Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0857700-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:37069395:37071889:-1 gene:Os01g0857700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to G10. (Os01t0857700-01)
Sequence

ATGCCTAAAATAAAGACAAGCCGTGTCAAATATCCTGGAGGATGGGAGCTTATTGAACCA
ACTATCCGTGAGTTGGATGCCAAAATGAGGGAAGCTGAAAATGACACACATGATGGGAAG
AGAAAGTGCGAAGCCCTCTGGCCAATTTTCCGTATTTCCCATCAAAGAAGTCGCTACATA
TATGATCTTTATTACAGAAGGAAGGAGATATCAAAAGAGTTGTATGAGTTTTGCCTGGAC
CAGGGTTATGCAGACCGTAATCTGATTGCAAAGTGGAAAAAGCCGGGTTATGAGCGCCTT
TGCTGTCTTCGATGCATACAGACACGAGACCACAACTTTGCAACTACATGCGTCTGCCGG
GTCCCCAAGCATCTCAGAGAGGAGAAGGTTATAGAATGTGTTCACTGTGGATGCAGAGGC
TGTGCCAGCGGTGATTGA

Peptide Sequence

PEP ID

Os01t0857700-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:37069395:37071889:-1 gene:Os01g0857700 transcript:Os01t0857700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to G10. (Os01t0857700-01)
Sequence

MPKIKTSRVKYPGGWELIEPTIRELDAKMREAENDTHDGKRKCEALWPIFRISHQRSRYI
YDLYYRRKEISKELYEFCLDQGYADRNLIAKWKKPGYERLCCLRCIQTRDHNFATTCVCR
VPKHLREEKVIECVHCGCRGCASGD

Transcript Sequence

Transcript ID

Os01t0857700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:37069395:37071889:-1 gene:Os01g0857700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to G10. (Os01t0857700-01)
Sequence

AAACCCGCCCGTCTCCTCTTCGGCCGTCTTTGCTCGACCGGAGCGGAGCGCAGCGCAGGC
CAACGGCGTGGACGACGCGCGCCCCCTCTGGATCGCCGCTCCCCCGCGCGCCACAGCTTC
CATCCGGCGACTGCAAGGCCGCCCAAGCCAAGAGGGTTTCTTTGCAAGCTTTAGCCGCTC
GACGTTCATTGACAGAACATGCCTAAAATAAAGACAAGCCGTGTCAAATATCCTGGAGGA
TGGGAGCTTATTGAACCAACTATCCGTGAGTTGGATGCCAAAATGAGGGAAGCTGAAAAT
GACACACATGATGGGAAGAGAAAGTGCGAAGCCCTCTGGCCAATTTTCCGTATTTCCCAT
CAAAGAAGTCGCTACATATATGATCTTTATTACAGAAGGAAGGAGATATCAAAAGAGTTG
TATGAGTTTTGCCTGGACCAGGGTTATGCAGACCGTAATCTGATTGCAAAGTGGAAAAAG
CCGGGTTATGAGCGCCTTTGCTGTCTTCGATGCATACAGACACGAGACCACAACTTTGCA
ACTACATGCGTCTGCCGGGTCCCCAAGCATCTCAGAGAGGAGAAGGTTATAGAATGTGTT
CACTGTGGATGCAGAGGCTGTGCCAGCGGTGATTGAGATATCGTCATTATCTTGTTTGAA
TCTGTCAAACTAAGCAGACATAATGTTTCTTGAGCGAAATTTCGGCTAAAAACGTTTACG
AAAACGTTTTGTAAACCCGCCTACCGGGTATGACGTTATTTAAGTACCTGAGATTGTGGT
TACGGTCTGCATTAATCTGCCGCATGGTCATTGCTTGATCATCGGCCTCAACACCCTGCA
TATGTGTATTCTAAAGTTTTTTAATGGAAACATCTGTTACTCGATGCTATAATTGCCGCT
ATGGTCTTTGAAG