Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0863400-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:37360416:37363396:-1 gene:Os01g0863400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical protein. (Os01t0863400-01)
Sequence

ATGGAGAGCGGCGCGAACGCACGGCGGCGGCGGCGGCTGGTGGATAGGGGATCCGATCGC
CTCGCCTTCATCACCGGCCAAGCTCAGAGCCTCCCCTCCGATCCGTCCCCAGATTCACCA
CTTTATACTGTTGATGCTGCTTCCCTTCAGCGATCTGAACGTCAGCTAAATGAAGTTGGC
ATTGGTGATGACATATTCAACTACATAACTCAGTTGCAAAAATCAGAATCTGGTGTTCAA
CCGACTAGTGAGGCCCACCTGGAAACTCATAAAGAGAAACACCAAGGTAATGAAAGTGAC
CTCCAAAAGCTCAAGACAAGCAATGTGGTTCCTGAAATTCAGCCAGTAAATGAAAAGGCA
TTTCAAAGGCACAGTGAGGAAACCCTCAGGAAGAAGAACAGTCATGACAGATCGGCAAGT
ACACAGCCTATGAGGGAAATGGAAACAAGATCCAGATATGTGCCTCCAAATCAGTCTAAT
CAATCTGATAGTGCAGGTTGGTCTGTGGAAACTCTGAAGGAAATCCTGAATTTCGCACCA
CATGAGATTACCCAGGCCATATCAGCTACAGAGTATAACCGATTTTTGGCTTCCGTCATC
ATTGGTTTTCTGGTGGTTCTTTCAAATTGGGGGCTGGACGTTGGTGGCACTATCACCAAA
GTATTAGTTGCTACAAGGCCAATTCTATTTCTTATTGTAACGAACATAACCATTGTCTTC
ACTTTGTTGATGGAGAACAAGGACCCCAACGTGAGGGGTAGACCAGCTGGCAGCAACCTT
GGTTCTGCTGATAACTTAGGCCAAATGCTAGAGATTGGGTTGCTGCTACAGAAAGCCCTG
AGCACCCTCCTGATAGACTGCAGCGTTTGCGCTGTCATCATGATCTGTTTTATTTGA

Peptide Sequence

PEP ID

Os01t0863400-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:37360416:37363396:-1 gene:Os01g0863400 transcript:Os01t0863400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical protein. (Os01t0863400-01)
Sequence

MESGANARRRRRLVDRGSDRLAFITGQAQSLPSDPSPDSPLYTVDAASLQRSERQLNEVG
IGDDIFNYITQLQKSESGVQPTSEAHLETHKEKHQGNESDLQKLKTSNVVPEIQPVNEKA
FQRHSEETLRKKNSHDRSASTQPMREMETRSRYVPPNQSNQSDSAGWSVETLKEILNFAP
HEITQAISATEYNRFLASVIIGFLVVLSNWGLDVGGTITKVLVATRPILFLIVTNITIVF
TLLMENKDPNVRGRPAGSNLGSADNLGQMLEIGLLLQKALSTLLIDCSVCAVIMICFI

Transcript Sequence

Transcript ID

Os01t0863400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:37360416:37363396:-1 gene:Os01g0863400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical protein. (Os01t0863400-01)
Sequence

TAGTGGCCTGGGCGTGCGACGCGGAGGGGGCGGGCGATGGAGAGCGGCGCGAACGCACGG
CGGCGGCGGCGGCTGGTGGATAGGGGATCCGATCGCCTCGCCTTCATCACCGGCCAAGCT
CAGAGCCTCCCCTCCGATCCGTCCCCAGATTCACCACTTTATACTGTTGATGCTGCTTCC
CTTCAGCGATCTGAACGTCAGCTAAATGAAGTTGGCATTGGTGATGACATATTCAACTAC
ATAACTCAGTTGCAAAAATCAGAATCTGGTGTTCAACCGACTAGTGAGGCCCACCTGGAA
ACTCATAAAGAGAAACACCAAGGTAATGAAAGTGACCTCCAAAAGCTCAAGACAAGCAAT
GTGGTTCCTGAAATTCAGCCAGTAAATGAAAAGGCATTTCAAAGGCACAGTGAGGAAACC
CTCAGGAAGAAGAACAGTCATGACAGATCGGCAAGTACACAGCCTATGAGGGAAATGGAA
ACAAGATCCAGATATGTGCCTCCAAATCAGTCTAATCAATCTGATAGTGCAGGTTGGTCT
GTGGAAACTCTGAAGGAAATCCTGAATTTCGCACCACATGAGATTACCCAGGCCATATCA
GCTACAGAGTATAACCGATTTTTGGCTTCCGTCATCATTGGTTTTCTGGTGGTTCTTTCA
AATTGGGGGCTGGACGTTGGTGGCACTATCACCAAAGTATTAGTTGCTACAAGGCCAATT
CTATTTCTTATTGTAACGAACATAACCATTGTCTTCACTTTGTTGATGGAGAACAAGGAC
CCCAACGTGAGGGGTAGACCAGCTGGCAGCAACCTTGGTTCTGCTGATAACTTAGGCCAA
ATGCTAGAGATTGGGTTGCTGCTACAGAAAGCCCTGAGCACCCTCCTGATAGACTGCAGC
GTTTGCGCTGTCATCATGATCTGTTTTATTTGATTTTGAGGGGTACCATTGACAGTATTT
TACGGAATTGCTTGTAAGAACGCCAGGTACCATTCTGTC