Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0858000-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:37080266:37085162:-1 gene:Os01g0858000 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD40 repeat domain containing protein. (Os01t0858000-00)
Sequence	ATGCCGTTAATCGGGAGAGGTATAATTCAAGTTTGGTGTCTCCTAGCACCATCTGAAGAG GGTCATCCTCATCAGTCATTGGTTGCATGCAATAAATATAATCCATCCAATCAACCAAAA CAAAGGGGTAGACCAAGAAAGACCATCACAACTTCTGATGATCACTTGGAACCAAGTGTC AAAAGACCAAGGGGCAGACCAAGAAAATATCCACTGCCAATTGCCAAAGTGGAAGATTCA TCCCAAAACGACAGAAGTCAAGAGTTTGCTCTTATTTATCCTCTTGTCAGTCCAGCAGTT GTTTCATGTGACATTGCAATAGCTTATCCCATGCCAACTGTTAATCCTGTGGAATCAACT CCAAGAAAAGGTAGAGGGCGACCTAGGAAAAAACCTGTTGAAATAAAAGGTTTGTCTGGC ATTAAACTAACAGAAGACTTGTCTACAGCTCTATCTCCAATAGCTTTAACCTGCATGGAG CCCAAGAAAAAAAGGGGGAGGCCCCGAAAGTATCCTGCTCCAAGCAACAGCAAGCATCTT CCAGGCACTGATACTGAATTAGGAAATGATTCTGTCTGTCAGCCTGGTTCAATTGATTTT GGTTTGGGTCCCACTGAAAATACTGGGTCTGGTGCTAATATAACTCATGCTGCAGTTGAT GCAGCCTCCCCAGTTCCATTGTCAGGTCAGAGGGGTAGAGAACAGCCAGAAAAGGAAGTA ATTCATATTGAGAATTCCATGCAATCTGGACAGTCTGACATAGGATCCATGTTGCCTACG TATATTTTACCTGAATCAGGCAACAAGAGTAACTCAACTGGTCTGAGGCGGAGGGGACGA CCTAGGAAGAAACCATTTCCGAGTACAACCAGTTGTGTATTTGTTCCTGGTACTGAGACC CCAAAGAAAGGTTCTACTCTGACCAATTCAAATAATCTCGTGGTCTTGGCCAAGAGTAAT TGTGACATTTTAGCAAATGATATTGGTCCATCAAGCTGTGCTATAGAGAACAGTGTCCAT TTGAGTGTTGGAACATCTCATGCTGCAACACCAGCACAGGGCATATGTCTTGCAAAATGC AAGGAAGAATCAAGTGCCAAGAAGGGTAGAGGCAGACCTAGAAAGCAGCCAATTTCAACG GAATGCGGTTGTTCTAAAGCATGCAGGGGTGAAGAACAAAAAACTCAGACAATTCCCAAG TCAAGCGACAATGCGTCCTTGGTTGAAAATTGCAAGAAAGAATCATGTCCCGGAAAGGGC AGAGTGCAAGATAAAAAGAAATCTGTTTCAAATGAAAGAAGTTCAGTAGTGCTTAGTGTT GAAGCACAGAACATGGACGGATCTTCTGCATCAACTGCATATACTTCATGTTGTACTCCT GCTTGTAACTTTGAAAACGCAGAGACAAATCAGGCTGTATCTGTTCCTTCCGAAAACAGT GCTCAGGTTATTGATGAACTAAAAGATACAGAAGTGGCTCGATTCAAAGAATCAACTAAA GATGATAATATGATTTGTTCTGCAGAAAAGACCCTTTCTCGTGTCCCAAAAGACATTTCT CTACCAAGGGTTGTCTTATGTTTAGCTCATAATGGAAAAGTTGCTTGGGACGTAAAATGG AAACCTCCTTCAGCAAATCAGTCAGAACATAAATCATGTTTGGGTTTTCTTGCAGTACTC TTGGGGAATGGCTCGCTTGAAGTATGGGAAGTTCCATCTCCAAGCATGATTCAGAAAATA TATTCCTCTTCTTCAAAGGAGGGTACTGACCCTCGATTTTTAAAGCTGAAGCCTGTGTTT AGCTCTGCCAAAGTAAAGTGCGGGAACAGACAAAGCATTCCCTTGACAGTTGATTGGTCA CCCTCTCATGATATGATATTGGCGGGATGTCACGATGGAACGGTTGCTTTATGGAAGTTC TCTGCAAACCTGTCATTTCAAGGTTCAAAACCTTTTATGTGTGTAACTGCTGAATCTGCT CCCATCAGAACCGTGTCGTGGGCACCATCTGTGAGTAAGGAAAACGTGAATACCTTTGTC ACTGCTGGAGAGGATGGTCTGAAATTCTGGGATTTAAGAGATCCATATCGTCATCTTTGG GAGTTAACTACTGCTCCAAGGGCCGTAATAAGTCTTCAATGGTTGAAGGATGCAAGAGGT GTTGTCATATCATTGGAAGATGGCACATTAAAGTTCGTTAGCTTGTCAAGAATCGCAAAT GATGTTCCTTTTACTGGAAGGCCATTTGTTGGAACGAAAACTCAGGGTGTTTCTACCTAT CAATTGTCTGAATATTTGATCTGGAGTGTCCATGCCTCAGAAATTACAGGCTATGCGGCT TATTGTGTGGCTGATGGAACTGCTGTTTGCTTTGAGCTTACTCCGAGATTCTGGGAAAAG GAACCTGGGAGGAACCGTGTACCATATTTTCTTTGTGGTTCATTATCAGAGGAGGGAACA ACCATTAAAATTGGTATCGCATTACCAAACTCTCCTTTGTCAAATGTTCCTCTGGGGACC AAACGGGCTACTAAAACTTGCAAAGATGTAGCTCAATTGCATGTTATAGAAGAAGGGAAA CTTCTTACCAACTCAGGTAATCTCTGTCACCTGCAACTTAGATGGTCAACAAGATGA

Peptide Sequence

PEP ID	Os01t0858000-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:37080266:37085162:-1 gene:Os01g0858000 transcript:Os01t0858000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD40 repeat domain containing protein. (Os01t0858000-00)
Sequence	MPLIGRGIIQVWCLLAPSEEGHPHQSLVACNKYNPSNQPKQRGRPRKTITTSDDHLEPSV KRPRGRPRKYPLPIAKVEDSSQNDRSQEFALIYPLVSPAVVSCDIAIAYPMPTVNPVEST PRKGRGRPRKKPVEIKGLSGIKLTEDLSTALSPIALTCMEPKKKRGRPRKYPAPSNSKHL PGTDTELGNDSVCQPGSIDFGLGPTENTGSGANITHAAVDAASPVPLSGQRGREQPEKEV IHIENSMQSGQSDIGSMLPTYILPESGNKSNSTGLRRRGRPRKKPFPSTTSCVFVPGTET PKKGSTLTNSNNLVVLAKSNCDILANDIGPSSCAIENSVHLSVGTSHAATPAQGICLAKC KEESSAKKGRGRPRKQPISTECGCSKACRGEEQKTQTIPKSSDNASLVENCKKESCPGKG RVQDKKKSVSNERSSVVLSVEAQNMDGSSASTAYTSCCTPACNFENAETNQAVSVPSENS AQVIDELKDTEVARFKESTKDDNMICSAEKTLSRVPKDISLPRVVLCLAHNGKVAWDVKW KPPSANQSEHKSCLGFLAVLLGNGSLEVWEVPSPSMIQKIYSSSSKEGTDPRFLKLKPVF SSAKVKCGNRQSIPLTVDWSPSHDMILAGCHDGTVALWKFSANLSFQGSKPFMCVTAESA PIRTVSWAPSVSKENVNTFVTAGEDGLKFWDLRDPYRHLWELTTAPRAVISLQWLKDARG VVISLEDGTLKFVSLSRIANDVPFTGRPFVGTKTQGVSTYQLSEYLIWSVHASEITGYAA YCVADGTAVCFELTPRFWEKEPGRNRVPYFLCGSLSEEGTTIKIGIALPNSPLSNVPLGT KRATKTCKDVAQLHVIEEGKLLTNSGNLCHLQLRWSTR

Transcript Sequence

Transcript ID	Os01t0858000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:37080266:37085162:-1 gene:Os01g0858000 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD40 repeat domain containing protein. (Os01t0858000-00)
Sequence	ATGCCGTTAATCGGGAGAGGTATAATTCAAGTTTGGTGTCTCCTAGCACCATCTGAAGAG GGTCATCCTCATCAGTCATTGGTTGCATGCAATAAATATAATCCATCCAATCAACCAAAA CAAAGGGGTAGACCAAGAAAGACCATCACAACTTCTGATGATCACTTGGAACCAAGTGTC AAAAGACCAAGGGGCAGACCAAGAAAATATCCACTGCCAATTGCCAAAGTGGAAGATTCA TCCCAAAACGACAGAAGTCAAGAGTTTGCTCTTATTTATCCTCTTGTCAGTCCAGCAGTT GTTTCATGTGACATTGCAATAGCTTATCCCATGCCAACTGTTAATCCTGTGGAATCAACT CCAAGAAAAGGTAGAGGGCGACCTAGGAAAAAACCTGTTGAAATAAAAGGTTTGTCTGGC ATTAAACTAACAGAAGACTTGTCTACAGCTCTATCTCCAATAGCTTTAACCTGCATGGAG CCCAAGAAAAAAAGGGGGAGGCCCCGAAAGTATCCTGCTCCAAGCAACAGCAAGCATCTT CCAGGCACTGATACTGAATTAGGAAATGATTCTGTCTGTCAGCCTGGTTCAATTGATTTT GGTTTGGGTCCCACTGAAAATACTGGGTCTGGTGCTAATATAACTCATGCTGCAGTTGAT GCAGCCTCCCCAGTTCCATTGTCAGGTCAGAGGGGTAGAGAACAGCCAGAAAAGGAAGTA ATTCATATTGAGAATTCCATGCAATCTGGACAGTCTGACATAGGATCCATGTTGCCTACG TATATTTTACCTGAATCAGGCAACAAGAGTAACTCAACTGGTCTGAGGCGGAGGGGACGA CCTAGGAAGAAACCATTTCCGAGTACAACCAGTTGTGTATTTGTTCCTGGTACTGAGACC CCAAAGAAAGGTTCTACTCTGACCAATTCAAATAATCTCGTGGTCTTGGCCAAGAGTAAT TGTGACATTTTAGCAAATGATATTGGTCCATCAAGCTGTGCTATAGAGAACAGTGTCCAT TTGAGTGTTGGAACATCTCATGCTGCAACACCAGCACAGGGCATATGTCTTGCAAAATGC AAGGAAGAATCAAGTGCCAAGAAGGGTAGAGGCAGACCTAGAAAGCAGCCAATTTCAACG GAATGCGGTTGTTCTAAAGCATGCAGGGGTGAAGAACAAAAAACTCAGACAATTCCCAAG TCAAGCGACAATGCGTCCTTGGTTGAAAATTGCAAGAAAGAATCATGTCCCGGAAAGGGC AGAGTGCAAGATAAAAAGAAATCTGTTTCAAATGAAAGAAGTTCAGTAGTGCTTAGTGTT GAAGCACAGAACATGGACGGATCTTCTGCATCAACTGCATATACTTCATGTTGTACTCCT GCTTGTAACTTTGAAAACGCAGAGACAAATCAGGCTGTATCTGTTCCTTCCGAAAACAGT GCTCAGGTTATTGATGAACTAAAAGATACAGAAGTGGCTCGATTCAAAGAATCAACTAAA GATGATAATATGATTTGTTCTGCAGAAAAGACCCTTTCTCGTGTCCCAAAAGACATTTCT CTACCAAGGGTTGTCTTATGTTTAGCTCATAATGGAAAAGTTGCTTGGGACGTAAAATGG AAACCTCCTTCAGCAAATCAGTCAGAACATAAATCATGTTTGGGTTTTCTTGCAGTACTC TTGGGGAATGGCTCGCTTGAAGTATGGGAAGTTCCATCTCCAAGCATGATTCAGAAAATA TATTCCTCTTCTTCAAAGGAGGGTACTGACCCTCGATTTTTAAAGCTGAAGCCTGTGTTT AGCTCTGCCAAAGTAAAGTGCGGGAACAGACAAAGCATTCCCTTGACAGTTGATTGGTCA CCCTCTCATGATATGATATTGGCGGGATGTCACGATGGAACGGTTGCTTTATGGAAGTTC TCTGCAAACCTGTCATTTCAAGGTTCAAAACCTTTTATGTGTGTAACTGCTGAATCTGCT CCCATCAGAACCGTGTCGTGGGCACCATCTGTGAGTAAGGAAAACGTGAATACCTTTGTC ACTGCTGGAGAGGATGGTCTGAAATTCTGGGATTTAAGAGATCCATATCGTCATCTTTGG GAGTTAACTACTGCTCCAAGGGCCGTAATAAGTCTTCAATGGTTGAAGGATGCAAGAGGT GTTGTCATATCATTGGAAGATGGCACATTAAAGTTCGTTAGCTTGTCAAGAATCGCAAAT GATGTTCCTTTTACTGGAAGGCCATTTGTTGGAACGAAAACTCAGGGTGTTTCTACCTAT CAATTGTCTGAATATTTGATCTGGAGTGTCCATGCCTCAGAAATTACAGGCTATGCGGCT TATTGTGTGGCTGATGGAACTGCTGTTTGCTTTGAGCTTACTCCGAGATTCTGGGAAAAG GAACCTGGGAGGAACCGTGTACCATATTTTCTTTGTGGTTCATTATCAGAGGAGGGAACA ACCATTAAAATTGGTATCGCATTACCAAACTCTCCTTTGTCAAATGTTCCTCTGGGGACC AAACGGGCTACTAAAACTTGCAAAGATGTAGCTCAATTGCATGTTATAGAAGAAGGGAAA CTTCTTACCAACTCAGGTAATCTCTGTCACCTGCAACTTAGATGGTCAACAAGATGAACC TGATGAAGGACAAGAAACCGGTGCCATAGTTTTAGCTGCTCCTTCAATGCAAGAGAATTT TGACACAAGCACCAGCAGGGGTAGTGAATCCCCTGAAAATTTTGAGGTCTTTCCTCCTAA AGCTGTAGCATTGCATCGGTTGAGATGGAACATGAATAAAGGTAGCGAGAAATGGTTGTG CTATGGAGGTGCTGCAGGCATTATCCGGTGTCAGAGGATCTAAGAAACAAGAGCACACTT GAGGAA