Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0875300-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:37982651:37985429:1 gene:Os01g0875300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Universal stress protein family protein. (Os01t0875300-00)
Sequence

GTAATCAGTGGAGGAGTATTCACTAATCAGCTAGCACGGGTGCAACACGCTCTCGTGACC
ACCCCCCCATCCCCTCTCCTTGGCTCCCACTCTTTAAGCGGCCCTTGTCCTTTCAGCTCC
TCGGTCCCTCCCCCTCCATCTCACTCCCTTATATCGCTCGCTCACTCGCTAGCTCGCACC
GCGCCGGCCGGGAGCACGCACGCACGCATTGCCATCGCCGTGCGCGGAGGAGGAGAGGAG
ATCGAGGTCTCGAGGTCGTTGGTTGGTTGGTTGCATGGCGAGCGGTGGCGGGGAGCACTT
CTTGCGGCAGCTGAGCGCGAGCAACGGGGGATACGGTGGTGCGGCGCAGTATCAGATGGG
GCGAGGGGTGGTGGCGGAGGAGGAGGTGGAGCTCGGCGGAGGAGGCAGGAGGAGGGGCTC
GAAGCGGGGGACGCGGCCGCGGCCGCGGCGGCGGCGGCGGCGGTGGCCGGGAGGAAGCGG
GTGATGGTGGTGGTGGACGACACCTCCGGGGCCAAGCACGCCATGATGTGGGCGCTCACC
CACGTCGCCAACAAGGGGGACTTCCTCACGCTGCTCCACGTCCTCCCGTACGCCGGCGCC
GGCAGAGGCGAGGAGACCCCCTCCCTCGCCAACTCCCTCGGCACGCTCTGCAAGGCCTGC
AGGCCAGAGGTGGAGGTTGAAGCACTTGTGATCCAAGGACCAAAGCTGGCCACTGTCCTC
AGCCAAGTGAAGAAATTGGAGGCGTCTGTGCTTGTGCTCAGCCAATCCAAGCCATCCCAT
TTCTGTTGGTTGAGTTGCATCCTGCGGAGCAGCAGCGAGGAGTTCGTCGAGCAATGCATC
AACCAGGCTGAGTGCCTGACGTTGGCAGTGAGGAAGCAGAGCAAGGGCGTCGGCGGGTAC
CTCATCAGCACACGGTGGCAGAAGAACTTCTGGCTCCTGGCTTGA

Peptide Sequence

PEP ID

Os01t0875300-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:37982651:37985429:1 gene:Os01g0875300 transcript:Os01t0875300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Universal stress protein family protein. (Os01t0875300-00)
Sequence

VISGGVFTNQLARVQHALVTTPPSPLLGSHSLSGPCPFSSSVPPPPSHSLISLAHSLART
APAGSTHARIAIAVRGGGEEIEVSRSLVGWLHGERWRGALLAAAEREQRGIRWCGAVSDG
ARGGGGGGGGARRRRQEEGLEAGDAAAAAAAAAAVAGRKRVMVVVDDTSGAKHAMMWALT
HVANKGDFLTLLHVLPYAGAGRGEETPSLANSLGTLCKACRPEVEVEALVIQGPKLATVL
SQVKKLEASVLVLSQSKPSHFCWLSCILRSSSEEFVEQCINQAECLTLAVRKQSKGVGGY
LISTRWQKNFWLLA

Transcript Sequence

Transcript ID

Os01t0875300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:37982651:37985429:1 gene:Os01g0875300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Universal stress protein family protein. (Os01t0875300-00)
Sequence

GTAATCAGTGGAGGAGTATTCACTAATCAGCTAGCACGGGTGCAACACGCTCTCGTGACC
ACCCCCCCATCCCCTCTCCTTGGCTCCCACTCTTTAAGCGGCCCTTGTCCTTTCAGCTCC
TCGGTCCCTCCCCCTCCATCTCACTCCCTTATATCGCTCGCTCACTCGCTAGCTCGCACC
GCGCCGGCCGGGAGCACGCACGCACGCATTGCCATCGCCGTGCGCGGAGGAGGAGAGGAG
ATCGAGGTCTCGAGGTCGTTGGTTGGTTGGTTGCATGGCGAGCGGTGGCGGGGAGCACTT
CTTGCGGCAGCTGAGCGCGAGCAACGGGGGATACGGTGGTGCGGCGCAGTATCAGATGGG
GCGAGGGGTGGTGGCGGAGGAGGAGGTGGAGCTCGGCGGAGGAGGCAGGAGGAGGGGCTC
GAAGCGGGGGACGCGGCCGCGGCCGCGGCGGCGGCGGCGGCGGTGGCCGGGAGGAAGCGG
GTGATGGTGGTGGTGGACGACACCTCCGGGGCCAAGCACGCCATGATGTGGGCGCTCACC
CACGTCGCCAACAAGGGGGACTTCCTCACGCTGCTCCACGTCCTCCCGTACGCCGGCGCC
GGCAGAGGCGAGGAGACCCCCTCCCTCGCCAACTCCCTCGGCACGCTCTGCAAGGCCTGC
AGGCCAGAGGTGGAGGTTGAAGCACTTGTGATCCAAGGACCAAAGCTGGCCACTGTCCTC
AGCCAAGTGAAGAAATTGGAGGCGTCTGTGCTTGTGCTCAGCCAATCCAAGCCATCCCAT
TTCTGTTGGTTGAGTTGCATCCTGCGGAGCAGCAGCGAGGAGTTCGTCGAGCAATGCATC
AACCAGGCTGAGTGCCTGACGTTGGCAGTGAGGAAGCAGAGCAAGGGCGTCGGCGGGTAC
CTCATCAGCACACGGTGGCAGAAGAACTTCTGGCTCCTGGCTTGA