Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0857000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:37023827:37031493:-1 gene:Os01g0857000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:- description:Double-stranded RNA-binding-like domain containing protein. (Os01t0857000-01);Similar to CPL2 (CTD phosphatase-like 2); double-stranded RNA binding. (Os01t0857000-02)
Sequence	ATGGCGACGCCCCGCGCCCCGCCCCAGGCGGCCGTCCCCGGAGGAGGGGCCGGTGCCACC GCCGGTGGGGTCACCATGCGGATGTTCCACGGCGACGTGTTCCTCGGCGAGGCGGAGGTG TTCCCGATGAAGCAGGGGGCCGAGGGGAGCCTGCCGTTCCCGAGCAACGAGATCCGCATC AGCCACCTCTCGCCGACGAGCGAGCGGTGCCCGCCGCTCGCCATCCTGCAGACCATCGCG CCCTTCTCCGTGCGATGCAAGCTCCAGGCCAAGCTGATGCCTCCCCACCCGAGCCTACAC CGCCTCTACCTCACTTGCTTCAACGAGTACAAGAGCGCAGTGGTAGTAGTTGGAGATGAG GAGCTACACCTAGTGGCAATGCCGAGCAAGGTGGAGAAGGTGCCATGCTTTTGGTGCTGT TCAGTACGCTCTGGGATCTATGCAGCATCTGTTGGGATGCTGAACTTGCGGTGCCTTGCT ATCGTATTTGATCTCGATGAAACCCTTATTGTCGCTAACACAATGAAGTCCTTTGAGGAC CGGATCGAGATGCTTTCCCGTAGGATGGATATTGAAGACGACCCCGTCAGGATAGCAGGG ATGTCTGCAGAAATCAAGCGGTATATTGAGGACAGGGAGCTGCTCAAGGAGTTCATTGAC ACAGATACAGTTACAGATAATGGCAGAATCGTTGGGACCCAAAAGGAGGAAGTTCTGCCT ATCTCTGGTGGGCAGGAGCGTGTTCTCCGGCCTGTTATCAGGCTGCCAGAAAGGAATGCG ATTCTAACTCGCATAAATCCAGAGGTTCGCGATACTAGTGTTTTTGTAAAGCTAAGGCCT GCTTGGGAGGATTTGAGAAGTTACCTGACTGCTAAGGGACGCAAACGATTTGAGGTCTAT GTATGTACAATGGCTGAGAGAGATTATGCTCTTGAGATGTGGAGGCTTCTTGATCCAGAA GCCAACTTGATAAGCTCTCATAACCTTGCAGAGCGTGTAGTATGTGTAAAGTCAGGTTCG AAAAAGTGTCTGCAGAATGTTTTTAAAGACAAAGGATGCCATCCGAAGATGGCCATGGTA ATTGATGACCGACTGCAGGTTTGGGATGAGAAGGATCAACCTCGAGTTCATGTTGTCCCA GCATATACTCCATATTATGCCCCACAAGCTGAGATGGCAAATGCTGTGCCTGTGCTTTGT GTTGCAAGAAATGTTGCTTGCAATGTTCGTGGTGGTTTCTTCAGAGAGTTCGATGAAAAT CTATTGAGAAAAGTGTTTGAACTAATGTATGAAAATGAGTTGCTAGATCTTCCATATGCT CCTGATGTTGGTGACTACTTAGTCTGTGAGGACACTAATTTTGCACCAAACAATAAGGAT GTTGCCCCTATACCTGAGGGTATGAGTGGAGCTGAAGTAGGGAAGAGGTTGAATGGGCTG GCATATCCTAGAGACCAGAAACAAATACCATCATCAACCCGTTTGTCAGATGACGACGGA GTGGCACTCCGTGGCATTCCAGGTGGTACAAATATCCAATCTAACGGGGGATCATTGGCA ACAACCCCCTCATTATTTGTCACGGTGTTGCAAGAAATTGGACGGCTGTGCGAATCCAGG GTGGAGTTCAGGTCTACTGTAAGCAGTGGAAAAAACATGCAATTTTCTGTTGAGGTTCTA TTTAGTAATGAAAAAATCGGGATCGGCATTGGAAAAACAAGAGATGAAGCCCAAGTACTA GCTGCTGAAAAAGCTCTCCAGAATTTGGAAAGCAATTACTTGTCATTCATGGCTCCTGTT GCTGGAGTTCTTAATAAAGATGTGAACAAGCCTCCTGGGAGTGGAAATGGCTTTCTCGAA GATATTACTCTCTCAGAGGATATTTCTATGGAAGAGCCATCTGGAAGTACATTAAAAGAA CAGGATCATTCAAAAGCTTTGGATAGGTTGTCCTCTGTTATAAGTCTTATTAGAGAACTT TGCTTGGAGGACCAACATGTAGTATTTCGCGATCAAGTACGGGATTCTGGCTCAGCATTA AATGGAGAATACCATTTCCAGGCTGAATTAGGAGGACAAATTCTTGGGAGGGGCATTGAT TTGAACAAAGATTTTGCGAAGCTTCAGGCTGCAGAAGAGGCGCTGAAGACCTTGAAAACA ACTACGGACCCACAAATCAAGAAGCATTTGAGACCAATGCAACAGCTGAATTTCCCCTTA TATCCCACAGAGGTGAGTTTGATAATGTTGAAATGTGAGGCCAGCTGTTGA

Peptide Sequence

PEP ID	Os01t0857000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:37023827:37031493:-1 gene:Os01g0857000 transcript:Os01t0857000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:- description:Double-stranded RNA-binding-like domain containing protein. (Os01t0857000-01);Similar to CPL2 (CTD phosphatase-like 2); double-stranded RNA binding. (Os01t0857000-02)
Sequence	MATPRAPPQAAVPGGGAGATAGGVTMRMFHGDVFLGEAEVFPMKQGAEGSLPFPSNEIRI SHLSPTSERCPPLAILQTIAPFSVRCKLQAKLMPPHPSLHRLYLTCFNEYKSAVVVVGDE ELHLVAMPSKVEKVPCFWCCSVRSGIYAASVGMLNLRCLAIVFDLDETLIVANTMKSFED RIEMLSRRMDIEDDPVRIAGMSAEIKRYIEDRELLKEFIDTDTVTDNGRIVGTQKEEVLP ISGGQERVLRPVIRLPERNAILTRINPEVRDTSVFVKLRPAWEDLRSYLTAKGRKRFEVY VCTMAERDYALEMWRLLDPEANLISSHNLAERVVCVKSGSKKCLQNVFKDKGCHPKMAMV IDDRLQVWDEKDQPRVHVVPAYTPYYAPQAEMANAVPVLCVARNVACNVRGGFFREFDEN LLRKVFELMYENELLDLPYAPDVGDYLVCEDTNFAPNNKDVAPIPEGMSGAEVGKRLNGL AYPRDQKQIPSSTRLSDDDGVALRGIPGGTNIQSNGGSLATTPSLFVTVLQEIGRLCESR VEFRSTVSSGKNMQFSVEVLFSNEKIGIGIGKTRDEAQVLAAEKALQNLESNYLSFMAPV AGVLNKDVNKPPGSGNGFLEDITLSEDISMEEPSGSTLKEQDHSKALDRLSSVISLIREL CLEDQHVVFRDQVRDSGSALNGEYHFQAELGGQILGRGIDLNKDFAKLQAAEEALKTLKT TTDPQIKKHLRPMQQLNFPLYPTEVSLIMLKCEASC

Transcript Sequence

Transcript ID	Os01t0857000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:37023827:37031493:-1 gene:Os01g0857000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:- description:Double-stranded RNA-binding-like domain containing protein. (Os01t0857000-01);Similar to CPL2 (CTD phosphatase-like 2); double-stranded RNA binding. (Os01t0857000-02)
Sequence	CTCTCTCTCTCCAATTCCTCCCTCTCGCCCGCGATGGCGACGCCCCGCGCCCCGCCCCAG GCGGCCGTCCCCGGAGGAGGGGCCGGTGCCACCGCCGGTGGGGTCACCATGCGGATGTTC CACGGCGACGTGTTCCTCGGCGAGGCGGAGGTGTTCCCGATGAAGCAGGGGGCCGAGGGG AGCCTGCCGTTCCCGAGCAACGAGATCCGCATCAGCCACCTCTCGCCGACGAGCGAGCGG TGCCCGCCGCTCGCCATCCTGCAGACCATCGCGCCCTTCTCCGTGCGATGCAAGCTCCAG GCCAAGCTGATGCCTCCCCACCCGAGCCTACACCGCCTCTACCTCACTTGCTTCAACGAG TACAAGAGCGCAGTGGTAGTAGTTGGAGATGAGGAGCTACACCTAGTGGCAATGCCGAGC AAGGTGGAGAAGGTGCCATGCTTTTGGTGCTGTTCAGTACGCTCTGGGATCTATGCAGCA TCTGTTGGGATGCTGAACTTGCGGTGCCTTGCTATCGTATTTGATCTCGATGAAACCCTT ATTGTCGCTAACACAATGAAGTCCTTTGAGGACCGGATCGAGATGCTTTCCCGTAGGATG GATATTGAAGACGACCCCGTCAGGATAGCAGGGATGTCTGCAGAAATCAAGCGGTATATT GAGGACAGGGAGCTGCTCAAGGAGTTCATTGACACAGATACAGTTACAGATAATGGCAGA ATCGTTGGGACCCAAAAGGAGGAAGTTCTGCCTATCTCTGGTGGGCAGGAGCGTGTTCTC CGGCCTGTTATCAGGCTGCCAGAAAGGAATGCGATTCTAACTCGCATAAATCCAGAGGTT CGCGATACTAGTGTTTTTGTAAAGCTAAGGCCTGCTTGGGAGGATTTGAGAAGTTACCTG ACTGCTAAGGGACGCAAACGATTTGAGGTCTATGTATGTACAATGGCTGAGAGAGATTAT GCTCTTGAGATGTGGAGGCTTCTTGATCCAGAAGCCAACTTGATAAGCTCTCATAACCTT GCAGAGCGTGTAGTATGTGTAAAGTCAGGTTCGAAAAAGTGTCTGCAGAATGTTTTTAAA GACAAAGGATGCCATCCGAAGATGGCCATGGTAATTGATGACCGACTGCAGGTTTGGGAT GAGAAGGATCAACCTCGAGTTCATGTTGTCCCAGCATATACTCCATATTATGCCCCACAA GCTGAGATGGCAAATGCTGTGCCTGTGCTTTGTGTTGCAAGAAATGTTGCTTGCAATGTT CGTGGTGGTTTCTTCAGAGAGTTCGATGAAAATCTATTGAGAAAAGTGTTTGAACTAATG TATGAAAATGAGTTGCTAGATCTTCCATATGCTCCTGATGTTGGTGACTACTTAGTCTGT GAGGACACTAATTTTGCACCAAACAATAAGGATGTTGCCCCTATACCTGAGGGTATGAGT GGAGCTGAAGTAGGGAAGAGGTTGAATGGGCTGGCATATCCTAGAGACCAGAAACAAATA CCATCATCAACCCGTTTGTCAGATGACGACGGAGTGGCACTCCGTGGCATTCCAGGTGGT ACAAATATCCAATCTAACGGGGGATCATTGGCAACAACCCCCTCATTATTTGTCACGGTG TTGCAAGAAATTGGACGGCTGTGCGAATCCAGGGTGGAGTTCAGGTCTACTGTAAGCAGT GGAAAAAACATGCAATTTTCTGTTGAGGTTCTATTTAGTAATGAAAAAATCGGGATCGGC ATTGGAAAAACAAGAGATGAAGCCCAAGTACTAGCTGCTGAAAAAGCTCTCCAGAATTTG GAAAGCAATTACTTGTCATTCATGGCTCCTGTTGCTGGAGTTCTTAATAAAGATGTGAAC AAGCCTCCTGGGAGTGGAAATGGCTTTCTCGAAGATATTACTCTCTCAGAGGATATTTCT ATGGAAGAGCCATCTGGAAGTACATTAAAAGAACAGGATCATTCAAAAGCTTTGGATAGG TTGTCCTCTGTTATAAGTCTTATTAGAGAACTTTGCTTGGAGGACCAACATGTAGTATTT CGCGATCAAGTACGGGATTCTGGCTCAGCATTAAATGGAGAATACCATTTCCAGGCTGAA TTAGGAGGACAAATTCTTGGGAGGGGCATTGATTTGAACAAAGATTTTGCGAAGCTTCAG GCTGCAGAAGAGGCGCTGAAGACCTTGAAAACAACTACGGACCCACAAATCAAGAAGCAT TTGAGACCAATGCAACAGCTGAATTTCCCCTTATATCCCACAGAGGTGAGTTTGATAATG TTGAAATGTGAGGCCAGCTGTTGATAACATGCCATTTTCAAAATTGTGGCATTCTGGCAA TCCATTGGTTTATTACTGGAAGCGCTTCTCCAATTATGGTTGGCTGGCTGCCTCTTGAAC CATGATTTTCATGCAAAGTGTTTTTTGCCTCTCCGAGTTTAGAAGGTGATAAATTATAGA GAATTGGGCATGGTGCATCGTGGATTCTGTTGACCTTGGACCGTTTGCTCCATACAACCA AAGCTGTAATCTTCACAGGATACTGGCGTAGTTGGATAGCTGTAAACAGGTAGGGGTAGG GGTATGTCATGAATATTGACTGTTTCCTTGACGGATACAGTTATTTGTAAACAAGTTAGT TTAATTAAAGTGGAATGTCCACGCTGATATTTC