Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0869600-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:37690326:37693116:1 gene:Os01g0869600 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAM, LAG1 and CLN8 homology domain containing protein. (Os01t0869600-01)
Sequence

ATGCCTCCTCCGCCCCATCGCGGCGGCGGCGGCGGCCGCGACACGAGCGCGTTCTTCGCG
GCGACGCTGGTGCTGTGGGCGGTGTCGGTGGGGTTCGAGATCGGCGCGCGCGGGCGGCGG
GAGCTGGCGCCCGTGGCCGCAGGGTTTGCCTTCTTCCAGGCCGCCAGCGCCGCCGTGCGC
GCCGCCGTCTCCCGCGACCCGCTCTTCGTCAACACCGCCGTTTCGCTCCTGCACTCCTCG
CTCACGTCGGCCTCCGTTATCTTTGTTCTTGTCAACCGATGGCATAATAAGGACCTCAAG
AACATGTTTGAGCATGAAGAATTGTTTGGTGGCAGTTGGGTTGGAGCATATTCTGCTCTG
TGCTTTTCTTGTGGCTATTTTGCTTATGATCAATTAGATATGCTTCGTTACCGACTGTAC
AGTGGACGGATTCCTGGAATTCTCATGCACCACCTGATTCTGCTCATTTGCTTTACACTA
GCTCTGTATCGGAATGTGACGATCAACTACCTAATTCTAACTCTTGTATGCGAGCTGCAC
TCCGTATTTTTGCACATAAGGAAATTGAGGCGAATGGCTGGATTTCGGGATTACAACAGA
AAAATTGTGAAACTGGAATGGGTCCTCAACTGGACTACATTTGTATCAGCAAGGGTGGCA
TGCCACATACTGATTACATACAAACTGATCATTGATGCCCACAAGTTTGATAGTGGAATT
GAGCTTCCACTAGCTCTTTTTGGCATGGCAGGAATGAATCTGCTCAACATATTTTTAGGA
CTTGATCTATTAAAAGCTTACACGCTCGAGAGAAATCAGCAGACACATCAGGACTGA

Peptide Sequence

PEP ID

Os01t0869600-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:37690326:37693116:1 gene:Os01g0869600 transcript:Os01t0869600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAM, LAG1 and CLN8 homology domain containing protein. (Os01t0869600-01)
Sequence

MPPPPHRGGGGGRDTSAFFAATLVLWAVSVGFEIGARGRRELAPVAAGFAFFQAASAAVR
AAVSRDPLFVNTAVSLLHSSLTSASVIFVLVNRWHNKDLKNMFEHEELFGGSWVGAYSAL
CFSCGYFAYDQLDMLRYRLYSGRIPGILMHHLILLICFTLALYRNVTINYLILTLVCELH
SVFLHIRKLRRMAGFRDYNRKIVKLEWVLNWTTFVSARVACHILITYKLIIDAHKFDSGI
ELPLALFGMAGMNLLNIFLGLDLLKAYTLERNQQTHQD

Transcript Sequence

Transcript ID

Os01t0869600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:37690326:37693116:1 gene:Os01g0869600 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAM, LAG1 and CLN8 homology domain containing protein. (Os01t0869600-01)
Sequence

GCGTCTCGCCGAGGGAGGGGAAGAGGGAACGGAGTCTATCGTGCGGTGCGGTTCTCCGCT
CGCCACGACGACGACGAGCCCCATGCCTCCTCCGCCCCATCGCGGCGGCGGCGGCGGCCG
CGACACGAGCGCGTTCTTCGCGGCGACGCTGGTGCTGTGGGCGGTGTCGGTGGGGTTCGA
GATCGGCGCGCGCGGGCGGCGGGAGCTGGCGCCCGTGGCCGCAGGGTTTGCCTTCTTCCA
GGCCGCCAGCGCCGCCGTGCGCGCCGCCGTCTCCCGCGACCCGCTCTTCGTCAACACCGC
CGTTTCGCTCCTGCACTCCTCGCTCACGTCGGCCTCCGTTATCTTTGTTCTTGTCAACCG
ATGGCATAATAAGGACCTCAAGAACATGTTTGAGCATGAAGAATTGTTTGGTGGCAGTTG
GGTTGGAGCATATTCTGCTCTGTGCTTTTCTTGTGGCTATTTTGCTTATGATCAATTAGA
TATGCTTCGTTACCGACTGTACAGTGGACGGATTCCTGGAATTCTCATGCACCACCTGAT
TCTGCTCATTTGCTTTACACTAGCTCTGTATCGGAATGTGACGATCAACTACCTAATTCT
AACTCTTGTATGCGAGCTGCACTCCGTATTTTTGCACATAAGGAAATTGAGGCGAATGGC
TGGATTTCGGGATTACAACAGAAAAATTGTGAAACTGGAATGGGTCCTCAACTGGACTAC
ATTTGTATCAGCAAGGGTGGCATGCCACATACTGATTACATACAAACTGATCATTGATGC
CCACAAGTTTGATAGTGGAATTGAGCTTCCACTAGCTCTTTTTGGCATGGCAGGAATGAA
TCTGCTCAACATATTTTTAGGACTTGATCTATTAAAAGCTTACACGCTCGAGAGAAATCA
GCAGACACATCAGGACTGAGTGTGCCTCTACTGATGTGGTACTCCAAAAGTTTTGGCAAG
TTGTAGTCAAACAACAATTAATATAGATCAGCAGACAGAGGTATGTCAATGTGTTATTGG
CCTCTACGTTCGGTAGAAACTAGTAATGATGTACTATATTATGTGTTCTGAACTCATTAT
AAGATCTCTACCAGCAAATGATTCTTTGCTATTGTGCTACTATTTGT