Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0862600-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:37323898:37324874:1 gene:Os01g0862600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF584 family protein. (Os01t0862600-01)
Sequence

ATGGACCGCTCTCGCCACAAGAACTCGCCTAGTTCCGAGCGCTTCCTCGGCTCCTTCCTC
CCCTCCGCGGCCGCCGGCGACCAGCCCGGATCGGCGGCCTTCGAGCTCGACGAGGACGAC
CTGTTCGCCTCTGGGGCTGGATCCCCCGAGCGGCCGCAGCCGTCTCGCCGCCCTCTCATC
CTCTCCGCAGTCCGCGCCGCAAACCCTAGCCCCCTCCCCCGCCTCCGCCGCCCGCCGGAG
GGCATCCTCGATGCTCTCCCCGAGCGCCGCTCCCCTTTCTCACCGCCTCCATCGTCTTCG
TCGAACTCGTCGACCACCGCCTCCCCAGCGGCGGCGGCGGCTGCTCCTCCACGCCTGATC
CCCACCATCCCCCGCCCGGCGGCGGCTCTGGCACCACATATCCCGCAGTCTGCGCCGGTG
AATGTGCCGGTAGCGCAGTTTAGGCGGTTATCGGTGGAGGCACTGATGGATAAAGCTGAG
GATGACGACGACGACGACGAGGAGATGCTGCCGCCGCACGAGATGGTGGCGCGAGCGCGG
GCGCGGGATTCACCGATGACCACCTTCTCGGTGCTGGAGGGCGCCGGCCGCACGCTCAAG
GGGAGGGACCTCCGCCAGGTACGCAATGCCGTGTGGCGGAAGACAGGATTCCTCGATTGA

Peptide Sequence

PEP ID

Os01t0862600-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:37323898:37324874:1 gene:Os01g0862600 transcript:Os01t0862600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF584 family protein. (Os01t0862600-01)
Sequence

MDRSRHKNSPSSERFLGSFLPSAAAGDQPGSAAFELDEDDLFASGAGSPERPQPSRRPLI
LSAVRAANPSPLPRLRRPPEGILDALPERRSPFSPPPSSSSNSSTTASPAAAAAAPPRLI
PTIPRPAAALAPHIPQSAPVNVPVAQFRRLSVEALMDKAEDDDDDDEEMLPPHEMVARAR
ARDSPMTTFSVLEGAGRTLKGRDLRQVRNAVWRKTGFLD

Transcript Sequence

Transcript ID

Os01t0862600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:37323898:37324874:1 gene:Os01g0862600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF584 family protein. (Os01t0862600-01)
Sequence

GTTGCGCTGGTCACCCCGCTCGCCGCCGGCTCGCCGCCTCCCACCACTGGATCGGCCAAA
TCCGACGCCAGCGCCGCCGCCTAGCCACTCCATGGACCGCTCTCGCCACAAGAACTCGCC
TAGTTCCGAGCGCTTCCTCGGCTCCTTCCTCCCCTCCGCGGCCGCCGGCGACCAGCCCGG
ATCGGCGGCCTTCGAGCTCGACGAGGACGACCTGTTCGCCTCTGGGGCTGGATCCCCCGA
GCGGCCGCAGCCGTCTCGCCGCCCTCTCATCCTCTCCGCAGTCCGCGCCGCAAACCCTAG
CCCCCTCCCCCGCCTCCGCCGCCCGCCGGAGGGCATCCTCGATGCTCTCCCCGAGCGCCG
CTCCCCTTTCTCACCGCCTCCATCGTCTTCGTCGAACTCGTCGACCACCGCCTCCCCAGC
GGCGGCGGCGGCTGCTCCTCCACGCCTGATCCCCACCATCCCCCGCCCGGCGGCGGCTCT
GGCACCACATATCCCGCAGTCTGCGCCGGTGAATGTGCCGGTAGCGCAGTTTAGGCGGTT
ATCGGTGGAGGCACTGATGGATAAAGCTGAGGATGACGACGACGACGACGAGGAGATGCT
GCCGCCGCACGAGATGGTGGCGCGAGCGCGGGCGCGGGATTCACCGATGACCACCTTCTC
GGTGCTGGAGGGCGCCGGCCGCACGCTCAAGGGGAGGGACCTCCGCCAGGTACGCAATGC
CGTGTGGCGGAAGACAGGATTCCTCGATTGATCCGTGCCTTCTGCATTCAGCTGTAGCTT
AAGTTAGATTTGAGTGATTGGTTATGCACTATGCATGTTTGAATTTGTCTGTGTACAACA
TGGATGATCGGGTGTTAATTTTGGTTGCACCTGTAAAATATGTCTGTCATATTATCAATC
ATTATTACTTGTAAACCCTTGATTGGAGCTGTCAATTGTTCAGCATTGAACTATTGGATA
AGGTGAATTGTGACCTC