Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0865800-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:37472239:37473548:-1 gene:Os01g0865800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Dof zinc factor 1, Dof transcription factor 1 description:Similar to AOBP (Ascorbate oxidase promoter-binding protein). (Os01t0865800-00)
Sequence

ATGTTGTCGTCGTCGCACCACGAGGCGATGCTGCCGTACGCGCCGCGGCCGCCGTCGCTG
CTGGTGGATCGCCGGTACAAGCAGGGCGCCGAGGCGGCGCCCAACTGCCCGCGCTGCGAC
TCGCCCAACACCAAGTTCTGCTACTACAACAACTACAGCCTCAGCCAGCCGCGCTACTTC
TGCAAGGGATGCCGCCGGTACTGGACCAAGGGCGGCTCGCTCCGCAACGTCCCCGTCGGC
GGCGGCTGCCGCAAGAACCGCCGCGGGAAGTCCTCGTCGTCGGCGCGGTCGGCGGCCGAC
GCCGTCTCGAGCGGCCGCGACGCGGCGTTCGGCCACCGGTTCCCCGGCCCGGTCCGGCCT
GACATGGTCCTGGAAGGCATGGTCGGGAACCCGGCGAACCCCGGCCAGGCGATGCCCGAC
GTCGCCGCCGCGGCGGACGGCTCGACCATCGACCTCGCAATGCTGTACGCCAAGTTTCTG
AACCACCCGCCGACCGACGCCGGGCTCGGCGCCGTCACGCCGGAGTCGGGAGGGCACGTC
GACGAGGCGTTCGACACGTTCAGCGCGTCCAGCGATCTGAGCCCCGGCATCCTGGCGGCG
GCGTCGGCGCAGTTCGACCCGAACCAGGACGGGTTCGGCGAGTGGTCCAGTCCAGCGAGC
GGCAACGACCCGACGAGTACTGCAACCACCGCAACCACCTCCATGCTGTGCACGGACGCG
AGCGTGCAAGCCGCGCTCGGCGAGCTCAACTTCGCCATGGATCAGAGCTGCTTCGACTCG
CTAGGTTTGCCCACGGACGTCGCCGGCGCCGGCAGCCTGTCGTCGTGGTGCTCGATCGTG
CCGAGCTTGTCGACATGGGAGGAGCCCAAGTACGACTCGTTGGATTCGTTTCCCGACGAC
GCCATGAGCCTCCATGAGTGCATGATCGGCGCTCCTGATCATGATTGGAGCGTGGATTGC
CAAGGATTGGAGGCTCTTTACATGCCATAA

Peptide Sequence

PEP ID

Os01t0865800-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:37472239:37473548:-1 gene:Os01g0865800 transcript:Os01t0865800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Dof zinc factor 1, Dof transcription factor 1 description:Similar to AOBP (Ascorbate oxidase promoter-binding protein). (Os01t0865800-00)
Sequence

MLSSSHHEAMLPYAPRPPSLLVDRRYKQGAEAAPNCPRCDSPNTKFCYYNNYSLSQPRYF
CKGCRRYWTKGGSLRNVPVGGGCRKNRRGKSSSSARSAADAVSSGRDAAFGHRFPGPVRP
DMVLEGMVGNPANPGQAMPDVAAAADGSTIDLAMLYAKFLNHPPTDAGLGAVTPESGGHV
DEAFDTFSASSDLSPGILAAASAQFDPNQDGFGEWSSPASGNDPTSTATTATTSMLCTDA
SVQAALGELNFAMDQSCFDSLGLPTDVAGAGSLSSWCSIVPSLSTWEEPKYDSLDSFPDD
AMSLHECMIGAPDHDWSVDCQGLEALYMP

Transcript Sequence

Transcript ID

Os01t0865800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:37472239:37473548:-1 gene:Os01g0865800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Dof zinc factor 1, Dof transcription factor 1 description:Similar to AOBP (Ascorbate oxidase promoter-binding protein). (Os01t0865800-00)
Sequence

CCCTCTCTTGCCACCTCCATCAATCAATTCCTCTCGCGCCACCGATCGATCGAGCTGAGC
TAACATCTCACATCACCATATATATTCTTGGCCGCAAGCGAGCTAGCTATCTCTAGCTTG
GAGGCTGCTGATCGCGATCGAGCCGAGAGATCGATGTTGTCGTCGTCGCACCACGAGGCG
ATGCTGCCGTACGCGCCGCGGCCGCCGTCGCTGCTGGTGGATCGCCGGTACAAGCAGGGC
GCCGAGGCGGCGCCCAACTGCCCGCGCTGCGACTCGCCCAACACCAAGTTCTGCTACTAC
AACAACTACAGCCTCAGCCAGCCGCGCTACTTCTGCAAGGGATGCCGCCGGTACTGGACC
AAGGGCGGCTCGCTCCGCAACGTCCCCGTCGGCGGCGGCTGCCGCAAGAACCGCCGCGGG
AAGTCCTCGTCGTCGGCGCGGTCGGCGGCCGACGCCGTCTCGAGCGGCCGCGACGCGGCG
TTCGGCCACCGGTTCCCCGGCCCGGTCCGGCCTGACATGGTCCTGGAAGGCATGGTCGGG
AACCCGGCGAACCCCGGCCAGGCGATGCCCGACGTCGCCGCCGCGGCGGACGGCTCGACC
ATCGACCTCGCAATGCTGTACGCCAAGTTTCTGAACCACCCGCCGACCGACGCCGGGCTC
GGCGCCGTCACGCCGGAGTCGGGAGGGCACGTCGACGAGGCGTTCGACACGTTCAGCGCG
TCCAGCGATCTGAGCCCCGGCATCCTGGCGGCGGCGTCGGCGCAGTTCGACCCGAACCAG
GACGGGTTCGGCGAGTGGTCCAGTCCAGCGAGCGGCAACGACCCGACGAGTACTGCAACC
ACCGCAACCACCTCCATGCTGTGCACGGACGCGAGCGTGCAAGCCGCGCTCGGCGAGCTC
AACTTCGCCATGGATCAGAGCTGCTTCGACTCGCTAGGTTTGCCCACGGACGTCGCCGGC
GCCGGCAGCCTGTCGTCGTGGTGCTCGATCGTGCCGAGCTTGTCGACATGGGAGGAGCCC
AAGTACGACTCGTTGGATTCGTTTCCCGACGACGCCATGAGCCTCCATGAGTGCATGATC
GGCGCTCCTGATCATGATTGGAGCGTGGATTGCCAAGGATTGGAGGCTCTTTACATGCCA
TAAATATATATACGATTAAAATTTTTTCTTCTAGCTAATCGATCTCATGCTATTCTTGCG
ATTGGTTTGTAACTTTTTTCTTTTGTTTCTGTTTGGAAGAACTACATATAGAGCTATGCT
TGTTTTGAAGAGGGAGAGGGTGAGCTAGGTGCTAGATCACTCATGTGAAG