Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0859400-03
CDS Infomation	cds chromosome:IRGSP-1.0:1:37177490:37184746:1 gene:Os01g0859400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 16 description:Protein-tyrosine phosphatase, dual specificity domain containing protein. (Os01t0859400-01);Protein-tyrosine phosphatase, dual specificity domain containing protein. (Os01t0859400-02);Protein-tyrosine phosphatase, dual specificity domain containing protein. (Os01t0859400-03)
Sequence	ATGGGTTGGGGGATATCCCGGTTGATTGGACTGAAAGCAGCTGTGTTCCTCTCTGTGGCT TATTTCTTCCATAGATTGGACATGACACTGCTTTCTTTTCCCCTCATATATGCCTCTGTG ATTGCGATGCTTGTTTCTATTGCTTCACATCCATCAATTGACCTTCCTTTGCTCCTTGGC AAGGGGTCGAATGGAAGCTTTCCTGTGTGGTCATGGATCATGTTCTCACCATTTCTTCTT TTCATCCATCTGTTTGTTCTGTTACGAAGATTTGTGAAAAATGAGCCCTTGTACACTGAG ATTGCTGATGGAGTGTATGTTGGAGGGTGGCCCTCTTCAGTTGAGCGCCTGCCCCCTGGT GAACCTGCAGTCATAGACTGTACGTGCGAGCTCCCAAGAAGCTCTACTATATCCGAGAAT TCATATTTGTGTGTTGCCACCTGGGATACAAGGGCTCCTCAACCATCGCAGATTGAGTCT GCCGTGAGATGGGCACTGAGAAAGCGTTCGCAGAACAAAGCTGTATATGTCCACTGTGCC TATGGCCATGGAAGAAGCGTCTGCGTGATGTGTGCACTTCTTGTTGCATTGGGATTAGCT GAGGATTGGAAAGCTGCTGAGCAAATGATTCGTGAGAAGCGACCTTCTATTAGCATGAAT TCTCTTCATCGTAAAAGTTTAGAGGAATGGGCAAAACACTTGCTCACTCCCTCAAAAAGA AGTGGGGAATCAGATGTGAGTTATGCGATTCTTTCGGATCATACCCGAAAAAGGCATTGA

Peptide Sequence

PEP ID	Os01t0859400-03
PEP Infomation	pep chromosome:IRGSP-1.0:1:37177490:37184746:1 gene:Os01g0859400 transcript:Os01t0859400-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 16 description:Protein-tyrosine phosphatase, dual specificity domain containing protein. (Os01t0859400-01);Protein-tyrosine phosphatase, dual specificity domain containing protein. (Os01t0859400-02);Protein-tyrosine phosphatase, dual specificity domain containing protein. (Os01t0859400-03)
Sequence	MGWGISRLIGLKAAVFLSVAYFFHRLDMTLLSFPLIYASVIAMLVSIASHPSIDLPLLLG KGSNGSFPVWSWIMFSPFLLFIHLFVLLRRFVKNEPLYTEIADGVYVGGWPSSVERLPPG EPAVIDCTCELPRSSTISENSYLCVATWDTRAPQPSQIESAVRWALRKRSQNKAVYVHCA YGHGRSVCVMCALLVALGLAEDWKAAEQMIREKRPSISMNSLHRKSLEEWAKHLLTPSKR SGESDVSYAILSDHTRKRH

Transcript Sequence

Transcript ID	Os01t0859400-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:37177490:37184746:1 gene:Os01g0859400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 16 description:Protein-tyrosine phosphatase, dual specificity domain containing protein. (Os01t0859400-01);Protein-tyrosine phosphatase, dual specificity domain containing protein. (Os01t0859400-02);Protein-tyrosine phosphatase, dual specificity domain containing protein. (Os01t0859400-03)
Sequence	TCCTTGCGCCATCTCGCGGCTGAACCGGGGAGGGGCGCCGATCTCTATCCGACGAGCAGA CCAAGGGAGGGGAGGGGATCCTGGGTTCACCCAAATATTTGAAGACCCAAGCGTTTGGTG ATTGGCAAAGATGGGTTGGGGGATATCCCGGTTGATTGGACTGAAAGCAGCTGTGTTCCT CTCTGTGGCTTATTTCTTCCATAGATTGGACATGACACTGCTTTCTTTTCCCCTCATATA TGCCTCTGTGATTGCGATGCTTGTTTCTATTGCTTCACATCCATCAATTGACCTTCCTTT GCTCCTTGGCAAGGGGTCGAATGGAAGCTTTCCTGTGTGGTCATGGATCATGTTCTCACC ATTTCTTCTTTTCATCCATCTGTTTGTTCTGTTACGAAGATTTGTGAAAAATGAGCCCTT GTACACTGAGATTGCTGATGGAGTGTATGTTGGAGGGTGGCCCTCTTCAGTTGAGCGCCT GCCCCCTGGTGAACCTGCAGTCATAGACTGTACGTGCGAGCTCCCAAGAAGCTCTACTAT ATCCGAGAATTCATATTTGTGTGTTGCCACCTGGGATACAAGGGCTCCTCAACCATCGCA GATTGAGTCTGCCGTGAGATGGGCACTGAGAAAGCGTTCGCAGAACAAAGCTGTATATGT CCACTGTGCCTATGGCCATGGAAGAAGCGTCTGCGTGATGTGTGCACTTCTTGTTGCATT GGGATTAGCTGAGGATTGGAAAGCTGCTGAGCAAATGATTCGTGAGAAGCGACCTTCTAT TAGCATGAATTCTCTTCATCGTAAAAGTTTAGAGGAATGGGCAAAACACTTGCTCACTCC CTCAAAAAGAAGTGGGGAATCAGATGTGAGTTATGCGATTCTTTCGGATCATACCCGAAA AAGGCATTGATCTCGCAAGAAAACTAACTTGCTCAGTGGCTGTGATAATTGAGATGAAGT TTAAATGCTCTGGCATTATCTACTGTTATCCTAGTCATGTCCAAGGCATTTCATTCTCTA AGTTAATTGTTTGGGAGTATGTTGTAAAACTTCTACTACTGTGGCTTACAACGCCAGCTC TTTTAGGCGCTCTGTTGGCTGCGTTTGTTGCCCTGACTTGGGATTAGGGTTCACAGATGG AATTTCGCGAAAACCAATCGGATTTCTTGAAACTGCTAGGTCTCGGTTTATGAAAACCGG ACCAGTTTTGTACCGCATTGACCGAAAGTCATCGGTTTTTACCGGTTTTTGGTCGGATTT CGGTAAACCGGTGAGGAGCGGTTTTTACTTCGAAATTGAAAAGTAAAACCCTTGTTGGGA ACCTTTCCTTCCCCTTCGGCACAAAAAATAGAGCAACTCATTAGCGCTTGAGCAATTAAG TATTAGCTCAAACTAACTTAAAAAATGGATTTAATATGATTTTTAAAACAACTTTGCTAT AGAAGAGTTTTGCAAACACCATTTAGCAATTTGAAAAACGTGTGTGTGGAAAATTGAGAG GTATAAGTTGGGAAAGCTCGTTGCCGAACGCAGCCTAAGAACAAGTTTTATAATAGAGCC AACTTTAAGTTTATAGCTTATATTAGAATTAACATGTATAGTGATGAGCTATAAGGTTAT CTCTCTATTTTTCTCCTCTCTCTATCTCTCTCATGCATATGCATTTAATGTATTTATCTT GAAGTATGTGAATAGCTATCTCTTGCATAATAAGAGCCAATCTTTTTCATTTTCTAAATT CTCTTTCCTCCACATAAGTTTATTTGCCTTATAGTGTACTATTAAACTTGCTCTAATGAT CTTCCCTGTCATTGAATGCTTGCCAGAGACGTGGTATTGTCGGATCTCTCTTTCTGAAAA AGAGGGGCCTCTGCTAGCCTGCTAGATTCTCATTTATAGCGAAATGTGGTATGTTTTTCA TTTTTGGTAGTTTGCATCTATCTCTCTGTTAGGTTCTTTTCATCTGGCCTGAAATAAATG CTCAACTATTCACCACTTTGCTGTACCCCTGTATTCTGTGGACATTTCATACTTGACTCA TGAAAATTTTCATGTTTGTATCTCATGTTTTGTGTGTAATGATCGTGGCTAAGCTGTAGT GTACTCATCCCATCATGCTATCTTGTGTGGAGTATGCTCTTCTGGCCTTTTCATAATTTT TGCCATTTTTCTGCCCTTGTCTCAAGCACCAGTTTGCCAGTTGATGGATCAAAATCAAGA GCTGCACTATTGGAACAATCTACATCCTACGGAAAGTCGCATGCCTGGCAAGAAATATCT CAAATGGTCTTGGTAGATGTCACATGACAAAAGGGTTGCTTTTCACCTTTCTAGTTCTTT GATCTTCTTATCAGTTGAATTCACTGATCTGCCCTTTCTTCCATTTATTTGGTCTTTGAA AAAAGGGACTTCCATCTATTTGTTTCTTGTTTTACTAATAAGCATTGTGACATTCCTTGT GACTTGCGTTGTTTTTCTGTGTCCTGTTTTTTACATGTATTTCAGATGTACCTCTTAGTG ACAACTATTTTGTCTGTCAATTGATGGTATTAGATTTGTCCTCCGTGATTTCAGAGTTCA GACAGTTATCATCTCTCTTCCATCAGTGCCATTAGTGCCAGGTTGGGAAAGCCTTATTTG CTGGCACGTTTTCTTTTTTCTTTTTTTTTTTTTGGTAGTGTTGATCTGCGTCATGTTCTG TTGTTATCTGTAGATGTCTATTTTCAAAGTAAGCTTGGGAACATCCTACCTTTAAAAAAA ATGGCTTGTTCAGCAGAAATATTAGAGGTTGTTTTATGCATCGTCTTTTGGGAGGATTTT GTCTGCTCAAGTCATGAGCAGCCACGCATCTCCTGCCTTTGCATTGCTCTGGTCTGCAAC AATTATTTCTGTGCTAACTCTTCAGCCTGTTCAAGAGCCATTGGAAGTTTGGAACAAGTG AGCCAGTGACCAGCATTGCATTGCACCTCAACAAATTTTTGCCTCTTCCTTTTCCTAGTG ATGTTGCTTTCTCAATACTTTAATAATAGAACATTACAACCCCTCTCCCTCTCCCACCCT CTCTTTCTAACATCACTTTTGGCCGGAGTTTACATCCTCCAGGAGAAGCTCTCAAAATCC TGAGTACTGATTCTGCTGAGGCTGATTATGCATCGGTTGCAGCTCGGTTCCTGTGGGACT GACGCTCTCGGTGCCAATGAAGTTCCTGTTGCAAGAGAAAAAAGAGTCAATGCCAGCCAT GTTCATCTGTTTCTCCGACTAGAAGAGATATTGCACGAATATCTGTCCTCGATATAACAC ATCAAATGATCAAATCAACCATCCACCCTATGAACACTAGTATAATTCATCGCTTATCTA ATGACTCGCTGGAGATAAGCAGTTCTGAGTCTTACTCGCGAGGACGTGAAGACCAGAGGT TGCTGAGAGCACGGAGGCGGCGGTAATACTCCCCAATGGAGAGGAAACACCGAGCCGCCT GCCGGGTTGTTAGAATCCGCCGCAGCTGATGCAACGTTTGTTGCCTCAGATTGTCAGCCT GCACATTTGCCAGGAATGAAGAAGAAAAAAAAAGTAAGTTCTGCATGAATGATCAACGGA ACGGGATGACAATGCTAAGCTGTTGACGTACCTGCTGGTAGAAGCTTTCGAGGCTGGCGA GCTTGTCCAGGGCGATGGCCATGAGGCTCATGTAGTTGGGCACGCCGGGGCCGTCGTTGA GCGTGCCGGCGGCGACGGTGTCGGCGAGCGACTGGTGCAGCTGCTGCAGCCCCTGCGCGA GCGCCTCCTCCGCCTGCTCCGACGACTGCTGCAGGCTGTAGATCCCCAGCATCTGCTGCT CCGTCAGCGGGTCCAGCTGCTGTATCAGTATCTGCATATATAGTCGACGATGAGTATATA TTCGTGACACGCCCATGCAGGCAACGCCGGCGATGCAGGCGGCGGCGGCGGCGGAGGCGA ACCTTGAGAAGGTCGGAGGGGCGGAAGCCGCCCATCCAGAGGAAGCAGCGCTCGGCGGGG GTAGCCCACGTGCCGGTGAGGAGGTGGAAGACGTCGGAGCGCGCGAGCGCCGCCTTGAGC TGGAACAGCTCGTCGTAGTGCTGCATGCACTCCTCCACGATGAGGCCAAGGTTGGTGTCC AGCAGGTGCGCCTGCAGGCCGCCACGGAGGTCGGTCAGCCGCTTGCTGTCGTCGTCCAGC CAGCGCGCGTACTCCATGTCGAACATGGCCGCGCCTGCAAACGATTTTACTGCGCCGTGG TGAGAACTCCGAGGCACACCCTCGTCTGCAAGCTGCAGGCTTGCAGGCTGCAGCTGCTGC TGCTCAACGCATCGAAAAAAGAAACGGACGGCTCTGATTACCAGAACTCATGTCGCCTGC TGCTCTGCACCCCCCAAGAAACAGGCCCTGACGATCAATCAAGCAATGCGGGTACCATAT TAAATTCCTGCTAATTTATTTCATTTCTGGATAGTAGAAAAAAAATAGTACTAGTACTAG CATCAGAAATTC