Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0866800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:37535953:37539344:1 gene:Os01g0866800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tubby-like protein 5, tubby-like protein 3, F-box protein 50 description:Similar to F24P17.15 protein (Tubby-like protein TULP9). (Os01t0866800-01)
Sequence	ATGTCGTTTCGTAGCATAGTTCGCGATGTCCGGGATGGTTTTGGAAGCTTGTCAAGAAGG AGCTTTGAGGTGACCCTTGCAAGTCTTTATGGACTTACTGGGCATCACAAAGGGAAGACT CAGAGCTCATTGGATGAGCTCGATGACTCACCTGCTATAATCCCAGAGAGCCGCTGGGCA AGTCTTCCGCCCGAACTCCTCCGTGAGGTCATACGGAGACTGGAGGCTGATGAGAGTACA TGGCCATCCCGAAGGAATGTCGTCTGCTTTGCAGCTGTTTGTAGGACATGGAGGGAAATG TGTAAAGAGACTGTGTTGAGCCCAGAGTTTTGTGGGAAACTTACCTTTCCGGTCTCTATA AAGCAGCCTGGTCCTCGAGATGGTATGATTCAATGTTATATAAAGAGGAATAGATCAAAA TCCACCTACCATCTCTATCTGTGCCTTAGCAACGTTGTTACTGCGGAAGGTGGGAAATTC GTCTTAGCCGCTAAAAGACACCGTAAAACAACTTGCACAGAGTACACTATTTCAATGGTT TCTGGCAACATCTCAAGGTCGAGCAGAACTAATATTGGAAAATTGAGGTCAAATTTCCTT GGCACAAAATTTATAATTTATGACACACAGCCCCCTTACAATGGGGCTGTAGTCCCTCAC GTCGGAAGGACCAGCAAGAGATTTAACTCAACGAAAGTTTCTCCGAAGGTTCCTTCTGTT ACTTATAACATAGCTCAGGTGAGCTATGAACTAAATGTCCTTGGCACAAGAGGTCCTAGA CGGATGCGTTGCATGATGCACTCCATACCTGCCTCCTCGGTGGAGCCTGGTGGCATAGTC CCTGGCCAGCCTGAGCAAATTGTACCTCGAGCTCTGGAGGACTCATTTCGCAGCACCACC TCCTTCTCTCAATCATTCCGGAGCACCACCTCCTTCTCTAAGTCCATCATGGACCCATCC ATGGATTTCAGTAGTGCTCGCTTCTCTGACATCAGTGGTTCTATAATGGGTGGTGATGAC AATGGTGAAATCAAGGAGAGGCCCTTAGTGCTCCGTAACAAGCCCCCGAGATGGCATGAG CAGCTACAGTGCTGGTGCCTGAACTTCCGTGGCCGTGTCACCATTGCCTCAGTGAAGAAT TTCCAGCTGGTTGCTGCACCAAGCCCTCCTCCTGCTGGTGCTCCAACTCCTTCGCAACCT GGTCCAGCCGACCCCGAAAAGGTTATTCTGCAGTTTGGAAAAGTTGCAAGGGATATGTTC ACAATGGACTACCGCTATCCTCTCTCTGCCTTCCAGGCTTTCGCTATTTGTTTGAGCAGT TTCGACACGAAATTGGCATGTGAATAA

Peptide Sequence

PEP ID	Os01t0866800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:37535953:37539344:1 gene:Os01g0866800 transcript:Os01t0866800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tubby-like protein 5, tubby-like protein 3, F-box protein 50 description:Similar to F24P17.15 protein (Tubby-like protein TULP9). (Os01t0866800-01)
Sequence	MSFRSIVRDVRDGFGSLSRRSFEVTLASLYGLTGHHKGKTQSSLDELDDSPAIIPESRWA SLPPELLREVIRRLEADESTWPSRRNVVCFAAVCRTWREMCKETVLSPEFCGKLTFPVSI KQPGPRDGMIQCYIKRNRSKSTYHLYLCLSNVVTAEGGKFVLAAKRHRKTTCTEYTISMV SGNISRSSRTNIGKLRSNFLGTKFIIYDTQPPYNGAVVPHVGRTSKRFNSTKVSPKVPSV TYNIAQVSYELNVLGTRGPRRMRCMMHSIPASSVEPGGIVPGQPEQIVPRALEDSFRSTT SFSQSFRSTTSFSKSIMDPSMDFSSARFSDISGSIMGGDDNGEIKERPLVLRNKPPRWHE QLQCWCLNFRGRVTIASVKNFQLVAAPSPPPAGAPTPSQPGPADPEKVILQFGKVARDMF TMDYRYPLSAFQAFAICLSSFDTKLACE

Transcript Sequence

Transcript ID	Os01t0866800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:37535953:37539344:1 gene:Os01g0866800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tubby-like protein 5, tubby-like protein 3, F-box protein 50 description:Similar to F24P17.15 protein (Tubby-like protein TULP9). (Os01t0866800-01)
Sequence	CACCCGCCTTCCCTTTCCTCTCTTCTCCTCTACTCCTCGCCTTCTTCTTCTTCTTCTTCT TCTTCTTCTTCCTCTTGCTGTTCTTCGCTCGCGCCCGCCCACCACTGCAACTCCTCGTCT CCCCCTCCGCCGCGTTGCCGGGTGGAGTTGCCTTGCCCGAGAGGAGCGGGCACTTCGGGT TTGTGAGAGTGAGAGCTCTGTGCAGCGGACAGGTTTGAGGCGGCGGCGGCGGGGCTCCCA CTCGGCCGAATGGACTGCTAGTAGCGGTTGCTTCTATGTGTACAGTATCTAACCTTCTAA CCATTTTCAAAGGAGGTCATATTTTGTAGGGCATCGTATGCCTTATTATCTGGCATTGGC TGGTTTAGATGTCGTTTCGTAGCATAGTTCGCGATGTCCGGGATGGTTTTGGAAGCTTGT CAAGAAGGAGCTTTGAGGTGACCCTTGCAAGTCTTTATGGACTTACTGGGCATCACAAAG GGAAGACTCAGAGCTCATTGGATGAGCTCGATGACTCACCTGCTATAATCCCAGAGAGCC GCTGGGCAAGTCTTCCGCCCGAACTCCTCCGTGAGGTCATACGGAGACTGGAGGCTGATG AGAGTACATGGCCATCCCGAAGGAATGTCGTCTGCTTTGCAGCTGTTTGTAGGACATGGA GGGAAATGTGTAAAGAGACTGTGTTGAGCCCAGAGTTTTGTGGGAAACTTACCTTTCCGG TCTCTATAAAGCAGCCTGGTCCTCGAGATGGTATGATTCAATGTTATATAAAGAGGAATA GATCAAAATCCACCTACCATCTCTATCTGTGCCTTAGCAACGTTGTTACTGCGGAAGGTG GGAAATTCGTCTTAGCCGCTAAAAGACACCGTAAAACAACTTGCACAGAGTACACTATTT CAATGGTTTCTGGCAACATCTCAAGGTCGAGCAGAACTAATATTGGAAAATTGAGGTCAA ATTTCCTTGGCACAAAATTTATAATTTATGACACACAGCCCCCTTACAATGGGGCTGTAG TCCCTCACGTCGGAAGGACCAGCAAGAGATTTAACTCAACGAAAGTTTCTCCGAAGGTTC CTTCTGTTACTTATAACATAGCTCAGGTGAGCTATGAACTAAATGTCCTTGGCACAAGAG GTCCTAGACGGATGCGTTGCATGATGCACTCCATACCTGCCTCCTCGGTGGAGCCTGGTG GCATAGTCCCTGGCCAGCCTGAGCAAATTGTACCTCGAGCTCTGGAGGACTCATTTCGCA GCACCACCTCCTTCTCTCAATCATTCCGGAGCACCACCTCCTTCTCTAAGTCCATCATGG ACCCATCCATGGATTTCAGTAGTGCTCGCTTCTCTGACATCAGTGGTTCTATAATGGGTG GTGATGACAATGGTGAAATCAAGGAGAGGCCCTTAGTGCTCCGTAACAAGCCCCCGAGAT GGCATGAGCAGCTACAGTGCTGGTGCCTGAACTTCCGTGGCCGTGTCACCATTGCCTCAG TGAAGAATTTCCAGCTGGTTGCTGCACCAAGCCCTCCTCCTGCTGGTGCTCCAACTCCTT CGCAACCTGGTCCAGCCGACCCCGAAAAGGTTATTCTGCAGTTTGGAAAAGTTGCAAGGG ATATGTTCACAATGGACTACCGCTATCCTCTCTCTGCCTTCCAGGCTTTCGCTATTTGTT TGAGCAGTTTCGACACGAAATTGGCATGTGAATAATTGTTGGAAGAAGGAAAAACTGAAG AAGGGCAAGAAAAGAGTTCAGATGTCTGGGGATAGGTTACTAGTTGATGTTTGCATTTTT TTTTCTTGTTTTCTCGGTTGTAATTGTGCTTGTTGTAGCCTTGAACTAGACGTATATGCA GGAAAGCATGTTTTTATGTGCCCTCATGCATGATAGAGGTAAGGAGCCACATATCATCCA CTGATCCATACTCCATACTGTGATGATGTATCTGCTGTGCCATTGCCAACACAACTGTGA AAGGTTCCCTCC