Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0875800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:38012799:38014299:-1 gene:Os01g0875800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF266, plant family protein. (Os01t0875800-01)
Sequence

ATGAAGGCCGCCATGGCTGATGAATTCAAGATTGTGCTCACGAGGAAGGAGAGGTTCCTC
TACCTCGCCAAAGCCGTCGTGTTCCTTGTGATCTTCGCGCTCGGCGTGGTCGCCGGCCTA
TGGACGGCCACCGGGCCTCGCCGGTGCTGCAGCACATACACCAACATTCTTTTCCCGAGC
ACCACCGTGTACCGCTACCGCGGCGGCGGCGGCGGTAGCTTCTCGGAGTTCGTGGCTCCG
ACGCGGCTCATGCACGATATGACGGACGAGCAGCTGTTCTGGCGCGCTACGATGGCGCCG
GCGTCGTCCGGTGGCGCGTACCCGTTCCAGCGCGTGCCCAAGGTGGCCTTCATGTTCCTC
GCCGGCCGCGGCGTCCTGCCGCTGGCGCCGCTCTGGGAGCGATTCTTCCGTGGACACGAG
GGCCTCTTCTCCATCTACGTCCACGCGCCGCCCGGGATGGTGCTCAACGTGTCCGACGAC
TCGCCGTTCTACGGCCGGCAGATCCCCAGCCAGGAAACCTCATGGGGATCCATAACACTC
ATGGACGCCGAGAAGCGGCTGCTGGCGAACGCGCTGCTGGACTTCTCCAACGATCGGTTC
GTCCTCCTCTCCGAGAGCTGCATACCGGTGCAGAGCTTCCCGGTGGCGTACGGCTACCTC
ACCGGCTCGCGCCACAGCTTCGTGGAGGTCTACTACCACAAGGGCAAGACGTGCCGCGGC
CGGTACAGCCGCCGCATGGAGCCGGACATCACGCTGCCGCAGTGGAGGAAGGGCTCCCAG
TGGTTCGAGCTCAGGCGAGACCTCGCCGTGGCCGCCCTGACGGACGCCAGGTACTACCCG
CTCTTCCGGCGGCACTGCCGGCCGTCGTGCTACCCCGACGAGCACTACCTCCCGACGTTC
GTCGCCATGCTCCACGGCGCGGACAACTCGAACCGCACCGTGACGTACGTCGACTGGTCC
AGAGGCGGCGCGCACCCGGCGACGTACACCGCCGGCGACGTCACGCCGGAGCTGATCCTG
AGCATCAGGAGGAGCGAGGTGCCCTGCATGTACAACTCCCGGCCGACCACGGCGTGCTTC
CTGTTCGCGAGGAAGTTCTCCGCCGACGCGCTGGAGCCGCTGCTCAACATCTCATCGACG
GTGATGCAGTACTAG

Peptide Sequence

PEP ID

Os01t0875800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:38012799:38014299:-1 gene:Os01g0875800 transcript:Os01t0875800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF266, plant family protein. (Os01t0875800-01)
Sequence

MKAAMADEFKIVLTRKERFLYLAKAVVFLVIFALGVVAGLWTATGPRRCCSTYTNILFPS
TTVYRYRGGGGGSFSEFVAPTRLMHDMTDEQLFWRATMAPASSGGAYPFQRVPKVAFMFL
AGRGVLPLAPLWERFFRGHEGLFSIYVHAPPGMVLNVSDDSPFYGRQIPSQETSWGSITL
MDAEKRLLANALLDFSNDRFVLLSESCIPVQSFPVAYGYLTGSRHSFVEVYYHKGKTCRG
RYSRRMEPDITLPQWRKGSQWFELRRDLAVAALTDARYYPLFRRHCRPSCYPDEHYLPTF
VAMLHGADNSNRTVTYVDWSRGGAHPATYTAGDVTPELILSIRRSEVPCMYNSRPTTACF
LFARKFSADALEPLLNISSTVMQY

Transcript Sequence

Transcript ID

Os01t0875800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:38012799:38014299:-1 gene:Os01g0875800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF266, plant family protein. (Os01t0875800-01)
Sequence

AAGCAGAAGCAGCTGTACTTTGAACTGGCCATAGTGTAGTTTGATTCACTCTTTGATAGC
TTTTGCCGTTTAGCTAATTGTACAGTGTTGTACGTCTGCATTTTGTTGCATTCCACTGTG
ACAAGCATGAAGGCCGCCATGGCTGATGAATTCAAGATTGTGCTCACGAGGAAGGAGAGG
TTCCTCTACCTCGCCAAAGCCGTCGTGTTCCTTGTGATCTTCGCGCTCGGCGTGGTCGCC
GGCCTATGGACGGCCACCGGGCCTCGCCGGTGCTGCAGCACATACACCAACATTCTTTTC
CCGAGCACCACCGTGTACCGCTACCGCGGCGGCGGCGGCGGTAGCTTCTCGGAGTTCGTG
GCTCCGACGCGGCTCATGCACGATATGACGGACGAGCAGCTGTTCTGGCGCGCTACGATG
GCGCCGGCGTCGTCCGGTGGCGCGTACCCGTTCCAGCGCGTGCCCAAGGTGGCCTTCATG
TTCCTCGCCGGCCGCGGCGTCCTGCCGCTGGCGCCGCTCTGGGAGCGATTCTTCCGTGGA
CACGAGGGCCTCTTCTCCATCTACGTCCACGCGCCGCCCGGGATGGTGCTCAACGTGTCC
GACGACTCGCCGTTCTACGGCCGGCAGATCCCCAGCCAGGAAACCTCATGGGGATCCATA
ACACTCATGGACGCCGAGAAGCGGCTGCTGGCGAACGCGCTGCTGGACTTCTCCAACGAT
CGGTTCGTCCTCCTCTCCGAGAGCTGCATACCGGTGCAGAGCTTCCCGGTGGCGTACGGC
TACCTCACCGGCTCGCGCCACAGCTTCGTGGAGGTCTACTACCACAAGGGCAAGACGTGC
CGCGGCCGGTACAGCCGCCGCATGGAGCCGGACATCACGCTGCCGCAGTGGAGGAAGGGC
TCCCAGTGGTTCGAGCTCAGGCGAGACCTCGCCGTGGCCGCCCTGACGGACGCCAGGTAC
TACCCGCTCTTCCGGCGGCACTGCCGGCCGTCGTGCTACCCCGACGAGCACTACCTCCCG
ACGTTCGTCGCCATGCTCCACGGCGCGGACAACTCGAACCGCACCGTGACGTACGTCGAC
TGGTCCAGAGGCGGCGCGCACCCGGCGACGTACACCGCCGGCGACGTCACGCCGGAGCTG
ATCCTGAGCATCAGGAGGAGCGAGGTGCCCTGCATGTACAACTCCCGGCCGACCACGGCG
TGCTTCCTGTTCGCGAGGAAGTTCTCCGCCGACGCGCTGGAGCCGCTGCTCAACATCTCA
TCGACGGTGATGCAGTACTAGTTCTCCTCGCCGCCAACTATTGTTTGTAACATAGGATTT
CACACAACATATTCAGGTACCAATTGTACCTGTCAAGCAAAAGGGGAAAAAGAAGAAGAA
AGTGTTCATTTTGCGGG