Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0875000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:37968972:37970334:-1 gene:Os01g0875000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0875000-01)
Sequence

ATGAACGCCTTCTTCACGTCGCTGGCGAGAGGGCTGGACGACCTGAGCAGCGGCGGCGGG
CTGTCGTCGCTGCCGGCGCTGCTGCGGGCGGCGGCGCTGCTCAGGGGGCTGCACTCGCAG
CTCACGCTGCTGGTGGGGCAGCTCCACCTGCCGCCCGGTGGGCGGTGGCTCGACGAGTAC
ATGGACGAGACCGCGCGGCTCTGGGAGGCTTGCCTCGCCGTCAAGGTCGGCCTTGCCGCC
GTCGAGCGGTATTGCGCTGCCGCGTCTTGTGCTGCGGCCGCCATGGATGACTGGCTCCAG
GACCCTTCCCCTCTCTCCACTCGCCAGGTGATGAGGGCGATCTCTGCGTCGAGGAGGGAG
GCCATGGCGGCGGAGGAGGAGAACCGTGCGCTGTCGGAGGCGAGGATCGCGCCGCTGTCG
CTGCAGCTCGACGAGCGGCTGCTGCTGCGCGCCGCGGACGCCAGGTTGAGCGGCTTCAAC
GGCTTCCGCGGCCTGCTCTACGCGCTGCACAACGCCAGCTCGCTGCTGCTCCTCGTCCTC
GCCTCCGGCGCCGTCTCCTGCGCCGCCGCCGCAGCGGGGCCGTGCTCCGCGGATGGCGCC
GCGGACGCCGGCGGGTTCGTGGCGTCCATCGCAATGCTGCAGCAGAGGATGGCGGAGGAG
GCCGACGCCGACGGTAGCGCCGGCGCGGCGCGGGGGGGCATCCGGATGTACGAGTTCCGG
TGCGCGCGCGCCGCCGTGGAGGCGGCGCACGAGGAGGTGGAGCGCGCCGTGGCGGCGGGC
CCCCGCAAGCAGCAGTGCGAGGACGGCGACGGCGGCGTCAAGGACAAGGTCGACGAGCTC
AAGGCGTGGCTCGACGTGCTCCGGACCGGCACCGACGGCCTCGTCTGCCAGCTCGACGAC
TTCCTCGACGACATTGTCGAGGGCAGGAAGGAGCTCTCCGACCTTTGCAGCCACTGA

Peptide Sequence

PEP ID

Os01t0875000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:37968972:37970334:-1 gene:Os01g0875000 transcript:Os01t0875000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0875000-01)
Sequence

MNAFFTSLARGLDDLSSGGGLSSLPALLRAAALLRGLHSQLTLLVGQLHLPPGGRWLDEY
MDETARLWEACLAVKVGLAAVERYCAAASCAAAAMDDWLQDPSPLSTRQVMRAISASRRE
AMAAEEENRALSEARIAPLSLQLDERLLLRAADARLSGFNGFRGLLYALHNASSLLLLVL
ASGAVSCAAAAAGPCSADGAADAGGFVASIAMLQQRMAEEADADGSAGAARGGIRMYEFR
CARAAVEAAHEEVERAVAAGPRKQQCEDGDGGVKDKVDELKAWLDVLRTGTDGLVCQLDD
FLDDIVEGRKELSDLCSH

Transcript Sequence

Transcript ID

Os01t0875000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:37968972:37970334:-1 gene:Os01g0875000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0875000-01)
Sequence

AGACGCATCGATCGACCGGTGTTCGATCTTTCTTGCTGTGGGGATTTCGCCATGAACGCC
TTCTTCACGTCGCTGGCGAGAGGGCTGGACGACCTGAGCAGCGGCGGCGGGCTGTCGTCG
CTGCCGGCGCTGCTGCGGGCGGCGGCGCTGCTCAGGGGGCTGCACTCGCAGCTCACGCTG
CTGGTGGGGCAGCTCCACCTGCCGCCCGGTGGGCGGTGGCTCGACGAGTACATGGACGAG
ACCGCGCGGCTCTGGGAGGCTTGCCTCGCCGTCAAGGTCGGCCTTGCCGCCGTCGAGCGG
TATTGCGCTGCCGCGTCTTGTGCTGCGGCCGCCATGGATGACTGGCTCCAGGACCCTTCC
CCTCTCTCCACTCGCCAGGTGATGAGGGCGATCTCTGCGTCGAGGAGGGAGGCCATGGCG
GCGGAGGAGGAGAACCGTGCGCTGTCGGAGGCGAGGATCGCGCCGCTGTCGCTGCAGCTC
GACGAGCGGCTGCTGCTGCGCGCCGCGGACGCCAGGTTGAGCGGCTTCAACGGCTTCCGC
GGCCTGCTCTACGCGCTGCACAACGCCAGCTCGCTGCTGCTCCTCGTCCTCGCCTCCGGC
GCCGTCTCCTGCGCCGCCGCCGCAGCGGGGCCGTGCTCCGCGGATGGCGCCGCGGACGCC
GGCGGGTTCGTGGCGTCCATCGCAATGCTGCAGCAGAGGATGGCGGAGGAGGCCGACGCC
GACGGTAGCGCCGGCGCGGCGCGGGGGGGCATCCGGATGTACGAGTTCCGGTGCGCGCGC
GCCGCCGTGGAGGCGGCGCACGAGGAGGTGGAGCGCGCCGTGGCGGCGGGCCCCCGCAAG
CAGCAGTGCGAGGACGGCGACGGCGGCGTCAAGGACAAGGTCGACGAGCTCAAGGCGTGG
CTCGACGTGCTCCGGACCGGCACCGACGGCCTCGTCTGCCAGCTCGACGACTTCCTCGAC
GACATTGTCGAGGGCAGGAAGGAGCTCTCCGACCTTTGCAGCCACTGATCGATCGACTGC
AACACCATCATCATCGCCATGGATGATGGCATGAAATGCTTCATGCTTCGCGTGGTAGAG
TACTCGTACTGTACGTAGTAGTAGCAAGCATAATCTTCAGTAGCGAGTACGAGTAGTAGT
TAGTGGTACTCGATGAGACAGAGTGTGTCGCTGTCACAGCATTTTGCTCATGATGTTGTT
GTTGCTGC