Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0874700-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:37948919:37951936:1 gene:Os01g0874700 gene_biotype:protein_coding transcript_biotype:protein_coding description:GOLD domain containing protein. (Os01t0874700-01);GOLD domain containing protein. (Os01t0874700-02);Similar to patellin-1. (Os01t0874700-03)
Sequence	ATGGCGGAGGAGCCACAGCCAGAGGCCGCGCCCGCCGCGGTGGCGGCGACGACCGAGGTG GCGGTGGCGGAGAAGGCGCCCGTGGAGGCGGAGAAGGAGAAGAAGGTGGAGGAGGAGACG CCGGCGGTGGAGGCCGAGGCGAAGGAGGAGAAGAAGGATGAGGCGGCGGCGGCGGCGGCG GCGGGAGGTGATGAGGCCGGGGCGATAGAGGGGACCGGATCGTTCAAGGAGGAGAGCAAC CTGGTGGCGGACTTGCCTGACCCGGAGAAGAAGGCGCTCGATGAGTTCAAGCAGCTGATC GCCGCCGCCCTCGCCGCCTGTGAGTTCAATCTGCCTCCCCCTCCGCCGCCTCCCAAGGCG AAGGTTGAAGCCGCCGTTGAGGAGACCAAGGCGGAGGAGACCAAGGCCGAGGAGGAACCC AAGGCTGAGGAGCCGGCCAAGGAGGAGGAGCCCAAGGCCGAGGTGGCGGCGGCGGCGGCG GCGCCGCCGGAGGCAGGAACCGAGGAGCCGAAGGCGGAGGCGTCGTCCGAAGAGGCCAAG ACCGAGGAGCCGAAGGCCGAGGCGGCGGCCGACGAGCCGGCCAAGGAGGAGTCCAAAGCT GAGGCGGCGCCGGCTGAGGAAGCCAAGCCGGCCGAGCCGGAGCCGGAGGAGAAGACCGTC GTGGTCACCGAGGAAGAGGCGGCCACCAAGACGGTGGAAGCGATCGAGGAAACCGTCGTG CCCGCTGCTGCTGCGCCTGCTGCCGCCGCCACGGAGGAAGCCGCGGCGCCGGAACCGGAG GTGCAGGCGGCGGCGGCGCCTGAGCCCGTGTTGATCTGGGGCGTGCCCCTGGTAGGCGAC GACGAGCGCACCGACACGGTGCTCCTCAAGTTCCTGCGCGCGCGCGAGTTCAAGGTGAAG GAGGCCATGGCGATGCTCAGGTCGGCCGTGCTGTGGCGCAAGCGCTTCGGCATCGAGTCC CTCCTCGACGCCGACCTCGCCCTGCCGGAGCTCGACAGCGTGGTGTTCTACCGCGGCGCC GACCGCGAGGGCCACCCCGTGTGCTACAACGTCTACGGCGAATTCCAGGACAAGGACCTG TACGAGAAGGCATTCGGCGACGAGGAGAAGCGGGAGCGCTTCCTCAAGTGGCGCATCCAG CTGCTGGAGCGCGGCATCCTGTCGCAGCTCGACTTCTCGCCCAGTGGCATCTGCTCCATG GTTCAGGTCACAGACCTCAAGAACTCGCCACCTATGCTCGGCAAGCACCGCGCCGTCACC CGCCAGGCCGTTGCTCTGCTCCAGGACAACTACCCCGAGTTCATCGCCAAGAAGGTGTTC ATCAATGTGCCATGGTGGTATCTCGCTGCCAACAAAATGATGAGCCCGTTCCTCACGCAG CGTACCAAGAGCAAGTTCATTTTTGCCAGCCCAGCCAAATCAGCTGAGACCCTCTTCAGA TATATCGCACCAGAGCAAGTCCCTGTCCAATTCGGAGGTCTCTTCAAGGAAGATGATCCT GAGTTCACCACCTCAGACGCCGTTACCGAGCTCACTATCAAACCTTCATCGAAAGAAACC GTTGAGATTCCTGTCACTGAGAATTCCACGATTGGATGGGAGCTCCGGGTGCTTGGATGG GAGGTGAGCTACGGAGCAGAGTTCACTCCTGATGCCGAGGGTGGATACACAGTCATCGTG CAGAAAACGAGGAAGGTGCCTGCAAATGAGGAACCAATCATGAAAGGCAGCTTCAAGGTT GGCGAGCCAGGAAAGATTGTGCTAACGATCAACAACCCTGCATCAAAGAAGAAGAAGCTC CTCTACAGATCCAAGGTCAAGAGCACCAGTGAGTCCGTTTGA

Peptide Sequence

PEP ID	Os01t0874700-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:37948919:37951936:1 gene:Os01g0874700 transcript:Os01t0874700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:GOLD domain containing protein. (Os01t0874700-01);GOLD domain containing protein. (Os01t0874700-02);Similar to patellin-1. (Os01t0874700-03)
Sequence	MAEEPQPEAAPAAVAATTEVAVAEKAPVEAEKEKKVEEETPAVEAEAKEEKKDEAAAAAA AGGDEAGAIEGTGSFKEESNLVADLPDPEKKALDEFKQLIAAALAACEFNLPPPPPPPKA KVEAAVEETKAEETKAEEEPKAEEPAKEEEPKAEVAAAAAAPPEAGTEEPKAEASSEEAK TEEPKAEAAADEPAKEESKAEAAPAEEAKPAEPEPEEKTVVVTEEEAATKTVEAIEETVV PAAAAPAAAATEEAAAPEPEVQAAAAPEPVLIWGVPLVGDDERTDTVLLKFLRAREFKVK EAMAMLRSAVLWRKRFGIESLLDADLALPELDSVVFYRGADREGHPVCYNVYGEFQDKDL YEKAFGDEEKRERFLKWRIQLLERGILSQLDFSPSGICSMVQVTDLKNSPPMLGKHRAVT RQAVALLQDNYPEFIAKKVFINVPWWYLAANKMMSPFLTQRTKSKFIFASPAKSAETLFR YIAPEQVPVQFGGLFKEDDPEFTTSDAVTELTIKPSSKETVEIPVTENSTIGWELRVLGW EVSYGAEFTPDAEGGYTVIVQKTRKVPANEEPIMKGSFKVGEPGKIVLTINNPASKKKKL LYRSKVKSTSESV

Transcript Sequence

Transcript ID	Os01t0874700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:37948919:37951936:1 gene:Os01g0874700 gene_biotype:protein_coding transcript_biotype:protein_coding description:GOLD domain containing protein. (Os01t0874700-01);GOLD domain containing protein. (Os01t0874700-02);Similar to patellin-1. (Os01t0874700-03)
Sequence	AAGTCCGCAACGCGAGAAACGCAGGCAGCAAAGCAAGCGAACCCAAAGCTGGCCTCGCAC TCACACTGACAGCCTTGCTCTCCTCCTCCCCCTATATCTCTCCTCCCTCCCTCGCCGCCT CCTCCCCAATCCTCCAAACCCTAATCCCCCACCTCACTCTCTCTCGATCTCGTGCTCTCC TCCTTTCGCGAGCGCGTTCTTTGGAGGGGAGATGGCGGAGGAGCCACAGCCAGAGGCCGC GCCCGCCGCGGTGGCGGCGACGACCGAGGTGGCGGTGGCGGAGAAGGCGCCCGTGGAGGC GGAGAAGGAGAAGAAGGTGGAGGAGGAGACGCCGGCGGTGGAGGCCGAGGCGAAGGAGGA GAAGAAGGATGAGGCGGCGGCGGCGGCGGCGGCGGGAGGTGATGAGGCCGGGGCGATAGA GGGGACCGGATCGTTCAAGGAGGAGAGCAACCTGGTGGCGGACTTGCCTGACCCGGAGAA GAAGGCGCTCGATGAGTTCAAGCAGCTGATCGCCGCCGCCCTCGCCGCCTGTGAGTTCAA TCTGCCTCCCCCTCCGCCGCCTCCCAAGGCGAAGGTTGAAGCCGCCGTTGAGGAGACCAA GGCGGAGGAGACCAAGGCCGAGGAGGAACCCAAGGCTGAGGAGCCGGCCAAGGAGGAGGA GCCCAAGGCCGAGGTGGCGGCGGCGGCGGCGGCGCCGCCGGAGGCAGGAACCGAGGAGCC GAAGGCGGAGGCGTCGTCCGAAGAGGCCAAGACCGAGGAGCCGAAGGCCGAGGCGGCGGC CGACGAGCCGGCCAAGGAGGAGTCCAAAGCTGAGGCGGCGCCGGCTGAGGAAGCCAAGCC GGCCGAGCCGGAGCCGGAGGAGAAGACCGTCGTGGTCACCGAGGAAGAGGCGGCCACCAA GACGGTGGAAGCGATCGAGGAAACCGTCGTGCCCGCTGCTGCTGCGCCTGCTGCCGCCGC CACGGAGGAAGCCGCGGCGCCGGAACCGGAGGTGCAGGCGGCGGCGGCGCCTGAGCCCGT GTTGATCTGGGGCGTGCCCCTGGTAGGCGACGACGAGCGCACCGACACGGTGCTCCTCAA GTTCCTGCGCGCGCGCGAGTTCAAGGTGAAGGAGGCCATGGCGATGCTCAGGTCGGCCGT GCTGTGGCGCAAGCGCTTCGGCATCGAGTCCCTCCTCGACGCCGACCTCGCCCTGCCGGA GCTCGACAGCGTGGTGTTCTACCGCGGCGCCGACCGCGAGGGCCACCCCGTGTGCTACAA CGTCTACGGCGAATTCCAGGACAAGGACCTGTACGAGAAGGCATTCGGCGACGAGGAGAA GCGGGAGCGCTTCCTCAAGTGGCGCATCCAGCTGCTGGAGCGCGGCATCCTGTCGCAGCT CGACTTCTCGCCCAGTGGCATCTGCTCCATGGTTCAGGTCACAGACCTCAAGAACTCGCC ACCTATGCTCGGCAAGCACCGCGCCGTCACCCGCCAGGCCGTTGCTCTGCTCCAGGACAA CTACCCCGAGTTCATCGCCAAGAAGGTGTTCATCAATGTGCCATGGTGGTATCTCGCTGC CAACAAAATGATGAGCCCGTTCCTCACGCAGCGTACCAAGAGCAAGTTCATTTTTGCCAG CCCAGCCAAATCAGCTGAGACCCTCTTCAGATATATCGCACCAGAGCAAGTCCCTGTCCA ATTCGGAGGTCTCTTCAAGGAAGATGATCCTGAGTTCACCACCTCAGACGCCGTTACCGA GCTCACTATCAAACCTTCATCGAAAGAAACCGTTGAGATTCCTGTCACTGAGAATTCCAC GATTGGATGGGAGCTCCGGGTGCTTGGATGGGAGGTGAGCTACGGAGCAGAGTTCACTCC TGATGCCGAGGGTGGATACACAGTCATCGTGCAGAAAACGAGGAAGGTGCCTGCAAATGA GGAACCAATCATGAAAGGCAGCTTCAAGGTTGGCGAGCCAGGAAAGATTGTGCTAACGAT CAACAACCCTGCATCAAAGAAGAAGAAGCTCCTCTACAGATCCAAGGTCAAGAGCACCAG TGAGTCCGTTTGAGGTTGCAGCTGCCTGATCACCAGATTCACCACAATGGCAGCTGAACT CATTCCCTGATGGAAGAGAAACCTTTTGGTTTTGGTTCTTTAATTTATTGGTTTTGCTGT TTTGGTTCACATTTTGTATTTGTTTAATTAAAAACCAAAGTGAGCTTGTTTTTGTGATAG TTGGAAGGAGAGGGTTGATATGATATAATGACATCGTGATGGTTTGTTGAGGGCAGAGGA CAAAAATTGTGGAAGGACTGAAGAATATCTGCTGCTTTGTATATCTGTCTGTACATTGCA TCTCTGGATTCTCATGGACATGTTAAATTTAGAAGTACTTGTCATC