Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0859600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:37190435:37197744:-1 gene:Os01g0859600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 49 description:Cyclin-like F-box domain containing protein. (Os01t0859600-01)
Sequence	ATGGAGCACCTTCCTGTTGAAGTCATTGGCAACATTCTTGCACATCTTAGCGCTGCACGT GATGTCATGGTTGCCTCTGGGGTGTGCCGGAAGTGGCGGACGGCATGCAGGAAGCACCTC CATTCATTATCGTTCAATTCCGATGACTTCCCTCGGGACATGACTACACGCCAGCTGGAG ATTGTCATCACACAGACTATATTTCAGACAATGGGGCTGCAGTGCCTCTCTATTCACATA GATCGTACCCATGAGTTCTCGGCAGCACCTGTGATTGCATGGCTCATGTATACCAGGGAA ACACTCCGGAGCTTGTCTTACAATGTTCGGACAAACCCTAACGTGAACATCCTGGAGAAA TGTGGGAGGCAGAAATTGGAGGTGTTGGATTTAGACCATAACACAATCACTGGTGTTGAA CCAAGTTATCAGAGATTCACCTGTCTGAAATCCCTTTCTTTAAGGCATGTGAGCATTTCA GCCTTGGATTTGAGCCTTTTAGTGGCTGCTTGCCCAAAGATAGAGTCACTGGCACTTGAT TTCCTTGAGGTTGTCACTTCAGATCCACAGTCTACAATGGAGCTGACTAGCCATACCTTG AAGAGCCTATTTGCAAAATCTGTTGGTGTGGACAAGATCATACTTGATACAGATAATCTG GAAGTTCTAAACCTAAATGCTTTGAACCTTGATTTGTTTGAGCTCATTGGGAAGGGTACT CTAAAGCATCTCAAGATTGACGATGTTAGTGTTACTCATATGGATATTGGGGAGAGCACA GATCATCTGGAGGTAGTGGATGTGAGTAACTTTACTATAGTCCGGCCAAAGCTGTACAGT ATGATATCCAGAGCATCTAACTTGCGGATGCTACGATTTTGGGGTGTTGTGTTTGATGAT GAGGATGAGATTGTGGACTCAGAAACCATTGCTGTTTCATTTCCTCTTCTAAGGCATCTT TCATTGAGTTATGAGTTACGAGATGGGCTACTTCATTATAGCCTGCAAGGATCGTCACCA CTGGATAATGTTTCAGTCTTGGAACTTGGTTGGACAGTTATAAGTGAGCATTTTGGACCC TGGGTTTTTGGAATGATCGAGAGGTGCCCAAATCTCAAGAAACTTGTCATTCATGGTGTT CTTTCTGAGGCAAAAACACGCGAAGAGCGCCAGATGCTAGCAAGCTTTACTTCATTTATA GTCTGCCTCATGAGGAAGTATGTGCATGTTGATGTACAATTTGAGTACGAGTGA

Peptide Sequence

PEP ID	Os01t0859600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:37190435:37197744:-1 gene:Os01g0859600 transcript:Os01t0859600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 49 description:Cyclin-like F-box domain containing protein. (Os01t0859600-01)
Sequence	MEHLPVEVIGNILAHLSAARDVMVASGVCRKWRTACRKHLHSLSFNSDDFPRDMTTRQLE IVITQTIFQTMGLQCLSIHIDRTHEFSAAPVIAWLMYTRETLRSLSYNVRTNPNVNILEK CGRQKLEVLDLDHNTITGVEPSYQRFTCLKSLSLRHVSISALDLSLLVAACPKIESLALD FLEVVTSDPQSTMELTSHTLKSLFAKSVGVDKIILDTDNLEVLNLNALNLDLFELIGKGT LKHLKIDDVSVTHMDIGESTDHLEVVDVSNFTIVRPKLYSMISRASNLRMLRFWGVVFDD EDEIVDSETIAVSFPLLRHLSLSYELRDGLLHYSLQGSSPLDNVSVLELGWTVISEHFGP WVFGMIERCPNLKKLVIHGVLSEAKTREERQMLASFTSFIVCLMRKYVHVDVQFEYE

Transcript Sequence

Transcript ID	Os01t0859600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:37190435:37197744:-1 gene:Os01g0859600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 49 description:Cyclin-like F-box domain containing protein. (Os01t0859600-01)
Sequence	GTTCTTCCTCCTCCTCCCTCGCCGTCCTCACAATTTGTCTCTTCCCCTAATTTCTCCCCC CAATTTCGTCCCTTCTCGGGTCTCGAATTTGTCGCCCTTCTTCCTCGCGATCTGTCGCGC TTCATCGCCATCGGCGACCTCGCGCGCGCGCCGCCGGCGCTGGGGGGGCGCCGGAAGCCT TTCTCTCGTCGAGAGGCGTCGCGGCCCCCTTCGCCCCCCCCCCCCCTCTCCCGACTCCTC CGCGGCGTGCTGGGCTAGCGCACGTGCAGCGTAGATCCATCCGGGTTTGGATTGATTTCT TATTTTTAAAAAAATCGGTAAGGAACCCTAGCTTTGCTTACCTCGATGGTTCATTTCGAT CTAAATCTTTATTTATGCCCGTCGTTCAGTTAGTGGTGGAATTATTTGCTGCGCGTTGCG CTACTAGCCTAATAGACTTATCCGTGGCTGGTGATTCCATGATTAGGTACTTATTCTTCT TCAGAGCTCAAGATCAACATGAGTTGAACCAAATAATTTTGGTACTCTAGGTGCGGGCGC AGTTACCTTTTTTTTCCAGAAATCTATGTGGTTCAACTGAATTTTCCATGCCCTATGTTA AGTCTGCCGCTGCTCCTCTGGATAGGAAAAGTTTCCAATTAGGTTGTACCTGACCAGGTT GGGTAATTTTTCGGCGGCCAATATGGAGCACCTTCCTGTTGAAGTCATTGGCAACATTCT TGCACATCTTAGCGCTGCACGTGATGTCATGGTTGCCTCTGGGGTGTGCCGGAAGTGGCG GACGGCATGCAGGAAGCACCTCCATTCATTATCGTTCAATTCCGATGACTTCCCTCGGGA CATGACTACACGCCAGCTGGAGATTGTCATCACACAGACTATATTTCAGACAATGGGGCT GCAGTGCCTCTCTATTCACATAGATCGTACCCATGAGTTCTCGGCAGCACCTGTGATTGC ATGGCTCATGTATACCAGGGAAACACTCCGGAGCTTGTCTTACAATGTTCGGACAAACCC TAACGTGAACATCCTGGAGAAATGTGGGAGGCAGAAATTGGAGGTGTTGGATTTAGACCA TAACACAATCACTGGTGTTGAACCAAGTTATCAGAGATTCACCTGTCTGAAATCCCTTTC TTTAAGGCATGTGAGCATTTCAGCCTTGGATTTGAGCCTTTTAGTGGCTGCTTGCCCAAA GATAGAGTCACTGGCACTTGATTTCCTTGAGGTTGTCACTTCAGATCCACAGTCTACAAT GGAGCTGACTAGCCATACCTTGAAGAGCCTATTTGCAAAATCTGTTGGTGTGGACAAGAT CATACTTGATACAGATAATCTGGAAGTTCTAAACCTAAATGCTTTGAACCTTGATTTGTT TGAGCTCATTGGGAAGGGTACTCTAAAGCATCTCAAGATTGACGATGTTAGTGTTACTCA TATGGATATTGGGGAGAGCACAGATCATCTGGAGGTAGTGGATGTGAGTAACTTTACTAT AGTCCGGCCAAAGCTGTACAGTATGATATCCAGAGCATCTAACTTGCGGATGCTACGATT TTGGGGTGTTGTGTTTGATGATGAGGATGAGATTGTGGACTCAGAAACCATTGCTGTTTC ATTTCCTCTTCTAAGGCATCTTTCATTGAGTTATGAGTTACGAGATGGGCTACTTCATTA TAGCCTGCAAGGATCGTCACCACTGGATAATGTTTCAGTCTTGGAACTTGGTTGGACAGT TATAAGTGAGCATTTTGGACCCTGGGTTTTTGGAATGATCGAGAGGTGCCCAAATCTCAA GAAACTTGTCATTCATGGTGTTCTTTCTGAGGCAAAAACACGCGAAGAGCGCCAGATGCT AGCAAGCTTTACTTCATTTATAGTCTGCCTCATGAGGAAGTATGTGCATGTTGATGTACA ATTTGAGTACGAGTGATCATTGTCCAAGTTGGGTGGGCATTCTTGCCCTAGCTCATTCGA GACATACCATCAGATTTGCTTCTCATCCAACTTCACGAAGGCCTGTGGTTTGTTACTGTC AGCTGCATGTACTTGATCAAGAAAGTTTGAGTTGACATGTCCACAGAATAAAAAGCGCAT GCATTTGCCAATACATTATAGCACAAGTCGCGCACCCTTCTCTGGAAACCATCGTCCTCT CTGTTAGTGAAACACCTCCAACTGAAATGGAATGCTTAAGGTGACATTTATTTGGCACAT GCCCATGAATATAATGCCCTCATCTTTTGGTCTGTTCATGAGAGAAATTTTGGGTGGGAA TTCTCTTTACATACTGTAAGTGTGAATGGAAGATTTATAAATTGTAAGTTGACTTCATGC CCACAGAAAACGTGAATTCTCTTAGGAAAATGGTTATTCCCCTGAAACTTTACGCCTTGA AATTCCTCGCGCCGAGTGATTCTATTATATTGATATTTGCTCTTAGCATGG