Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0875500-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:37994738:38001584:1 gene:Os01g0875500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GALACTOSIDASE 4 description:Similar to Beta-galactosidase (EC 3.2.1.23). (Os01t0875500-01);Similar to cDNA clone:J033105C09, full insert sequence. (Os01t0875500-02)
Sequence	GCTCATACGCCGTATCGACCACCACCCTCGACGGCGGCCATGGCGGGCGCCTCCTCCTAC TTCTCGTTGCGGAGGCTACTCCTCCTGCTGCTGCCGCTGGTACCGTTGCTCGGCGCCACC ACCGCCGCCGCAGCGGGCGCCAACTCGAGCGTCACGTATGACCACCGCTCCCTCATCATC TCCGGCCGCCGCCGCCTCCTCATCTCCACCTCCATCCACTACCCCCGCAGCGTCCCCGAG ATGTGGCCGAAGCTGGTGGCCGAGGCCAAGGACGGCGGCGCCGACTGCGTCGAGACCTAC GTGTTCTGGAACGGCCACGAGCCCGCCCAGGGCCAGTACTACTTCGAGGAGCGGTTCGAT TTGGTGCGATTCGCGAAGATCGTCAAGGACGCCGGGCTGTACATGATCCTGCGCATTGGG CCGTTCGTCGCCGCAGAATGGACCTTCGGGGGCGTGCCGGTGTGGCTGCATTACGCGCCC GGGACGGTGTTCCGGACGAACAATGAGCCGTTCAAGTCTCACATGAAGAGATTCACGACG TACATTGTGGATATGATGAAGAAAGAACAATTCTTCGCTTCGCAGGGTGGGCACATCATC CTAGCTCAGGTTGAAAATGAATACGGAGATATGGAACAAGCGTACGGAGCTGGTGCCAAG CCATATGCAATGTGGGCAGCTAGTATGGCTCTGGCTCAGAATACTGGTGTCCCTTGGATC ATGTGCCAGCAGTATGATGCGCCTGATCCAGTGATAAACACTTGCAATTCATTCTACTGT GATCAATTCAAGCCAAATTCACCAACCAAGCCAAAATTTTGGACTGAGAATTGGCCAGGA TGGTTCCAGACCTTTGGCGAAAGTAATCCCCACAGGCCCCCTGAAGATGTTGCATTTTCT GTTGCACGTTTTTTTGGGAAAGGTGGCAGCCTTCAGAATTACTATGTGTACCATGGTGGA ACAAATTTCGGTCGCACTACTGGAGGGCCATTCATTACTACTAGCTATGACTATGATGCA CCGATCGATGAATATGGCCTTAGGAGACTTCCGAAATGGGCTCATCTAAGGGACCTTCAC AAATCTATCAAATTGGGCGAGCATACCCTGTTGTATGGTAATTCGTCATTTGTTTCTCTG GGGCCTCAACAAGAGGCTGATGTTTACACTGATCAATCAGGAGGATGTGTTGCATTCCTT TCTAATGTTGATTCAGAAAAGGACAAAGTTGTTACTTTCCAGAGCCGGTCGTATGATCTT CCTGCTTGGTCGGTCAGTATCCTGCCTGACTGCAAGAATGTGGCGTTCAACACTGCAAAG GTGCGATCTCAAACTCTGATGATGGATATGGTCCCTGCAAATTTGGAATCATCAAAAGTT GATGGGTGGAGCATTTTCAGAGAGAAATATGGGATTTGGGGTAATATCGACTTAGTCCGA AATGGATTTGTAGACCATATTAATACAACAAAAGACTCTACTGACTACCTATGGTACACA ACAAGTTTTGACGTAGATGGAAGTCATCTGGCAGGTGGCAACCATGTTCTTCATATTGAA TCCAAAGGCCATGCTGTTCAGGCTTTCCTGAACAATGAGCTTATAGGTAGTGCATATGGT AATGGCTCAAAATCAAATTTCAGCGTGGAAATGCCCGTCAATTTGAGGGCTGGGAAGAAC AAACTTTCCCTATTGAGTATGACTGTTGGTTTGCAAAATGGAGGACCCATGTACGAATGG GCAGGAGCCGGCATTACAAGTGTGAAGATCTCAGGAATGGAAAACAGAATAATTGACTTG TCTTCCAATAAATGGGAATACAAGATTGGATTGGAAGGGGAATATTATAGTTTGTTCAAG GCTGATAAGGGGAAGGACATAAGGTGGATGCCACAGTCTGAGCCACCAAAAAATCAACCA ATGACATGGTACAAGGTAAACGTTGATGTTCCCCAAGGAGATGATCCAGTTGGATTAGAT ATGCAGTCTATGGGGAAAGGCCTGGCTTGGTTGAATGGAAATGCCATTGGGAGGTATTGG CCCAGGATAAGTCCTGTCAGTGACAGGTGTACTTCCAGTTGTGACTATAGAGGAACGTTT TCTCCAAATAAGTGCAGGAGAGGATGTGGGCAGCCAACTCAAAGATGGTACCATGTCCCA CGGTCATGGTTTCATCCATCAGGAAACACCCTTGTGATTTTTGAGGAGAAGGGAGGGGAT CCTACAAAGATCACATTCTCAAGAAGAACTGTGGCAAGTGTGTGCTCCTTCGTGTCAGAG CACTACCCTTCCATTGACTTGGAATCCTGGGATAGGAATACCCAAAATGATGGTAGAGAC GCAGCAAAAGTACAGTTGTCTTGCCCCAAGGGTAAAAGTATCTCTTCTGTTAAGTTTGTG AGTTTTGGAAACCCCAGTGGAACCTGCAGATCTTACCAACAAGGAAGCTGCCACCATCCG AACTCAATATCTGTTGTTGAGAAGGCCTGTCTGAACATGAATGGCTGTACCGTCTCCTTG TCAGACGAGGGATTTGGAGAAGATTTATGCCCTGGGGTCACCAAAACACTTGCGATTGAG GCAGACTGCTCTTAA

Peptide Sequence

PEP ID	Os01t0875500-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:37994738:38001584:1 gene:Os01g0875500 transcript:Os01t0875500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GALACTOSIDASE 4 description:Similar to Beta-galactosidase (EC 3.2.1.23). (Os01t0875500-01);Similar to cDNA clone:J033105C09, full insert sequence. (Os01t0875500-02)
Sequence	AHTPYRPPPSTAAMAGASSYFSLRRLLLLLLPLVPLLGATTAAAAGANSSVTYDHRSLII SGRRRLLISTSIHYPRSVPEMWPKLVAEAKDGGADCVETYVFWNGHEPAQGQYYFEERFD LVRFAKIVKDAGLYMILRIGPFVAAEWTFGGVPVWLHYAPGTVFRTNNEPFKSHMKRFTT YIVDMMKKEQFFASQGGHIILAQVENEYGDMEQAYGAGAKPYAMWAASMALAQNTGVPWI MCQQYDAPDPVINTCNSFYCDQFKPNSPTKPKFWTENWPGWFQTFGESNPHRPPEDVAFS VARFFGKGGSLQNYYVYHGGTNFGRTTGGPFITTSYDYDAPIDEYGLRRLPKWAHLRDLH KSIKLGEHTLLYGNSSFVSLGPQQEADVYTDQSGGCVAFLSNVDSEKDKVVTFQSRSYDL PAWSVSILPDCKNVAFNTAKVRSQTLMMDMVPANLESSKVDGWSIFREKYGIWGNIDLVR NGFVDHINTTKDSTDYLWYTTSFDVDGSHLAGGNHVLHIESKGHAVQAFLNNELIGSAYG NGSKSNFSVEMPVNLRAGKNKLSLLSMTVGLQNGGPMYEWAGAGITSVKISGMENRIIDL SSNKWEYKIGLEGEYYSLFKADKGKDIRWMPQSEPPKNQPMTWYKVNVDVPQGDDPVGLD MQSMGKGLAWLNGNAIGRYWPRISPVSDRCTSSCDYRGTFSPNKCRRGCGQPTQRWYHVP RSWFHPSGNTLVIFEEKGGDPTKITFSRRTVASVCSFVSEHYPSIDLESWDRNTQNDGRD AAKVQLSCPKGKSISSVKFVSFGNPSGTCRSYQQGSCHHPNSISVVEKACLNMNGCTVSL SDEGFGEDLCPGVTKTLAIEADCS

Transcript Sequence

Transcript ID	Os01t0875500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:37994738:38001584:1 gene:Os01g0875500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GALACTOSIDASE 4 description:Similar to Beta-galactosidase (EC 3.2.1.23). (Os01t0875500-01);Similar to cDNA clone:J033105C09, full insert sequence. (Os01t0875500-02)
Sequence	TGCTCATACGCCGTATCGACCACCACCCTCGACGGCGGCCATGGCGGGCGCCTCCTCCTA CTTCTCGTTGCGGAGGCTACTCCTCCTGCTGCTGCCGCTGGTACCGTTGCTCGGCGCCAC CACCGCCGCCGCAGCGGGCGCCAACTCGAGCGTCACGTATGACCACCGCTCCCTCATCAT CTCCGGCCGCCGCCGCCTCCTCATCTCCACCTCCATCCACTACCCCCGCAGCGTCCCCGA GATGTGGCCGAAGCTGGTGGCCGAGGCCAAGGACGGCGGCGCCGACTGCGTCGAGACCTA CGTGTTCTGGAACGGCCACGAGCCCGCCCAGGGCCAGTACTACTTCGAGGAGCGGTTCGA TTTGGTGCGATTCGCGAAGATCGTCAAGGACGCCGGGCTGTACATGATCCTGCGCATTGG GCCGTTCGTCGCCGCAGAATGGACCTTCGGGGGCGTGCCGGTGTGGCTGCATTACGCGCC CGGGACGGTGTTCCGGACGAACAATGAGCCGTTCAAGTCTCACATGAAGAGATTCACGAC GTACATTGTGGATATGATGAAGAAAGAACAATTCTTCGCTTCGCAGGGTGGGCACATCAT CCTAGCTCAGGTTGAAAATGAATACGGAGATATGGAACAAGCGTACGGAGCTGGTGCCAA GCCATATGCAATGTGGGCAGCTAGTATGGCTCTGGCTCAGAATACTGGTGTCCCTTGGAT CATGTGCCAGCAGTATGATGCGCCTGATCCAGTGATAAACACTTGCAATTCATTCTACTG TGATCAATTCAAGCCAAATTCACCAACCAAGCCAAAATTTTGGACTGAGAATTGGCCAGG ATGGTTCCAGACCTTTGGCGAAAGTAATCCCCACAGGCCCCCTGAAGATGTTGCATTTTC TGTTGCACGTTTTTTTGGGAAAGGTGGCAGCCTTCAGAATTACTATGTGTACCATGGTGG AACAAATTTCGGTCGCACTACTGGAGGGCCATTCATTACTACTAGCTATGACTATGATGC ACCGATCGATGAATATGGCCTTAGGAGACTTCCGAAATGGGCTCATCTAAGGGACCTTCA CAAATCTATCAAATTGGGCGAGCATACCCTGTTGTATGGTAATTCGTCATTTGTTTCTCT GGGGCCTCAACAAGAGGCTGATGTTTACACTGATCAATCAGGAGGATGTGTTGCATTCCT TTCTAATGTTGATTCAGAAAAGGACAAAGTTGTTACTTTCCAGAGCCGGTCGTATGATCT TCCTGCTTGGTCGGTCAGTATCCTGCCTGACTGCAAGAATGTGGCGTTCAACACTGCAAA GGTGCGATCTCAAACTCTGATGATGGATATGGTCCCTGCAAATTTGGAATCATCAAAAGT TGATGGGTGGAGCATTTTCAGAGAGAAATATGGGATTTGGGGTAATATCGACTTAGTCCG AAATGGATTTGTAGACCATATTAATACAACAAAAGACTCTACTGACTACCTATGGTACAC AACAAGTTTTGACGTAGATGGAAGTCATCTGGCAGGTGGCAACCATGTTCTTCATATTGA ATCCAAAGGCCATGCTGTTCAGGCTTTCCTGAACAATGAGCTTATAGGTAGTGCATATGG TAATGGCTCAAAATCAAATTTCAGCGTGGAAATGCCCGTCAATTTGAGGGCTGGGAAGAA CAAACTTTCCCTATTGAGTATGACTGTTGGTTTGCAAAATGGAGGACCCATGTACGAATG GGCAGGAGCCGGCATTACAAGTGTGAAGATCTCAGGAATGGAAAACAGAATAATTGACTT GTCTTCCAATAAATGGGAATACAAGATTGGATTGGAAGGGGAATATTATAGTTTGTTCAA GGCTGATAAGGGGAAGGACATAAGGTGGATGCCACAGTCTGAGCCACCAAAAAATCAACC AATGACATGGTACAAGGTAAACGTTGATGTTCCCCAAGGAGATGATCCAGTTGGATTAGA TATGCAGTCTATGGGGAAAGGCCTGGCTTGGTTGAATGGAAATGCCATTGGGAGGTATTG GCCCAGGATAAGTCCTGTCAGTGACAGGTGTACTTCCAGTTGTGACTATAGAGGAACGTT TTCTCCAAATAAGTGCAGGAGAGGATGTGGGCAGCCAACTCAAAGATGGTACCATGTCCC ACGGTCATGGTTTCATCCATCAGGAAACACCCTTGTGATTTTTGAGGAGAAGGGAGGGGA TCCTACAAAGATCACATTCTCAAGAAGAACTGTGGCAAGTGTGTGCTCCTTCGTGTCAGA GCACTACCCTTCCATTGACTTGGAATCCTGGGATAGGAATACCCAAAATGATGGTAGAGA CGCAGCAAAAGTACAGTTGTCTTGCCCCAAGGGTAAAAGTATCTCTTCTGTTAAGTTTGT GAGTTTTGGAAACCCCAGTGGAACCTGCAGATCTTACCAACAAGGAAGCTGCCACCATCC GAACTCAATATCTGTTGTTGAGAAGGCCTGTCTGAACATGAATGGCTGTACCGTCTCCTT GTCAGACGAGGGATTTGGAGAAGATTTATGCCCTGGGGTCACCAAAACACTTGCGATTGA GGCAGACTGCTCTTAAGGAGTTTAACTCAGCAATGAGATCCATCGCTACAGATTCGCTCA TCAACTTGAAGCTTATAGTGCTTGGTACCCTTGACGGGTCGCCATTGTGGATGCTAACCA TCCACCCGAGCAAAGGAATTAATTGCACTGCATTCCCAGGTTTGCAATGGACTACTGTAT GATTCAGAAACATGAAGGCATGAACGAGCTTCTATGAGCCCAAAAGGAATGGGATATAAT ATAATATGATATATTGCGATGCCCATGAAACATTTCATAATTGTCATTTTCTTCGTGTTT AGACTTGCTGATATGTAGACACCAGATCGCACTGGAGAAAGTTCTTGGATTGCTCTCTTC ATGTTGTGTCGCGTCATGATATTTCTGGATTAACCTGTGAATGAATCTATGGTTGAGGCA GCAGGTGGTCAACACAGTAGTTCATCTCTCGTTATGATTGGGGAGACAAAAATAAGTTGC TCACTGTGCGGGTACTGTGATGTTGCTAAGATCACAGTGCGGAAGAAACCACTAGCTTGT GGCTCCATTGGCCGTAGATTCTGGATAAGATTAAGTAAGATCTGCATTCCATTCCATGGC GTACGGAATGGATGTTATTAAATCTTTGATTAGCCATGGATTAAGGAGCCGGGGCCTTTG ACTGGATGCCGCTTCATGTTTTCCTTGTCATGTGAGTATTATTTAGGGGCCCTCGAATTA AGTCCTAATCACCCACAGCCTGTTCCCTTCCTCTTCTCCCTTCTTCCGTAGTGGTTTCAT GACTCCATTGATAGGCCATGGTACTTGTACAGTATCAGGGAATAAATAAATATTGGAGGA ATCATCTCCATCGAAAAGG