Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0865600-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:37457573:37463375:1 gene:Os01g0865600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 149 description:Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os01t0865600-01);Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os01t0865600-02)
Sequence	ATGGCGGGCGCCGCCCCGCTGCGCGACTCCCTCCGCCGCCTCTGCACCGACGTCGGCTGG TCCTACGCCGTCTTCTGGAGGGCCACCCGCGCCGCCGACTCCCAGCGGTTGAAATTGGTG TGGGGGGATGGGCACTATGAGCGGGCGGCCGGAGCGCCGTCGATCTCCGGCTTCGAGGCC ATGGACCTGCTGCTCAAGGAGAAGGCCGCGGCGTTGCGGAGCGGCACCGGGCGCGGTGGT GGCGGCGGCGAGGGGCACGCGGCTGATGGCGCCGCGGGACACAGCCATGACAGGGTGGAC GCGCTCGTGCACAAGGCCATGGCGCAACAGGTCCACGTCGTGGGAGAAGGGGTGATTGGT CAGGCTGCACTGACAGGGTTGCATCGGTGGATCGTTCACGATATTGTTGATGAGTGTGAG GAAGAAGATGAGGTATTGCTAGAGATGAAGGGCCAGTTTTGTGCAGGAATACAGACAATT GCAGTGATACCTGTCCTTCCACGAGGCGTTATTCAGCTTGGCTCCACAAAAATGGTTATG GAGGAAGCAGCATTTATAGATCATGTCAGATCTTTGTTTCAGCAGCTGGGTAGTTCAACT GCAGTTGTTCCGTGTGGTTCCTTTGTACAAGATTCGATTATGAGAACTCCATTTCACAAA TCACTTGGTGTGCCTACCTCTTCGCACTCGGAAGACCTTGCTGGTGGTGGAAATACTTAT AATGATGACATGATTAACCACCAGTTCAGGCATCAGAAGTCACCAGCCTCGACAATTCAG TCATTTAACCCTGTACAACAGTTCTATGCTGGGCCTACTTTCTGTCGTCCAGTAACTATT GCATCACGTTGTGATCTCTTCCAACCTGACCATGGATCAACCTTTACTTTGAACAGTCAG TCAGAGGACAATAGATCGACAGCTTTACTCAAAAATAGTGTTTCACATTCTAAAACATCA AATGATGCCTTTTCACACGCTTTTAACCCCCTCAATGAACCCAACGTCTCCATTTCAGGC AGAAGAGAGTGTGTAAGCATAGAACAACATGGTTCTTGCCGTAATGGAGAAATGGAAATA ACAATAGGCCGCACTGCTTCTTCAAGTTGTACAGGCAAAACAAATATTATCAATAAAGTG GATGATTTGCTGAGTCAGGATTGTTTGGTAGGTTGTCAGGCAAGCAATGCCACATCTGTG AACAGAAAGTTTCAGACAATGTCCATTGTTGATAATACAAAGCTTCAAGATGGTTCTTAT GCAATTCCACATGCTGCACTTGTTGACTCTACCCAATATTCAGACTGCTTTCAATCGCTT CTTGGCACAATCCAAGGTAGTTCTTCCAGCAATTCAAATGCAATTCATGTGGATACTTCT CATAATGCTGTCCATGGAAAGAGTAACTTTTGCCCTTTAGGAGATAGGAATGCTGCTAAT TCAAGTGACTTGGCTGAACTTCTGGCATCGCCAATACCATTAGAGTTGACTGGGGGAAAC GATTTGTTTGATGTACTGCAACTTCAGCAGAAGCCAAATGGTTCAAATAATAGTGAAGTA AACAATCGTCAATCAATGCCTTATGGTTCAGAGCAAGCTGTTAAGTCTCTGATTGGATGT GTGGATGATGATTTCACTGGATTGATCACAGAAGCTGATCCAGACCAGCTCCTGGATGCA ATAGTTTCAAAGATAATCACAGGGCACAAGCAGAACGTGGATACCAGTGCTTCTTGTAGT ACTACAGTGGCAGGCTTTGACAGACCACTTCATTCTGATTGCCACCTATATACCACAGGA CCATCATCAGGGCCAATATTTTGTAATTTTGCCAGTGTTGCTCCTGTAGCAATTAAAACT GAAGGGCCTGCTGCAGGTTCCAGGCAATCATCTTCTAGTATAGATAAATCTGCAGGATGC TCTCAGACACAGGAAAGTTACAAATCACAGATAAGGCTTTGGGTTGAGAATAACCATAGT GTAGGATCAGATAGTCTTTCAACTGGACAAGCATCTGACAGTCTTTCAACTGGACAGTGT AAAAGGAGTGATGAAATAGGTAAATCAAACCGAAAGAGATCTAGACCAGGGGAGAGTGCA AGACCGAGGCCTAAAGATCGGCAAATGATTCAAGACCGTATAAAGGAGCTTCGTGAAATA GTACCTAACAGTGCAAAGTGTAGCATTGATACATTACTGGAGAAGACCATTAAGCATATG CTTTTCTTGCAAAATGTTGCAAAGCATGCTGATAAGTTGAAGGGATCTGGGGAGCCAAAG ATTGTTAGTCATGAAGAAGGTTTGCTCTTGAAAGATAACTTTGAAGGTGGTGCAACCTGG GCCTTTGAAGTTGGTACGCGATCTATGACATGTCCAATCATAGTAGAGGATCTCAATCCA CCCCGTCAAATGCTTGTGGAGATGCTTTGTAAAGAGAGAGGAATCTTCTTGGAAATAGCT GATCAAATTAGAGGTTTAGGGTTGACTATCTTGAAAGGTGTGATGGAAGTTCGTAAAGAT AAGATTTGGGCTCGCTTTGCTGTTGAGGCAAACAAGGATGTAACTCGGATGGAAATATTT CTTTCTCTTGTCCATCTTCTGGAACCTAGCACTGGGAGCTCTATTTTGTCAGCAGGTGTT GAGAACACTAGCCTGCCGCGCGATAGTTTCTTTCCATCGTCTATTCCAGCCTCTGGTTTC TCCAACTGCTTGTGA

Peptide Sequence

PEP ID	Os01t0865600-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:37457573:37463375:1 gene:Os01g0865600 transcript:Os01t0865600-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 149 description:Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os01t0865600-01);Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os01t0865600-02)
Sequence	MAGAAPLRDSLRRLCTDVGWSYAVFWRATRAADSQRLKLVWGDGHYERAAGAPSISGFEA MDLLLKEKAAALRSGTGRGGGGGEGHAADGAAGHSHDRVDALVHKAMAQQVHVVGEGVIG QAALTGLHRWIVHDIVDECEEEDEVLLEMKGQFCAGIQTIAVIPVLPRGVIQLGSTKMVM EEAAFIDHVRSLFQQLGSSTAVVPCGSFVQDSIMRTPFHKSLGVPTSSHSEDLAGGGNTY NDDMINHQFRHQKSPASTIQSFNPVQQFYAGPTFCRPVTIASRCDLFQPDHGSTFTLNSQ SEDNRSTALLKNSVSHSKTSNDAFSHAFNPLNEPNVSISGRRECVSIEQHGSCRNGEMEI TIGRTASSSCTGKTNIINKVDDLLSQDCLVGCQASNATSVNRKFQTMSIVDNTKLQDGSY AIPHAALVDSTQYSDCFQSLLGTIQGSSSSNSNAIHVDTSHNAVHGKSNFCPLGDRNAAN SSDLAELLASPIPLELTGGNDLFDVLQLQQKPNGSNNSEVNNRQSMPYGSEQAVKSLIGC VDDDFTGLITEADPDQLLDAIVSKIITGHKQNVDTSASCSTTVAGFDRPLHSDCHLYTTG PSSGPIFCNFASVAPVAIKTEGPAAGSRQSSSSIDKSAGCSQTQESYKSQIRLWVENNHS VGSDSLSTGQASDSLSTGQCKRSDEIGKSNRKRSRPGESARPRPKDRQMIQDRIKELREI VPNSAKCSIDTLLEKTIKHMLFLQNVAKHADKLKGSGEPKIVSHEEGLLLKDNFEGGATW AFEVGTRSMTCPIIVEDLNPPRQMLVEMLCKERGIFLEIADQIRGLGLTILKGVMEVRKD KIWARFAVEANKDVTRMEIFLSLVHLLEPSTGSSILSAGVENTSLPRDSFFPSSIPASGF SNCL

Transcript Sequence

Transcript ID	Os01t0865600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:37457573:37463375:1 gene:Os01g0865600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 149 description:Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os01t0865600-01);Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os01t0865600-02)
Sequence	ACCAATCCCCCCACTCCCGGTCCCCTCGGATTCCGCCCATGCCGCCTTCCCGCCGAGAGC CCTAGCCAAGCCCGCTCGCTGCTTGCTAACCCCCCTCCGCGCGCGCTCACCCGAGTCCTA GGGTTCCAGCGAGCGGCGAGGAGGTAGCTCGTTCGCGCGCGCGTCAAATCCCATGGCGGG CGCCGCCCCGCTGCGCGACTCCCTCCGCCGCCTCTGCACCGACGTCGGCTGGTCCTACGC CGTCTTCTGGAGGGCCACCCGCGCCGCCGACTCCCAGCGGTTGAAATTGGTGTGGGGGGA TGGGCACTATGAGCGGGCGGCCGGAGCGCCGTCGATCTCCGGCTTCGAGGCCATGGACCT GCTGCTCAAGGAGAAGGCCGCGGCGTTGCGGAGCGGCACCGGGCGCGGTGGTGGCGGCGG CGAGGGGCACGCGGCTGATGGCGCCGCGGGACACAGCCATGACAGGGTGGACGCGCTCGT GCACAAGGCCATGGCGCAACAGGTCCACGTCGTGGGAGAAGGGGTGATTGGTCAGGCTGC ACTGACAGGGTTGCATCGGTGGATCGTTCACGATATTGTTGATGAGTGTGAGGAAGAAGA TGAGGTATTGCTAGAGATGAAGGGCCAGTTTTGTGCAGGAATACAGACAATTGCAGTGAT ACCTGTCCTTCCACGAGGCGTTATTCAGCTTGGCTCCACAAAAATGGTTATGGAGGAAGC AGCATTTATAGATCATGTCAGATCTTTGTTTCAGCAGCTGGGTAGTTCAACTGCAGTTGT TCCGTGTGGTTCCTTTGTACAAGATTCGATTATGAGAACTCCATTTCACAAATCACTTGG TGTGCCTACCTCTTCGCACTCGGAAGACCTTGCTGGTGGTGGAAATACTTATAATGATGA CATGATTAACCACCAGTTCAGGCATCAGAAGTCACCAGCCTCGACAATTCAGTCATTTAA CCCTGTACAACAGTTCTATGCTGGGCCTACTTTCTGTCGTCCAGTAACTATTGCATCACG TTGTGATCTCTTCCAACCTGACCATGGATCAACCTTTACTTTGAACAGTCAGTCAGAGGA CAATAGATCGACAGCTTTACTCAAAAATAGTGTTTCACATTCTAAAACATCAAATGATGC CTTTTCACACGCTTTTAACCCCCTCAATGAACCCAACGTCTCCATTTCAGGCAGAAGAGA GTGTGTAAGCATAGAACAACATGGTTCTTGCCGTAATGGAGAAATGGAAATAACAATAGG CCGCACTGCTTCTTCAAGTTGTACAGGCAAAACAAATATTATCAATAAAGTGGATGATTT GCTGAGTCAGGATTGTTTGGTAGGTTGTCAGGCAAGCAATGCCACATCTGTGAACAGAAA GTTTCAGACAATGTCCATTGTTGATAATACAAAGCTTCAAGATGGTTCTTATGCAATTCC ACATGCTGCACTTGTTGACTCTACCCAATATTCAGACTGCTTTCAATCGCTTCTTGGCAC AATCCAAGGTAGTTCTTCCAGCAATTCAAATGCAATTCATGTGGATACTTCTCATAATGC TGTCCATGGAAAGAGTAACTTTTGCCCTTTAGGAGATAGGAATGCTGCTAATTCAAGTGA CTTGGCTGAACTTCTGGCATCGCCAATACCATTAGAGTTGACTGGGGGAAACGATTTGTT TGATGTACTGCAACTTCAGCAGAAGCCAAATGGTTCAAATAATAGTGAAGTAAACAATCG TCAATCAATGCCTTATGGTTCAGAGCAAGCTGTTAAGTCTCTGATTGGATGTGTGGATGA TGATTTCACTGGATTGATCACAGAAGCTGATCCAGACCAGCTCCTGGATGCAATAGTTTC AAAGATAATCACAGGGCACAAGCAGAACGTGGATACCAGTGCTTCTTGTAGTACTACAGT GGCAGGCTTTGACAGACCACTTCATTCTGATTGCCACCTATATACCACAGGACCATCATC AGGGCCAATATTTTGTAATTTTGCCAGTGTTGCTCCTGTAGCAATTAAAACTGAAGGGCC TGCTGCAGGTTCCAGGCAATCATCTTCTAGTATAGATAAATCTGCAGGATGCTCTCAGAC ACAGGAAAGTTACAAATCACAGATAAGGCTTTGGGTTGAGAATAACCATAGTGTAGGATC AGATAGTCTTTCAACTGGACAAGCATCTGACAGTCTTTCAACTGGACAGTGTAAAAGGAG TGATGAAATAGGTAAATCAAACCGAAAGAGATCTAGACCAGGGGAGAGTGCAAGACCGAG GCCTAAAGATCGGCAAATGATTCAAGACCGTATAAAGGAGCTTCGTGAAATAGTACCTAA CAGTGCAAAGTGTAGCATTGATACATTACTGGAGAAGACCATTAAGCATATGCTTTTCTT GCAAAATGTTGCAAAGCATGCTGATAAGTTGAAGGGATCTGGGGAGCCAAAGATTGTTAG TCATGAAGAAGGTTTGCTCTTGAAAGATAACTTTGAAGGTGGTGCAACCTGGGCCTTTGA AGTTGGTACGCGATCTATGACATGTCCAATCATAGTAGAGGATCTCAATCCACCCCGTCA AATGCTTGTGGAGATGCTTTGTAAAGAGAGAGGAATCTTCTTGGAAATAGCTGATCAAAT TAGAGGTTTAGGGTTGACTATCTTGAAAGGTGTGATGGAAGTTCGTAAAGATAAGATTTG GGCTCGCTTTGCTGTTGAGGCAAACAAGGATGTAACTCGGATGGAAATATTTCTTTCTCT TGTCCATCTTCTGGAACCTAGCACTGGGAGCTCTATTTTGTCAGCAGGTGTTGAGAACAC TAGCCTGCCGCGCGATAGTTTCTTTCCATCGTCTATTCCAGCCTCTGGTTTCTCCAACTG CTTGTGACACGATGTACCATACCTCAGCAAGTGGAGCGCTGTGAGTGGGTAAAGTTTCAC CTGCCGTGACCTTTTCTCCCTGCCTTGTTCTAGCTGCC