Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0878800-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:38139227:38142580:-1 gene:Os01g0878800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 4,5-DOPA dioxygenase extradiol. (Os01t0878800-01);Similar to 4,5-DOPA dioxygenase extradiol. (Os01t0878800-02)
Sequence	ATGGACACCTTCTTCCTGTCGCACGGCGCGCCCACGCTGTCCATCGACGACACCATCGCG GCGCAGGGATTCTTCAAGTCGTGGCTGCCGGCGGCGGTGGCGGGCGCGGAGTTGCCGCGG GCGATCCTCGTCGTGTCGGGCCACTGGGAGGCGGCCGCGCCGACGGTCAACGTCATCCGC GGCAACAACGACACCATCCACGACTTCTACGGCTTCCCCAAGGCTATGTACAAGCTGAAG TACCCTGCGCCGGGCGCTCCTGATCTGGCGATGAAGACCAAGGAGCTTCTGGAGCAAGCC GGGTTCGGGCCGGTGAAGGAAAACCACAGCCGCGGGCTTGACCACGGTGCGTGGGTGCCA CTGATGTTCATGTACCCGGAGGCGAACGTGCCGGTGTGCCAGCTCTCCCTGCAGAGCGGC CGCGACGGCGCGTACCACTACGAGCTCGGCAGGGCGCTGGCGCCGCTCCGCGACGACGGC GTCCTCGTCCTCGGCTCCGGCAGCGCGACACACAACCTCCGCAGGATGGGGCCCGAGGGC ACGCCGGTGCCGCAGTGGGCGGCGGAGTTCGACGGGTGGCTGCAGGAGGCGCTGCTCGGC GGGAGGCACGACGACGTGAAGCGGTACGAGGAGAAGGCGCCGCACGGCAGGGTGGCGCAC CCGTCGCCTGACCACTTCCTCCCGCTGCACGTCGCGCTCGGCGCCGCCGGTGAGGGGGCC AAGGCGGAGCTGATCCACCGCAGCTGGAGCAACGCCTCGCTCTCCTACGCCTCGTACCGC TTCACCACCGCCAAGAACTGA

Peptide Sequence

PEP ID	Os01t0878800-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:38139227:38142580:-1 gene:Os01g0878800 transcript:Os01t0878800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 4,5-DOPA dioxygenase extradiol. (Os01t0878800-01);Similar to 4,5-DOPA dioxygenase extradiol. (Os01t0878800-02)
Sequence	MDTFFLSHGAPTLSIDDTIAAQGFFKSWLPAAVAGAELPRAILVVSGHWEAAAPTVNVIR GNNDTIHDFYGFPKAMYKLKYPAPGAPDLAMKTKELLEQAGFGPVKENHSRGLDHGAWVP LMFMYPEANVPVCQLSLQSGRDGAYHYELGRALAPLRDDGVLVLGSGSATHNLRRMGPEG TPVPQWAAEFDGWLQEALLGGRHDDVKRYEEKAPHGRVAHPSPDHFLPLHVALGAAGEGA KAELIHRSWSNASLSYASYRFTTAKN

Transcript Sequence

Transcript ID	Os01t0878800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:38139227:38142580:-1 gene:Os01g0878800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 4,5-DOPA dioxygenase extradiol. (Os01t0878800-01);Similar to 4,5-DOPA dioxygenase extradiol. (Os01t0878800-02)
Sequence	AAAGCAAGCAGCCCAGCCCGGCGGCCGCGGTGCACGCGCGCGCGACGACCACGCCGACGC CGACGCCGGGGGAAGACGAGCAGCAGGGGAGCGCCCTCGAAGCCGAGAGGAGGGGGAGGA GGAGGACGACGACGAGGCGCGCGGCGGAGGGCGCCATGGACACCTTCTTCCTGTCGCACG GCGCGCCCACGCTGTCCATCGACGACACCATCGCGGCGCAGGGATTCTTCAAGTCGTGGC TGCCGGCGGCGGTGGCGGGCGCGGAGTTGCCGCGGGCGATCCTCGTCGTGTCGGGCCACT GGGAGGCGGCCGCGCCGACGGTCAACGTCATCCGCGGCAACAACGACACCATCCACGACT TCTACGGCTTCCCCAAGGCTATGTACAAGCTGAAGTACCCTGCGCCGGGCGCTCCTGATC TGGCGATGAAGACCAAGGAGCTTCTGGAGCAAGCCGGGTTCGGGCCGGTGAAGGAAAACC ACAGCCGCGGGCTTGACCACGGTGCGTGGGTGCCACTGATGTTCATGTACCCGGAGGCGA ACGTGCCGGTGTGCCAGCTCTCCCTGCAGAGCGGCCGCGACGGCGCGTACCACTACGAGC TCGGCAGGGCGCTGGCGCCGCTCCGCGACGACGGCGTCCTCGTCCTCGGCTCCGGCAGCG CGACACACAACCTCCGCAGGATGGGGCCCGAGGGCACGCCGGTGCCGCAGTGGGCGGCGG AGTTCGACGGGTGGCTGCAGGAGGCGCTGCTCGGCGGGAGGCACGACGACGTGAAGCGGT ACGAGGAGAAGGCGCCGCACGGCAGGGTGGCGCACCCGTCGCCTGACCACTTCCTCCCGC TGCACGTCGCGCTCGGCGCCGCCGGTGAGGGGGCCAAGGCGGAGCTGATCCACCGCAGCT GGAGCAACGCCTCGCTCTCCTACGCCTCGTACCGCTTCACCACCGCCAAGAACTGAAAAC CGGTCGACGCGATGCACGCCGGCTCGCCGCATGCAACCACGTGTTTGCTTGTAACATATT TGACTCGAACAATAATCCCCGTGGGCTCACGTAGACGTGTGTGCCGTGTTCGTGTTTGTA TTTCTCGGAGCCGTGGCTTGGGGTTGTTTACTTGTTTTTTTTTTTGTAAGATTGGGTTGG GCCTGGGCCTGGGCCTGGGCCGTGGCACAGCCTTATGGCGTTAATTGGTGTTCTTATTTG G