Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0870100-03
CDS Infomation	cds chromosome:IRGSP-1.0:1:37715574:37720105:-1 gene:Os01g0870100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLLUX description:Ion channel DMI1.,Cation channel protein. (Os01t0870100-01);Similar to DMI1 protein homologue. (Os01t0870100-02);Similar to Ion channel POLLUX. (Os01t0870100-03)
Sequence	ATGCTGCTGGATGAGAGGAGATCGCTCTCGCCGCCGCCGCCGCAGCAGCGCGCCCCGCGA TTTGATCTCTCCCCGTATCTTGTACTAATGCTGGTTGTAACTGTCATAAGTTTTTCCTTG GCTATATGGCAGTGGATGAAAGCTACCGTACTCCAGGAAAAGATCAGATCATGCTGTAGT GTTAGTACTGTGGACTGTAAGACAACTACTGAGGCGTTCAAGATTAACGGACAGCATGGT TCTGATTTTATCAACTCCGCGGACTGGAATTTAGCTTCCTGCAGCAGAATGCTTGTTTTT GCGATACCTGTATTCTTGGTTAAGTACATTGATCAGCTTCGACGAAGGAACACAGATTCC ATTAGGCTAAGAAGCACCGAGGAAGAAGTGCCTCTGAAGAAGAGGATTGCTTATAAGGTT GATGTGTTCTTCTCAGGACACCCGTACGCAAAGCTTCTTGCGCTCCTGTTAGCCACAATA ATCCTCATTGCTTCTGGCGGGATTGCGCTTTATGTTGTCAGCGGCAGTGGATTCCTGGAG GCTCTTTGGCTTTCATGGACTTTTGTGGCAGATTCAGGAAACCATGCTGATCAGGTTGGC CTGGGCCCAAGGATTGTGTCCGTGTCGATTAGCTCTGGGGGTATGCTGGTGTTTGCCACA ATGCTTGGGCTTGTGTCAGATGCAATATCAGAGAAGGTAGATTCCTGGCGCAAGGGAAAA AGTGAGGTGATAGAGGTCAACCATATACTAATCCTCGGATGGAGCGACAAGTTGGGCTCT CTCCTGAAGCAGCTAGCTATAGCAAACAAGAGTATTGGTGGTGGTGTCGTTGTTGTTCTG GCAGAAAGAGACAAGGAAGAAATGGAGATGGACATTGGGAAGCTAGAGTTTGACTTTATG GGAACATCTGTAATATGTAGAAGTGGCAGTCCTCTAATTCTAGCTGATTTGAAGAAGGTT TCTGTTTCTAAAGCACGTGCTATTATTGTTTTAGCATCCGATGAAAATGCAGACCAAAGT GATGCACGGGCTTTACGTGTGGTCCTGAGCCTGACTGGAGTTAAAGAGGGTTTAAGGGGA CATGTTGTTGTAGAGATGAGTGACCTTGACAACGAGCCTTTGGTGAAACTGGTTGGAGGT GAACTAATTGAAACAGTTGTTGCCCATGATGTGATTGGACGTTTGATGATACAATGTGCA CTCCAACCAGGCCTGGCACAGATATGGGAGGATATTTTGGGGTTTGAAAACGCAGAGTTC TACATTAAAAGATGGCCAGAATTAGATGGCATGCGATTTGGGGATGTCTTAATCTCATTT CCTGACGCTGTTCCATGTGGAGTAAAGATTGCTTCAAAAGCTGGAAAAATCTTAATGAAT CCTGATAATGATTATGTTTTGCAAGAAGGTGATGAGGTCCTTGTTATAGCAGAAGATGAC GATACTTATGTTCCTGCCTCTCTACCACAGGTGCGAAAGGGTTTTCTACCTAATATCCCA ACCCCTCCTAAATACCCAGAGAAAATTTTGTTCTGCGGTTGGCGACGTGACATTCATGAC ATGATAATGGTTCTAGAAGCATTTCTCGCTCCAGGTTCTGAATTATGGATGTTTAACGAG GTGCCAGAGAAGGAGAGGGAGAGAAAACTGACTGACGGTGGTATGGATATTTATGGACTA ACAAACATTAAACTTGTACATAAAGAAGGGAATGCCGTCATCAGGCGGCACTTAGAAAGT TTGCCTCTGGAGACATTCGATTCTATTTTAATTCTTGCAGATGAGTCAGTGGAGGATTCC ATCGTACATTCTGATTCACGTTCTTTAGCTACACTTCTTCTAATTCGCGACATTCAGTCT AAACGTCTTCCATCAAAGGAACTAAAATCACCTCTGCGTTACAATGGCTTCTGTCACAGC TCCTGGATTCGGGAGATGCAGCACGCATCAGATAAATCAATAATTATCAGTGAAATTCTG GATTCCAGAACCAGAAACCTTGTATCTGTCTCCAAAATCAGCGACTATGTTCTATCAAAT GAACTTGTCAGCATGGCATTAGCAATGGTAGCAGAGGACAAACAAATCAACAGAGTTCTT GAAGAACTTTTTGCCGAGGAGGGCAACGAGATGTGCATACGTTCAGCTGAGTTTTACCTC TATGAGCAAGAGGAATTGAGTTTCTTTGATATAATGGTCAGGGCTCGTGAAAGAGACGAG GTTGTCATTGGCTACCGCCTTGCCAACGATGACCAGGCAATCATTAATCCAGAACAGAAG TCTGAGATTAGGAAGTGGTCGCTAGACGATGTTTTTGTTGTGATCTCAAAAGGTGACTAA

Peptide Sequence

PEP ID	Os01t0870100-03
PEP Infomation	pep chromosome:IRGSP-1.0:1:37715574:37720105:-1 gene:Os01g0870100 transcript:Os01t0870100-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLLUX description:Ion channel DMI1.,Cation channel protein. (Os01t0870100-01);Similar to DMI1 protein homologue. (Os01t0870100-02);Similar to Ion channel POLLUX. (Os01t0870100-03)
Sequence	MLLDERRSLSPPPPQQRAPRFDLSPYLVLMLVVTVISFSLAIWQWMKATVLQEKIRSCCS VSTVDCKTTTEAFKINGQHGSDFINSADWNLASCSRMLVFAIPVFLVKYIDQLRRRNTDS IRLRSTEEEVPLKKRIAYKVDVFFSGHPYAKLLALLLATIILIASGGIALYVVSGSGFLE ALWLSWTFVADSGNHADQVGLGPRIVSVSISSGGMLVFATMLGLVSDAISEKVDSWRKGK SEVIEVNHILILGWSDKLGSLLKQLAIANKSIGGGVVVVLAERDKEEMEMDIGKLEFDFM GTSVICRSGSPLILADLKKVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRG HVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEF YIKRWPELDGMRFGDVLISFPDAVPCGVKIASKAGKILMNPDNDYVLQEGDEVLVIAEDD DTYVPASLPQVRKGFLPNIPTPPKYPEKILFCGWRRDIHDMIMVLEAFLAPGSELWMFNE VPEKERERKLTDGGMDIYGLTNIKLVHKEGNAVIRRHLESLPLETFDSILILADESVEDS IVHSDSRSLATLLLIRDIQSKRLPSKELKSPLRYNGFCHSSWIREMQHASDKSIIISEIL DSRTRNLVSVSKISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIRSAEFYL YEQEELSFFDIMVRARERDEVVIGYRLANDDQAIINPEQKSEIRKWSLDDVFVVISKGD

Transcript Sequence

Transcript ID	Os01t0870100-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:37715574:37720105:-1 gene:Os01g0870100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLLUX description:Ion channel DMI1.,Cation channel protein. (Os01t0870100-01);Similar to DMI1 protein homologue. (Os01t0870100-02);Similar to Ion channel POLLUX. (Os01t0870100-03)
Sequence	CCGATGCTGCTGGATGAGAGGAGATCGCTCTCGCCGCCGCCGCCGCAGCAGCGCGCCCCG CGATTTGATCTCTCCCCGTATCTTGTACTAATGCTGGTTGTAACTGTCATAAGTTTTTCC TTGGCTATATGGCAGTGGATGAAAGCTACCGTACTCCAGGAAAAGATCAGATCATGCTGT AGTGTTAGTACTGTGGACTGTAAGACAACTACTGAGGCGTTCAAGATTAACGGACAGCAT GGTTCTGATTTTATCAACTCCGCGGACTGGAATTTAGCTTCCTGCAGCAGAATGCTTGTT TTTGCGATACCTGTATTCTTGGTTAAGTACATTGATCAGCTTCGACGAAGGAACACAGAT TCCATTAGGCTAAGAAGCACCGAGGAAGAAGTGCCTCTGAAGAAGAGGATTGCTTATAAG GTTGATGTGTTCTTCTCAGGACACCCGTACGCAAAGCTTCTTGCGCTCCTGTTAGCCACA ATAATCCTCATTGCTTCTGGCGGGATTGCGCTTTATGTTGTCAGCGGCAGTGGATTCCTG GAGGCTCTTTGGCTTTCATGGACTTTTGTGGCAGATTCAGGAAACCATGCTGATCAGGTT GGCCTGGGCCCAAGGATTGTGTCCGTGTCGATTAGCTCTGGGGGTATGCTGGTGTTTGCC ACAATGCTTGGGCTTGTGTCAGATGCAATATCAGAGAAGGTAGATTCCTGGCGCAAGGGA AAAAGTGAGGTGATAGAGGTCAACCATATACTAATCCTCGGATGGAGCGACAAGTTGGGC TCTCTCCTGAAGCAGCTAGCTATAGCAAACAAGAGTATTGGTGGTGGTGTCGTTGTTGTT CTGGCAGAAAGAGACAAGGAAGAAATGGAGATGGACATTGGGAAGCTAGAGTTTGACTTT ATGGGAACATCTGTAATATGTAGAAGTGGCAGTCCTCTAATTCTAGCTGATTTGAAGAAG GTTTCTGTTTCTAAAGCACGTGCTATTATTGTTTTAGCATCCGATGAAAATGCAGACCAA AGTGATGCACGGGCTTTACGTGTGGTCCTGAGCCTGACTGGAGTTAAAGAGGGTTTAAGG GGACATGTTGTTGTAGAGATGAGTGACCTTGACAACGAGCCTTTGGTGAAACTGGTTGGA GGTGAACTAATTGAAACAGTTGTTGCCCATGATGTGATTGGACGTTTGATGATACAATGT GCACTCCAACCAGGCCTGGCACAGATATGGGAGGATATTTTGGGGTTTGAAAACGCAGAG TTCTACATTAAAAGATGGCCAGAATTAGATGGCATGCGATTTGGGGATGTCTTAATCTCA TTTCCTGACGCTGTTCCATGTGGAGTAAAGATTGCTTCAAAAGCTGGAAAAATCTTAATG AATCCTGATAATGATTATGTTTTGCAAGAAGGTGATGAGGTCCTTGTTATAGCAGAAGAT GACGATACTTATGTTCCTGCCTCTCTACCACAGGTGCGAAAGGGTTTTCTACCTAATATC CCAACCCCTCCTAAATACCCAGAGAAAATTTTGTTCTGCGGTTGGCGACGTGACATTCAT GACATGATAATGGTTCTAGAAGCATTTCTCGCTCCAGGTTCTGAATTATGGATGTTTAAC GAGGTGCCAGAGAAGGAGAGGGAGAGAAAACTGACTGACGGTGGTATGGATATTTATGGA CTAACAAACATTAAACTTGTACATAAAGAAGGGAATGCCGTCATCAGGCGGCACTTAGAA AGTTTGCCTCTGGAGACATTCGATTCTATTTTAATTCTTGCAGATGAGTCAGTGGAGGAT TCCATCGTACATTCTGATTCACGTTCTTTAGCTACACTTCTTCTAATTCGCGACATTCAG TCTAAACGTCTTCCATCAAAGGAACTAAAATCACCTCTGCGTTACAATGGCTTCTGTCAC AGCTCCTGGATTCGGGAGATGCAGCACGCATCAGATAAATCAATAATTATCAGTGAAATT CTGGATTCCAGAACCAGAAACCTTGTATCTGTCTCCAAAATCAGCGACTATGTTCTATCA AATGAACTTGTCAGCATGGCATTAGCAATGGTAGCAGAGGACAAACAAATCAACAGAGTT CTTGAAGAACTTTTTGCCGAGGAGGGCAACGAGATGTGCATACGTTCAGCTGAGTTTTAC CTCTATGAGCAAGAGGAATTGAGTTTCTTTGATATAATGGTCAGGGCTCGTGAAAGAGAC GAGGTTGTCATTGGCTACCGCCTTGCCAACGATGACCAGGCAATCATTAATCCAGAACAG AAGTCTGAGATTAGGAAGTGGTCGCTAGACGATGTTTTTGTTGTGATCTCAAAAGGTGAC TAATTTTACAATAGCACCTCACTTTTTTCGAGTTAGTAAGTATATATTCTAACACTAGTG CTGCTAACCAATGCTAACTGAAATGCTTTAAGTTGCTAACCAGGCAAACACACGTCACAG TACAGTTCTGATCTCATATGTTGCTAGCTCTGTACATGTTGATTTGCCATCTCCATAGCA TTTAGTTGATCTTAACATAAATAATTACACATCAGCATTTGAAACTGTTGTTACTAATTG ACATTACAAAATTTTCAGTGCGTCGATTCAGCAGAGATAATTTGTAAATTGTAACTACTG TTTCATTTTGAAGAGCATGCTAATCATTG