Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0855600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:36942716:36944585:-1 gene:Os01g0855600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:putative nematode-resistance protein description:Similar to Hs1pro-1 protein. (Os01t0855600-01)
Sequence	ATGGCAACGCCCAAGCTGTCCCCTGTATCGCCGGTGCGGCCGGAAGATAAGCAGCGCGCG TCCTCCTCGTCGTCGTCGGGGGCGGTGGCTGCGCCTCTGAGGGTGCAGGACGATACGGCG GTCGAGGAGTACGAGCAGTACCTGCGGCTTCCGGAGCTCGCAAGGCTGTGGAAGGATAGG TGCTGTCCGGAGTGGGCCGACGAGGGCCTCGTCAAGCCGGCGCTGCAGGCGCTGGAGATC ACCTTCCGCTTCATCTCCGTCGCGCTCTCCGACCCGCGGGGCTACGCCAGCCGCCGCGAG CTCGCGCGGCGGCTGGAGGCGCTCGCGGCAAGGGAGGTGGAGCTGGTGGCCGCGCTCTGC GAGGGCGAGCAGTGCCCGCCGCTGGCCGAGCTGAGCGCGTCCAAAGGCGTGCTCCCGCGG GAGCGGAGCGCGTCTGAGGTGTGGAAGATTCCCGGTAGCGCCGCCGCGGTGGTGTGCCAG GTCAGCGAGGCCAGCCTGCTCCCGCGGCTCGCCGCTTGGGACAAGTCCGAGACCGTGGCG GCCAGGATCAAGTACGCCATCGAGAGCCAGATGCAGGGCTGCGTGTTCACCCTCGGCCTC GGCGAGCCCAACCTCGCCGGCAAGCCGGTGCTCGAGTACGACCGCGTCGTGAGGCCGCAC GAGCTGCACGCCCTCAAGGCGAAGATCGCGCCGGAGCCCAAGACCGGCTACCGCAACAAG GAGAACGAGGCGCTGTTCACTATCCACCAGATACTCGAGTCCTGGCTGTGCGCGGCCTCA CAGCTTCTCACCCGCCTAAACAACCGGATCGAAGCAAGAAACTGGGAGGCCGCGGCGAGC GACTGCTGGATCCTGGAACGCGTCTGGAAGCTGCTCGCCGACGTCGAGGACCTGCACCTG CTGATGGACCCGGACGACTTCCTGCGGCTCAAGAGCCAGCTCGCAATACGGGCGGCACCG GGCTCCGACGCGTCCTCCTGCTTCCGCTCCAGGGCGCTGCTGCACGTCGCTAACGCCACG AGGGACCTCAAGAAGCGTGTGCCATGTGTGCTTGGCGTCGAGGTGGACCCCAACGGCGGG CCGAGGGTGCAGGAGGCAGCCATGAGGCTGTTCCACAGCCGGCGGCGCGGCGAGGGCGAG GAGGCCGGCAAGGTGGAGCTGCTGCAGGCGTTCCAGGCCGTGGAGGCGGCGGTGAGGAGG TTCTTCTTCGCGTACCGGCAGCTCGTGGCGGCGGTGATGGGCACCGCGGAGTCGTCGACC AACCGCGCGCTGTTCTCGCCGGCGGAGGAGATGGACCCCCTGGCGCAGATGTTCCTCGAG CCGCCCTACTTCCCCAGCCTCGACGCCGCCAAGACGTTCTTGGCCGACTACTGGGTACGG CGGATGGCCGGTGACGGTGACTCTGCTTCGTCCAGGCGAAGCTGA

Peptide Sequence

PEP ID	Os01t0855600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:36942716:36944585:-1 gene:Os01g0855600 transcript:Os01t0855600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:putative nematode-resistance protein description:Similar to Hs1pro-1 protein. (Os01t0855600-01)
Sequence	MATPKLSPVSPVRPEDKQRASSSSSSGAVAAPLRVQDDTAVEEYEQYLRLPELARLWKDR CCPEWADEGLVKPALQALEITFRFISVALSDPRGYASRRELARRLEALAAREVELVAALC EGEQCPPLAELSASKGVLPRERSASEVWKIPGSAAAVVCQVSEASLLPRLAAWDKSETVA ARIKYAIESQMQGCVFTLGLGEPNLAGKPVLEYDRVVRPHELHALKAKIAPEPKTGYRNK ENEALFTIHQILESWLCAASQLLTRLNNRIEARNWEAAASDCWILERVWKLLADVEDLHL LMDPDDFLRLKSQLAIRAAPGSDASSCFRSRALLHVANATRDLKKRVPCVLGVEVDPNGG PRVQEAAMRLFHSRRRGEGEEAGKVELLQAFQAVEAAVRRFFFAYRQLVAAVMGTAESST NRALFSPAEEMDPLAQMFLEPPYFPSLDAAKTFLADYWVRRMAGDGDSASSRRS

Transcript Sequence

Transcript ID	Os01t0855600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:36942716:36944585:-1 gene:Os01g0855600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:putative nematode-resistance protein description:Similar to Hs1pro-1 protein. (Os01t0855600-01)
Sequence	AAACTCAAAGACAAGCGAGGATTAGCGATCGATAACTGGAGGGAGTATACAGTTGGAAAA TTCAAACTAGACGCTGATCATATCGAGGGAGAGTTCAACTCAACTGGAGCGCGGAGATGG CAACGCCCAAGCTGTCCCCTGTATCGCCGGTGCGGCCGGAAGATAAGCAGCGCGCGTCCT CCTCGTCGTCGTCGGGGGCGGTGGCTGCGCCTCTGAGGGTGCAGGACGATACGGCGGTCG AGGAGTACGAGCAGTACCTGCGGCTTCCGGAGCTCGCAAGGCTGTGGAAGGATAGGTGCT GTCCGGAGTGGGCCGACGAGGGCCTCGTCAAGCCGGCGCTGCAGGCGCTGGAGATCACCT TCCGCTTCATCTCCGTCGCGCTCTCCGACCCGCGGGGCTACGCCAGCCGCCGCGAGCTCG CGCGGCGGCTGGAGGCGCTCGCGGCAAGGGAGGTGGAGCTGGTGGCCGCGCTCTGCGAGG GCGAGCAGTGCCCGCCGCTGGCCGAGCTGAGCGCGTCCAAAGGCGTGCTCCCGCGGGAGC GGAGCGCGTCTGAGGTGTGGAAGATTCCCGGTAGCGCCGCCGCGGTGGTGTGCCAGGTCA GCGAGGCCAGCCTGCTCCCGCGGCTCGCCGCTTGGGACAAGTCCGAGACCGTGGCGGCCA GGATCAAGTACGCCATCGAGAGCCAGATGCAGGGCTGCGTGTTCACCCTCGGCCTCGGCG AGCCCAACCTCGCCGGCAAGCCGGTGCTCGAGTACGACCGCGTCGTGAGGCCGCACGAGC TGCACGCCCTCAAGGCGAAGATCGCGCCGGAGCCCAAGACCGGCTACCGCAACAAGGAGA ACGAGGCGCTGTTCACTATCCACCAGATACTCGAGTCCTGGCTGTGCGCGGCCTCACAGC TTCTCACCCGCCTAAACAACCGGATCGAAGCAAGAAACTGGGAGGCCGCGGCGAGCGACT GCTGGATCCTGGAACGCGTCTGGAAGCTGCTCGCCGACGTCGAGGACCTGCACCTGCTGA TGGACCCGGACGACTTCCTGCGGCTCAAGAGCCAGCTCGCAATACGGGCGGCACCGGGCT CCGACGCGTCCTCCTGCTTCCGCTCCAGGGCGCTGCTGCACGTCGCTAACGCCACGAGGG ACCTCAAGAAGCGTGTGCCATGTGTGCTTGGCGTCGAGGTGGACCCCAACGGCGGGCCGA GGGTGCAGGAGGCAGCCATGAGGCTGTTCCACAGCCGGCGGCGCGGCGAGGGCGAGGAGG CCGGCAAGGTGGAGCTGCTGCAGGCGTTCCAGGCCGTGGAGGCGGCGGTGAGGAGGTTCT TCTTCGCGTACCGGCAGCTCGTGGCGGCGGTGATGGGCACCGCGGAGTCGTCGACCAACC GCGCGCTGTTCTCGCCGGCGGAGGAGATGGACCCCCTGGCGCAGATGTTCCTCGAGCCGC CCTACTTCCCCAGCCTCGACGCCGCCAAGACGTTCTTGGCCGACTACTGGGTACGGCGGA TGGCCGGTGACGGTGACTCTGCTTCGTCCAGGCGAAGCTGAGCGGCGGAAATAGTGGCGG ATGGATGCCGCCGGACCCTGAATTTTGCAGTCTTTCAAGGTTGATGATACATTTAATACA TTTATGATTTATTTCTGTAGGGTAGTGGTCGCGTTCATCTTTCAGTTCGAGTAAATGTTT TATTGGGAGACATTTTGGTTTAGATTTGATTACTAGATGGTAACGGGAAAATGATCTAGG ATCATATATTTCAATTAGAGTACTGATGATGTATATAATGCTCTGTAAATATGTTTCAAT GGATTATGTGTCCGATATTGATAATGTTTGATGTACTACGAATTGTTTCAAAGGAAAAAT TATTTCCTAA