGCAATAAACTTGCATGCATGGTGGTTTGGGTTGTGGCCCAGCCTCTCATGGCGTTG ATATC