Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0869200-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:37664233:37667335:1 gene:Os01g0869200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MAGNESIUM TRANSPORTER1, Magnesium transporter 1, MRS2/MGT family member 2 description:Magnesium transporter, Mg-mediated aluminum tolerance (Os01t0869200-01)
Sequence

ATGGAGCGGAGGGCGCAGCCGGTGTCGGCGGCGGTGGCGCCGGTGACGGGGAGGAGGAAG
GGTGCGGCGGCGAGCCGGAAGTGGATGGTGGTGCCGGCGGTGGGGGAGGAGCGGAGGGTG
GAGTTTGGGAAGCACCAGATCATGAAGATGACGGGGCTCCCCGGGCGCGACCTCCGGGTG
CTCGACCCGGTCCTCTCCTACCCGTCCACCATCCTCGGCCGCGACCGCGCCATCGTCGTC
AGGCTCCAGGGCGTCAAGGCCATCATCACCGCCACCGAGGTGCTCGTCCCCGACCACGAC
GACGTCCTCCTCGCCTCCTTCCTCCTCGACCTCCGCTCCCGCCTCTCCCTCCCGGATGCG
GCGCCTAGCACGAATCCGGCGGCGGCTGATCGCGGGAACGGGACGGAGCAGGGCGATCAG
GGGAGCGTGCCAGGTCTGGCGATCAGCGGTGCTGGCAACGCCAAGATCCCGCCCTTTGAG
TTCAAGGTGCTCGAGGTCTGCCTCGAGCACGCATGCAAAGACTTGGAATCTCAGACACGC
TCTCTGGAGAAGGAGGCGTATCCGGCCTTGGACAAGCTGGGATCGAAGGTTAGCACGCTG
AACCTGGATCACGTCAGGAATCTGAAGAGCCGCATGGTTGATCTCTCAGGGCGCGTGCAG
AAGATTAGGGATGAGCTGGAGCACTTGCTGGATGACGACATGGACATGTCCGAGATGTAC
CTGACGAGGAAGCTGTCGTTCCAAGGGCTCAGCGGATCGCTGAGCAGAGCGGATTCACAC
AAGTACGCATCTGTTGATCATGACGACGATAGGGAGGAGGAAGACCATGACGATGAGACA
GAGAGTGGCCGTGAAAGTTCTGTTTATGTTAAGCCTGATATAGAAGAGTTGGAAATGCTT
CTGGAAGCTTACTTTGTGCAGATCGATGGAACGCTGAATACCCTGTACCATATCCGTGAA
TACGCGGACGACACGGAGGATTACATCAACATAATGCTGGACGAGAAGCAGAACCAGCTG
CTGCAGATGGGCGTGATGCTGACGACGGCGACGGTGGTGGTCACCGCGGGCATCGTGGTG
GTGAGCCTGTTCGGCATGAACATCCACATCGACCTGATGAAAGACCCGGAGACCCCCGAG
ATGGTGAGGATGTCCAACATGCACTTTTGGGAGACCACCTTCGGCACGGTCGCCGGCTGC
ATCGCCATATACCTCCTGGCGATCTACGCTGGGAGGAAGAGCAAGATCCTGCAGTGA

Peptide Sequence

PEP ID

Os01t0869200-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:37664233:37667335:1 gene:Os01g0869200 transcript:Os01t0869200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MAGNESIUM TRANSPORTER1, Magnesium transporter 1, MRS2/MGT family member 2 description:Magnesium transporter, Mg-mediated aluminum tolerance (Os01t0869200-01)
Sequence

MERRAQPVSAAVAPVTGRRKGAAASRKWMVVPAVGEERRVEFGKHQIMKMTGLPGRDLRV
LDPVLSYPSTILGRDRAIVVRLQGVKAIITATEVLVPDHDDVLLASFLLDLRSRLSLPDA
APSTNPAAADRGNGTEQGDQGSVPGLAISGAGNAKIPPFEFKVLEVCLEHACKDLESQTR
SLEKEAYPALDKLGSKVSTLNLDHVRNLKSRMVDLSGRVQKIRDELEHLLDDDMDMSEMY
LTRKLSFQGLSGSLSRADSHKYASVDHDDDREEEDHDDETESGRESSVYVKPDIEELEML
LEAYFVQIDGTLNTLYHIREYADDTEDYINIMLDEKQNQLLQMGVMLTTATVVVTAGIVV
VSLFGMNIHIDLMKDPETPEMVRMSNMHFWETTFGTVAGCIAIYLLAIYAGRKSKILQ

Transcript Sequence

Transcript ID

Os01t0869200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:37664233:37667335:1 gene:Os01g0869200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MAGNESIUM TRANSPORTER1, Magnesium transporter 1, MRS2/MGT family member 2 description:Magnesium transporter, Mg-mediated aluminum tolerance (Os01t0869200-01)
Sequence

AGCCGCCACCGGGGTCACCACCATCGAGCTCGTATGGAGCGGAGGGCGCAGCCGGTGTCG
GCGGCGGTGGCGCCGGTGACGGGGAGGAGGAAGGGTGCGGCGGCGAGCCGGAAGTGGATG
GTGGTGCCGGCGGTGGGGGAGGAGCGGAGGGTGGAGTTTGGGAAGCACCAGATCATGAAG
ATGACGGGGCTCCCCGGGCGCGACCTCCGGGTGCTCGACCCGGTCCTCTCCTACCCGTCC
ACCATCCTCGGCCGCGACCGCGCCATCGTCGTCAGGCTCCAGGGCGTCAAGGCCATCATC
ACCGCCACCGAGGTGCTCGTCCCCGACCACGACGACGTCCTCCTCGCCTCCTTCCTCCTC
GACCTCCGCTCCCGCCTCTCCCTCCCGGATGCGGCGCCTAGCACGAATCCGGCGGCGGCT
GATCGCGGGAACGGGACGGAGCAGGGCGATCAGGGGAGCGTGCCAGGTCTGGCGATCAGC
GGTGCTGGCAACGCCAAGATCCCGCCCTTTGAGTTCAAGGTGCTCGAGGTCTGCCTCGAG
CACGCATGCAAAGACTTGGAATCTCAGACACGCTCTCTGGAGAAGGAGGCGTATCCGGCC
TTGGACAAGCTGGGATCGAAGGTTAGCACGCTGAACCTGGATCACGTCAGGAATCTGAAG
AGCCGCATGGTTGATCTCTCAGGGCGCGTGCAGAAGATTAGGGATGAGCTGGAGCACTTG
CTGGATGACGACATGGACATGTCCGAGATGTACCTGACGAGGAAGCTGTCGTTCCAAGGG
CTCAGCGGATCGCTGAGCAGAGCGGATTCACACAAGTACGCATCTGTTGATCATGACGAC
GATAGGGAGGAGGAAGACCATGACGATGAGACAGAGAGTGGCCGTGAAAGTTCTGTTTAT
GTTAAGCCTGATATAGAAGAGTTGGAAATGCTTCTGGAAGCTTACTTTGTGCAGATCGAT
GGAACGCTGAATACCCTGTACCATATCCGTGAATACGCGGACGACACGGAGGATTACATC
AACATAATGCTGGACGAGAAGCAGAACCAGCTGCTGCAGATGGGCGTGATGCTGACGACG
GCGACGGTGGTGGTCACCGCGGGCATCGTGGTGGTGAGCCTGTTCGGCATGAACATCCAC
ATCGACCTGATGAAAGACCCGGAGACCCCCGAGATGGTGAGGATGTCCAACATGCACTTT
TGGGAGACCACCTTCGGCACGGTCGCCGGCTGCATCGCCATATACCTCCTGGCGATCTAC
GCTGGGAGGAAGAGCAAGATCCTGCAGTGATGCTTCCCAACAGAGGAAGCTAAGCGTCAG
GTTGCGAGTTCTGCAGCCTGGCTGCGATTTTGCTGGGCAGTGGCGTAGTTGATAGGTTGT
GTATGGATGTGATGCATTTTTGTTGATTTCGTATGGTGTGGGAGCAATAATAATCGAACG
ATCTCTCTCCATTTCCTGCTCTTATTAGAAGTTAGCACTTAGCACTACTATGTTAAATTT
CGGCCAAAGGAACCACTATGTTAAATTTCGGCCAAAGGAACCCTTTCAGAAATGCTCTTG
CCACATTTCGCATTCGAAGTAAATCCAAAAAAGGTACCAGTAATTCTCAT