Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0858350-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:37097377:37099130:-1 gene:Os01g0858350 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cytochrome P450. (Os01t0858350-01)
Sequence

ATGGGTGTCGTCGAGGCAGAGGCGTTGCATGGGGCGGTGGAGGCCCTGGCTGGGTCGCTG
CAGCCGCACGTGGCCACCGCCTTCTTCGTGTTCTCGGCGTGCACGGTGGCCCTCGCCGCG
CTCCTTGCCGTGGTGCGCCTGCGCCCGCCGTGGTGGTGCGACTGCACCGTGTGCGAGGCC
TTCCTGACGGCGTCGTGGGCGGGAGAGTTCGACAACCTCTGCGACTGGTACGCCCACCTG
CTGCGCACCTCGCCGGCGCAGACCGTGCACGTGCACGTCCTCCGCAACGTGCTCACCGCC
AACCCGGTCACCGTCGACCACGTGCTCCGCGCCCGCTTCGACAACTATCCCAAGGGCGCT
CCCTTCTCCGCCATCCTCGCCGACTTCCTCGGCCGCGGGATATTTAACGTCGACGGTGAC
GCGTGGCTCTTCCAGCGCAAGCTCGCCGCTGCCGAGCTCGCCTCTCCGGCGCTCCGCGCC
TTCGCGGCGCGTGTCGTGGCCTCCGAGCTGAGGTGCCGCCTCATCCCTCTGCTCCACTCT
GCTTCACGTGAGGGCAACGGCAAGGTGCTCGACCTGCAAGACATGTTCCGCCGCTTCGCC
TTCGACAGCATATGCAAGATCTCGTTTGGCCTCGACCCTGGCTGCCTCGAGCTGTCGATG
CCTGTATCGACGCTCGTGGAAGCGTTCGACACGGCGTCGACACTCTCCGCGCGGCGGGCG
ACGGTGCCCATGCAGATAATCTGGAGGCTGAAGCGGTTCTTGAACGTCGGGGACGAAAGG
AAGCTCCGGGACGCGGTCCGTTTGGTCGACGCGCTCGCGGCGGAGGTCATCCGACAACGG
CGGAAGCTTGGCGGCGCTGCCACCGGCAGCGACCTCCTTTCACGCTTCATGGGCTCCATC
GACGACGACAAGTACCTCCGCGACATCGTCGTCAGCTTCATGCTCGCCGGCCGCGACACC
ATCGCCTCGGCGCTCACCGCCTTCTTTCTGCTCCTCTCCGATCACCCAGAGGTCGCCACC
GCCATCCGAGACGAGGTCGCCCGCGTCACGGGCGACGGCAACCGAACCATGGCCGCCACA
TTCGACAAGCTCAAGGACATGCACTATGTGCACGCCGCGATGTACGAGAGCATGCGCCTG
TTCCCGCCAGTGCAGTTCGATTCCAAGTTTGCCGCCGGCGACGATACGCTGCCGGACGGC
ACGGTCGTCGCGAAGGGCACCCGGGTGACCTACCACGCCTACGCCATGGGCCGGATGGAG
TCCGTATGGGGCCCCGACTGCGCCGAGTTCCGGCCGGAGCGATGGCTCCGGGACGGCCGG
TTCGTCCCGGAGAGCCCGTACCGTTACCCGGTGTTCCAGGCGGGCGTTCGCGTCTGCATC
GGCAAGGAGCTAGCCCTCATGGAGATGAAAGCCGTCATCGTCGCCGTCGTCCGGAGCTTC
GACATCGAGGCGATCGCGCGGAGCTCGCGGCGGCCCAAGTTCGCGCCGGGCCTGACCGCC
ACGTTCGCAGGCGGCTTGCCGGTGAGAGTGCGCCGGCGGCGAGCACGTGCGAGCGGGCAC
AACCCGCCAATTTAA

Peptide Sequence

PEP ID

Os01t0858350-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:37097377:37099130:-1 gene:Os01g0858350 transcript:Os01t0858350-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cytochrome P450. (Os01t0858350-01)
Sequence

MGVVEAEALHGAVEALAGSLQPHVATAFFVFSACTVALAALLAVVRLRPPWWCDCTVCEA
FLTASWAGEFDNLCDWYAHLLRTSPAQTVHVHVLRNVLTANPVTVDHVLRARFDNYPKGA
PFSAILADFLGRGIFNVDGDAWLFQRKLAAAELASPALRAFAARVVASELRCRLIPLLHS
ASREGNGKVLDLQDMFRRFAFDSICKISFGLDPGCLELSMPVSTLVEAFDTASTLSARRA
TVPMQIIWRLKRFLNVGDERKLRDAVRLVDALAAEVIRQRRKLGGAATGSDLLSRFMGSI
DDDKYLRDIVVSFMLAGRDTIASALTAFFLLLSDHPEVATAIRDEVARVTGDGNRTMAAT
FDKLKDMHYVHAAMYESMRLFPPVQFDSKFAAGDDTLPDGTVVAKGTRVTYHAYAMGRME
SVWGPDCAEFRPERWLRDGRFVPESPYRYPVFQAGVRVCIGKELALMEMKAVIVAVVRSF
DIEAIARSSRRPKFAPGLTATFAGGLPVRVRRRRARASGHNPPI

Transcript Sequence

Transcript ID

Os01t0858350-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:37097377:37099130:-1 gene:Os01g0858350 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cytochrome P450. (Os01t0858350-01)
Sequence

CACAAGCAAACGCACGCGCCCCCGCCTATGAAAGCCCGCGCGCACCACGCACACACGCAC
GCACGCAGTCGCAGGCGCCGCAGCTCGTCTCCATGGGTGTCGTCGAGGCAGAGGCGTTGC
ATGGGGCGGTGGAGGCCCTGGCTGGGTCGCTGCAGCCGCACGTGGCCACCGCCTTCTTCG
TGTTCTCGGCGTGCACGGTGGCCCTCGCCGCGCTCCTTGCCGTGGTGCGCCTGCGCCCGC
CGTGGTGGTGCGACTGCACCGTGTGCGAGGCCTTCCTGACGGCGTCGTGGGCGGGAGAGT
TCGACAACCTCTGCGACTGGTACGCCCACCTGCTGCGCACCTCGCCGGCGCAGACCGTGC
ACGTGCACGTCCTCCGCAACGTGCTCACCGCCAACCCGGTCACCGTCGACCACGTGCTCC
GCGCCCGCTTCGACAACTATCCCAAGGGCGCTCCCTTCTCCGCCATCCTCGCCGACTTCC
TCGGCCGCGGGATATTTAACGTCGACGGTGACGCGTGGCTCTTCCAGCGCAAGCTCGCCG
CTGCCGAGCTCGCCTCTCCGGCGCTCCGCGCCTTCGCGGCGCGTGTCGTGGCCTCCGAGC
TGAGGTGCCGCCTCATCCCTCTGCTCCACTCTGCTTCACGTGAGGGCAACGGCAAGGTGC
TCGACCTGCAAGACATGTTCCGCCGCTTCGCCTTCGACAGCATATGCAAGATCTCGTTTG
GCCTCGACCCTGGCTGCCTCGAGCTGTCGATGCCTGTATCGACGCTCGTGGAAGCGTTCG
ACACGGCGTCGACACTCTCCGCGCGGCGGGCGACGGTGCCCATGCAGATAATCTGGAGGC
TGAAGCGGTTCTTGAACGTCGGGGACGAAAGGAAGCTCCGGGACGCGGTCCGTTTGGTCG
ACGCGCTCGCGGCGGAGGTCATCCGACAACGGCGGAAGCTTGGCGGCGCTGCCACCGGCA
GCGACCTCCTTTCACGCTTCATGGGCTCCATCGACGACGACAAGTACCTCCGCGACATCG
TCGTCAGCTTCATGCTCGCCGGCCGCGACACCATCGCCTCGGCGCTCACCGCCTTCTTTC
TGCTCCTCTCCGATCACCCAGAGGTCGCCACCGCCATCCGAGACGAGGTCGCCCGCGTCA
CGGGCGACGGCAACCGAACCATGGCCGCCACATTCGACAAGCTCAAGGACATGCACTATG
TGCACGCCGCGATGTACGAGAGCATGCGCCTGTTCCCGCCAGTGCAGTTCGATTCCAAGT
TTGCCGCCGGCGACGATACGCTGCCGGACGGCACGGTCGTCGCGAAGGGCACCCGGGTGA
CCTACCACGCCTACGCCATGGGCCGGATGGAGTCCGTATGGGGCCCCGACTGCGCCGAGT
TCCGGCCGGAGCGATGGCTCCGGGACGGCCGGTTCGTCCCGGAGAGCCCGTACCGTTACC
CGGTGTTCCAGGCGGGCGTTCGCGTCTGCATCGGCAAGGAGCTAGCCCTCATGGAGATGA
AAGCCGTCATCGTCGCCGTCGTCCGGAGCTTCGACATCGAGGCGATCGCGCGGAGCTCGC
GGCGGCCCAAGTTCGCGCCGGGCCTGACCGCCACGTTCGCAGGCGGCTTGCCGGTGAGAG
TGCGCCGGCGGCGAGCACGTGCGAGCGGGCACAACCCGCCAATTTAATAGGTAGAGCAAA
CAAACTGGTTCGTGTCATCACGATTTGTTCTTCTGTGCTTCTTTTCGAACTGGAATATTA
ATTAGGTTACATGC