Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0857200-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:37034026:37035656:-1 gene:Os01g0857200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Di-trans-poly-cis-decaprenylcistransferase family protein. (Os01t0857200-01)
Sequence

ATGCGCCAAGCCGCCAACACCATGCTGCCCTCCCACTCTCCAGCTGCTACCCATCAGCTA
CCCACCTCCCCTCGCCGCAGCACGCGCCCCGCGCCGCCACCACCATGCCCATGCCCGCGC
GCCGGCGCAGCCCCGGCGGCCGAGTCTCTCCTCCCTGGATGCCTTCGGGCGGAGTCGCTG
CCCCGGCACGTGGCGGTGGTGATGGACGGGAACGCGCGGTGGGCGCGGGCGCGGGGGCTC
CCGTCGGCGGCCGGGCACGAGGCCGGGCGGCGCGCGCTGGAGGAGACGGTGCGTCTCTCC
CGCGCCTGGGGCATCCGCGCGCTCACTGCCTTCGCCTTCTCCAACGAGAACTGGAGCCGC
CCCAAGGTGGAGGTGGACTTCTTGATGAGGCTGTTCGAGCGGGTGATCCACGATAGCGTC
GCCGAGTTTCTGAGGGAAGGAATTCGGCTACGTGTAATCGGTGACAGCTCAAGGCTACCG
GTTTCTCTACAGAAGATTGCGAGAGAAGCCGAGGAGACCACGAGGAACAATTCACAGCTT
GATCTGACACTGGCAATCAGCTACAGCGGGAGGAGGGACATCGTGCAGGCGTGCCGGAAG
CTTGCCCAGAAGGTGCAGAGCAAGGCGCTCGCGGCGGAGGACATCGACGAGGCGCTGTTC
GCCGACGAGCTCGAGACGAGCTGCGCGGCCGACGAGTTCCCGTACCCCGACCTTCTCATC
AGGACCAGCGGCGAGCTGAGGCTGAGCAACTTCTTGCTGTGGCAGTCAGCGTACTCGGAG
CTCTTCTTCACCAACACGCTGTGGCCTGATTTCGGGGAGGCTGATTACCTCGAAGCGCTT
TGCTCCTTCCAGAGCAGAGACAGGCGATTTGGTGTAAGAAAATTGTAG

Peptide Sequence

PEP ID

Os01t0857200-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:37034026:37035656:-1 gene:Os01g0857200 transcript:Os01t0857200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Di-trans-poly-cis-decaprenylcistransferase family protein. (Os01t0857200-01)
Sequence

MRQAANTMLPSHSPAATHQLPTSPRRSTRPAPPPPCPCPRAGAAPAAESLLPGCLRAESL
PRHVAVVMDGNARWARARGLPSAAGHEAGRRALEETVRLSRAWGIRALTAFAFSNENWSR
PKVEVDFLMRLFERVIHDSVAEFLREGIRLRVIGDSSRLPVSLQKIAREAEETTRNNSQL
DLTLAISYSGRRDIVQACRKLAQKVQSKALAAEDIDEALFADELETSCAADEFPYPDLLI
RTSGELRLSNFLLWQSAYSELFFTNTLWPDFGEADYLEALCSFQSRDRRFGVRKL

Transcript Sequence

Transcript ID

Os01t0857200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:37034026:37035656:-1 gene:Os01g0857200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Di-trans-poly-cis-decaprenylcistransferase family protein. (Os01t0857200-01)
Sequence

GGGGGCAATGCGCCAAGCCGCCAACACCATGCTGCCCTCCCACTCTCCAGCTGCTACCCA
TCAGCTACCCACCTCCCCTCGCCGCAGCACGCGCCCCGCGCCGCCACCACCATGCCCATG
CCCGCGCGCCGGCGCAGCCCCGGCGGCCGAGTCTCTCCTCCCTGGATGCCTTCGGGCGGA
GTCGCTGCCCCGGCACGTGGCGGTGGTGATGGACGGGAACGCGCGGTGGGCGCGGGCGCG
GGGGCTCCCGTCGGCGGCCGGGCACGAGGCCGGGCGGCGCGCGCTGGAGGAGACGGTGCG
TCTCTCCCGCGCCTGGGGCATCCGCGCGCTCACTGCCTTCGCCTTCTCCAACGAGAACTG
GAGCCGCCCCAAGGTGGAGGTGGACTTCTTGATGAGGCTGTTCGAGCGGGTGATCCACGA
TAGCGTCGCCGAGTTTCTGAGGGAAGGAATTCGGCTACGTGTAATCGGTGACAGCTCAAG
GCTACCGGTTTCTCTACAGAAGATTGCGAGAGAAGCCGAGGAGACCACGAGGAACAATTC
ACAGCTTGATCTGACACTGGCAATCAGCTACAGCGGGAGGAGGGACATCGTGCAGGCGTG
CCGGAAGCTTGCCCAGAAGGTGCAGAGCAAGGCGCTCGCGGCGGAGGACATCGACGAGGC
GCTGTTCGCCGACGAGCTCGAGACGAGCTGCGCGGCCGACGAGTTCCCGTACCCCGACCT
TCTCATCAGGACCAGCGGCGAGCTGAGGCTGAGCAACTTCTTGCTGTGGCAGTCAGCGTA
CTCGGAGCTCTTCTTCACCAACACGCTGTGGCCTGATTTCGGGGAGGCTGATTACCTCGA
AGCGCTTTGCTCCTTCCAGAGCAGAGACAGGCGATTTGGTGTAAGAAAATTGTAGCACAA
ACATACAAAAGTTGAAGCATGAAAGGAATGTTGATCAAGAAGCATAGGACATCACATTTT
TCATGTTAGTTCAATACTTCAATTATCCATGTTAAAGGCAAGTCTGAACATACAGTACAA
GAAGAGCCAAAAATATGTAGAAAAGCAATTCAGCAAGTGAAAACACCATGACAACTAGGC
ATACTGAGTAGAAAAATGTTGCTATGAAATTGCAAGATGAGGAGCACAAACACGAATGTC
ATGTATATGGCATTTGATTCACAGAACCACAAACAAACAGGTTTATACAAGGAAC