Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0862300-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:37316226:37320481:-1 gene:Os01g0862300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Sorting nexin 1. (Os01t0862300-01);Similar to Sorting nexin 1. (Os01t0862300-02)
Sequence	ATGTCGCAGGAGAGGAGCCAGTCGCAGAGCCCCCGGTCGCCGGCGTCGGCGGCTGGGGTG CCGTTCCTGTCGATCTCCGTCACAGATCCTGTGAAGATGGGTACCGGAGTCCAGGCCTAC ATCTCCTATCGCGTCATCACCAAGACCAACCTGCCTGACTTTGAGGGGCAAGAGAAAATT GTTATCCGGCGCTATAGTGACTTTGAGTGGTTGCATGATCGTCTTGCTGAGAAGTACAAA GGCATTTTTATACCTCCCCTTCCAGAGAAGAATGCTGTTGAAAAATTCCGGTTTAGCAAA GAGTTCATTGAATTACGGCGTCAAGCCCTGGATCTATTTGTCAATAGAATAGCTTCACAT CCTGAACTCAAGCAAAGTGGAGATTTGAAGATATTTTTGCAGGCAGATGAAGAGAAAATG GATAGAGAAAGGTCTTATGAAACTGGTATATTCAAGAAGCCTTCTGATTTCTTACAGATG TTTAAGGATGTACAATCAAAAGTCAGTGATGTTGTTCTGGGAAAAGAAAAGCCTGTGGAG GAATCTAGTCCTGAATATGAAAAGCTTAAAAATTACATATTTGAGCTAGAAAACCATTTA GCAGAGGCACAGAAACAAGCATTCCGTCTTGTGAAAAGACACCGAGAACTTGGGCAATCT TTGGCGGACTTTGGTAAGGCTATTAAGCTTTTAGGTGCTTGCGAAGGGGACTCCTTGGAA AAAGTTTTTTCAGAAGTTGGATCAAAGTCAGAGATGTTATCAGTAAAGCTGCAAAGAGAG GCAGACAACCTTCTCTTTAACTTTGAAGAGCCTTTGAAAGATTATGTACGTGCTGTGCAG TCAATAAAAGCAACTATGGTGGATCGAGCCAATGCTTTCAGGCAGCATCATGATTTATTT CAGCAGAAGGAATATAAAGGGGTTAATCTCGAAAAATTGAAGTTCGTGAACCCTGATAAA TTTTCTGAACTAGAAGCTGAGGTCCGAGAGTTGACAGCAGACAGTGAGGAGGCTACAAAG AGGTTTGAGCACATAGTTGCAGTAATGAATGAAGAGCTTGCACGTTTCCAAGAGCAGAAA ACAGCTGATATTGGATTCGCATTCCATGAATTTGCCAAAGGCCAAGCAAAGTTAGCTAAA GATATTGCTGATGCATGGCGAGGCGTCCTCCCAAAGCTCGAAGCCTGTTCCACTTCATAA

Peptide Sequence

PEP ID	Os01t0862300-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:37316226:37320481:-1 gene:Os01g0862300 transcript:Os01t0862300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Sorting nexin 1. (Os01t0862300-01);Similar to Sorting nexin 1. (Os01t0862300-02)
Sequence	MSQERSQSQSPRSPASAAGVPFLSISVTDPVKMGTGVQAYISYRVITKTNLPDFEGQEKI VIRRYSDFEWLHDRLAEKYKGIFIPPLPEKNAVEKFRFSKEFIELRRQALDLFVNRIASH PELKQSGDLKIFLQADEEKMDRERSYETGIFKKPSDFLQMFKDVQSKVSDVVLGKEKPVE ESSPEYEKLKNYIFELENHLAEAQKQAFRLVKRHRELGQSLADFGKAIKLLGACEGDSLE KVFSEVGSKSEMLSVKLQREADNLLFNFEEPLKDYVRAVQSIKATMVDRANAFRQHHDLF QQKEYKGVNLEKLKFVNPDKFSELEAEVRELTADSEEATKRFEHIVAVMNEELARFQEQK TADIGFAFHEFAKGQAKLAKDIADAWRGVLPKLEACSTS

Transcript Sequence

Transcript ID	Os01t0862300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:37316226:37320481:-1 gene:Os01g0862300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Sorting nexin 1. (Os01t0862300-01);Similar to Sorting nexin 1. (Os01t0862300-02)
Sequence	GAGGCCCCCGTCCCCTCCTCGTCGACTCCCGTCTCGTCTCCTCGCGAGTTCACCTGCCGT CTGCGCCGATCTCCGATTCTCTATCCGGCGAGCAGGGGGACGCCGCCGTCCTGCTGTTTC CGCCGCATCCTGGTTTGGGAGGTTCAACTGAGCCCCCATGTCGCAGGAGAGGAGCCAGTC GCAGAGCCCCCGGTCGCCGGCGTCGGCGGCTGGGGTGCCGTTCCTGTCGATCTCCGTCAC AGATCCTGTGAAGATGGGTACCGGAGTCCAGGCCTACATCTCCTATCGCGTCATCACCAA GACCAACCTGCCTGACTTTGAGGGGCAAGAGAAAATTGTTATCCGGCGCTATAGTGACTT TGAGTGGTTGCATGATCGTCTTGCTGAGAAGTACAAAGGCATTTTTATACCTCCCCTTCC AGAGAAGAATGCTGTTGAAAAATTCCGGTTTAGCAAAGAGTTCATTGAATTACGGCGTCA AGCCCTGGATCTATTTGTCAATAGAATAGCTTCACATCCTGAACTCAAGCAAAGTGGAGA TTTGAAGATATTTTTGCAGGCAGATGAAGAGAAAATGGATAGAGAAAGGTCTTATGAAAC TGGTATATTCAAGAAGCCTTCTGATTTCTTACAGATGTTTAAGGATGTACAATCAAAAGT CAGTGATGTTGTTCTGGGAAAAGAAAAGCCTGTGGAGGAATCTAGTCCTGAATATGAAAA GCTTAAAAATTACATATTTGAGCTAGAAAACCATTTAGCAGAGGCACAGAAACAAGCATT CCGTCTTGTGAAAAGACACCGAGAACTTGGGCAATCTTTGGCGGACTTTGGTAAGGCTAT TAAGCTTTTAGGTGCTTGCGAAGGGGACTCCTTGGAAAAAGTTTTTTCAGAAGTTGGATC AAAGTCAGAGATGTTATCAGTAAAGCTGCAAAGAGAGGCAGACAACCTTCTCTTTAACTT TGAAGAGCCTTTGAAAGATTATGTACGTGCTGTGCAGTCAATAAAAGCAACTATGGTGGA TCGAGCCAATGCTTTCAGGCAGCATCATGATTTATTTCAGCAGAAGGAATATAAAGGGGT TAATCTCGAAAAATTGAAGTTCGTGAACCCTGATAAATTTTCTGAACTAGAAGCTGAGGT CCGAGAGTTGACAGCAGACAGTGAGGAGGCTACAAAGAGGTTTGAGCACATAGTTGCAGT AATGAATGAAGAGCTTGCACGTTTCCAAGAGCAGAAAACAGCTGATATTGGATTCGCATT CCATGAATTTGCCAAAGGCCAAGCAAAGTTAGCTAAAGATATTGCTGATGCATGGCGAGG CGTCCTCCCAAAGCTCGAAGCCTGTTCCACTTCATAAATGCTCCGTGTTAGCTTATGTTG TTTGGTTTAGTGGTTGACAATCGGCGAGTTTTAGGCTGTTTTTTCCCCAGGCCACCTTGA CACCGCGTCCTGTATACTTCAACTGACTCTGAAAAAGGGCTAGTTTTTAGATACAATTGA CATCATTTCCTGCCTGCTCTGTGTGTATCCTTCTTTTTACGACCAATCAATATTGCTACT GGAATATCTCAAGAATGATGCAGTAAAGGGAAAATAAACTTTAATTTGG