Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0862200-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:37315317:37316250:1 gene:Os01g0862200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0862200-01);Conserved hypothetical protein. (Os01t0862200-02)
Sequence

ATGGCGGTGGTGAGGCAGCTGCTGGTCCACAGGCTCTCCTGCAGTGGCCTGCCTGCTTCC
CGCTGCAAGACCAGTTGCTGGAGCAGCGGCGAGAGGCTCCCTGGCTTGAAGTCAAGGGTA
AGGTTGTTGGCCGTGGCCATCAAGCCACCGCGCGCCGCCGCGGGGAAGGACGAGATTGTG
CGGGCGGACGACGACGACGACGGCGTCAGCCTCGGCACGGTGAAGCTGCCCGCCAACATC
GACATAGCTCGGTTCGAGACGCTGCTCTTCCAGTGGGGGAACAGCCTCTGCCAAGGCGCC
ACCCTGCCGCTCCCGGTGCCCCTGAGGGTGGACAAGGTGGAGGGCGGTGTCCGGCTAGGA
TTCATGGCGGTGGACGACGGCGTGACGCAGGTGCTGGTCTACATCGACTGCCTGGTGTCG
CCGGCGACGGCCGCCTCTGGGCCGGTATTCCGAGCGATCAGGAACGGTCCTATGAAGGAC
CAGGAGCCACCTGGGGAGCCCAGGATCATGAGAAGCCTACTCGAGGCGCTCCAAAAATGT
ATCCAGTATGCACAAGTTTGA

Peptide Sequence

PEP ID

Os01t0862200-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:37315317:37316250:1 gene:Os01g0862200 transcript:Os01t0862200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0862200-01);Conserved hypothetical protein. (Os01t0862200-02)
Sequence

MAVVRQLLVHRLSCSGLPASRCKTSCWSSGERLPGLKSRVRLLAVAIKPPRAAAGKDEIV
RADDDDDGVSLGTVKLPANIDIARFETLLFQWGNSLCQGATLPLPVPLRVDKVEGGVRLG
FMAVDDGVTQVLVYIDCLVSPATAASGPVFRAIRNGPMKDQEPPGEPRIMRSLLEALQKC
IQYAQV

Transcript Sequence

Transcript ID

Os01t0862200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:37315317:37316250:1 gene:Os01g0862200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0862200-01);Conserved hypothetical protein. (Os01t0862200-02)
Sequence

AGCTTAGCTCTGTGAACTGTGATTCTACTCCACTTCGAAGTCCAAAGCCTCTGAGGCAGA
ACGCCGCCATGGCGGTGGTGAGGCAGCTGCTGGTCCACAGGCTCTCCTGCAGTGGCCTGC
CTGCTTCCCGCTGCAAGACCAGTTGCTGGAGCAGCGGCGAGAGGCTCCCTGGCTTGAAGT
CAAGGGTAAGGTTGTTGGCCGTGGCCATCAAGCCACCGCGCGCCGCCGCGGGGAAGGACG
AGATTGTGCGGGCGGACGACGACGACGACGGCGTCAGCCTCGGCACGGTGAAGCTGCCCG
CCAACATCGACATAGCTCGGTTCGAGACGCTGCTCTTCCAGTGGGGGAACAGCCTCTGCC
AAGGCGCCACCCTGCCGCTCCCGGTGCCCCTGAGGGTGGACAAGGTGGAGGGCGGTGTCC
GGCTAGGATTCATGGCGGTGGACGACGGCGTGACGCAGGTGCTGGTCTACATCGACTGCC
TGGTGTCGCCGGCGACGGCCGCCTCTGGGCCGGTATTCCGAGCGATCAGGAACGGTCCTA
TGAAGGACCAGGAGCCACCTGGGGAGCCCAGGATCATGAGAAGCCTACTCGAGGCGCTCC
AAAAATGTATCCAGTATGCACAAGTTTGAGTGTCCAAGAGAGGCGATGCAAGCCCATTAT
CTGAAGAAACTTGGAATTCTAAATTGGAGATGTAAATTCCCTGAGAGAAATACATGATAC
AGTACCAAATTAAAGTTTATTTTCCCTTT