Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0854000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:36794890:36796983:1 gene:Os01g0854000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to AER. (Os01t0854000-01)
Sequence

ATGGCTCAGATGCTCTCCGCCGTGGCCATGGTGGGCGCCGCCTCGGCCGCGTCGCCCATT
GTGACGAAGAGCCTCGTCGGCGTGGACGCGCCGGCGTCGGGCATCACGGTCGTGTCGAGA
CAGGACGTGCGCCCGGACGGCGCTTCGGCGGTCGGGGACCTCACGCTGTCCGTCTCCGAC
CTGCCCATGCTGTCGTGCCACTACATCCAGAAGGGCCTCTTCTTCCCCGCCCCCGACGTG
CCCATGGCTTCCCTGGTTTCGTTGCTCATGTCTTCGCTGTCTCGGGCGCTCGCCATCTTC
CCGACCCTCGCCGGCCGCCTTGTCACGCTCCCCGATGATCGCGTCGTCATCCGCTGCAAC
GACGCCGGCGTCGAGTTCCGCCACGCCGTCGCGCCCAACCTGTCGCTGGATGACTTCATC
GTGCCCGACGCCGACGTCCCGACCAAGCTGACCAAGGACCTGTTCCCCATGGACCGCACC
GTGAGCTACGACGGCCACCGCCGCCCGCTCACGTCGTTCCAGGTCACCGTGCTCGGCGAC
GGCGCCGTGTTCATCGGCATCGTCGCGAACCACGCCGTGGTGGACGGGACCTCCTTTTGG
CACTTCTTTAATACATGGGCCGCCCTTTGCCGTGGCGCGTCACCCAAGCTGCCGGACTTC
CGCCGCAGCTTTTTTGGCGAGTCAACCGCCGTCCTCCGCTTTCCAGGAGGCGTGGGCCCC
GCCGTGACCTTCGACGCGGACGCGCCTCTCCGCGAGCGCGTCTTTCACTTCAGCGCGGAT
GCGATTCGCGAGCTCAAGGCAATCACTAACCGTCGCCCGAGCGGCGGTCAAGACGCCGAG
GTCTACGGCAAGATGGCGCACGATCGGAAGAATCCCGAAGGGCTCAGTGCGATCTCGTCG
TTCCAGTCACTGTGCGCGCAGATATGGCTCTCGGTGACGCGCGCGCGGCAGCGTCTGGCG
CCCGACGCGACGAGCACGTTCCGCATGGCGGTGAACTGCCGGCACAGGCTGCGCCCGGCG
ATCTCCCCTGTGTACTTCGGCAACGCCATCCAGAGCGCAGCAACCACGGCCACGGTGGCC
GAGCTGGCGTCCAACGACCTGCGGTGGGCGGCGGCCAAGCTCAACGCGAGCCTGGCGGCG
TACGACGACGGCGCGATACGCCGCGCCGCGGCGGCGTGGCAGGGCGCTCCCCGGTGCTTC
CCGCTGGGCAACCCGGACGGCGCGGTGATCACGATGGGGAGCTCGAACCGGTTCCCCATG
TATGAGGGCAACGACTTCGGGTGGGGCCGCCCCCTCGCGGTGCGGAGCGGCCGCGCCAAC
AAGTTCGATGGCAAGATGTCGGCGTTCCCTGCCCGCGCCGGGGACGGCAGCGTGGACATC
GAGGTGTGCCTCGCCCCCGACACCATGGCGGCGCTGCTCCGCGACAGCGAGTTCATGCAG
TTCGTGTCGTGA

Peptide Sequence

PEP ID

Os01t0854000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:36794890:36796983:1 gene:Os01g0854000 transcript:Os01t0854000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to AER. (Os01t0854000-01)
Sequence

MAQMLSAVAMVGAASAASPIVTKSLVGVDAPASGITVVSRQDVRPDGASAVGDLTLSVSD
LPMLSCHYIQKGLFFPAPDVPMASLVSLLMSSLSRALAIFPTLAGRLVTLPDDRVVIRCN
DAGVEFRHAVAPNLSLDDFIVPDADVPTKLTKDLFPMDRTVSYDGHRRPLTSFQVTVLGD
GAVFIGIVANHAVVDGTSFWHFFNTWAALCRGASPKLPDFRRSFFGESTAVLRFPGGVGP
AVTFDADAPLRERVFHFSADAIRELKAITNRRPSGGQDAEVYGKMAHDRKNPEGLSAISS
FQSLCAQIWLSVTRARQRLAPDATSTFRMAVNCRHRLRPAISPVYFGNAIQSAATTATVA
ELASNDLRWAAAKLNASLAAYDDGAIRRAAAAWQGAPRCFPLGNPDGAVITMGSSNRFPM
YEGNDFGWGRPLAVRSGRANKFDGKMSAFPARAGDGSVDIEVCLAPDTMAALLRDSEFMQ
FVS

Transcript Sequence

Transcript ID

Os01t0854000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:36794890:36796983:1 gene:Os01g0854000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to AER. (Os01t0854000-01)
Sequence

AGGGCAAGCAGAGGCAGCACTGCCCAAACCACCTCTTTGGCCTGAATTGCGCGACGCTAA
CGGCAGCACACTCTCCTGCTACTGCTCCATTAGCCAGCAGCCGGTGGCGCACAAACGCCA
ATCGATCGGAACGCATGGCTCAGATGCTCTCCGCCGTGGCCATGGTGGGCGCCGCCTCGG
CCGCGTCGCCCATTGTGACGAAGAGCCTCGTCGGCGTGGACGCGCCGGCGTCGGGCATCA
CGGTCGTGTCGAGACAGGACGTGCGCCCGGACGGCGCTTCGGCGGTCGGGGACCTCACGC
TGTCCGTCTCCGACCTGCCCATGCTGTCGTGCCACTACATCCAGAAGGGCCTCTTCTTCC
CCGCCCCCGACGTGCCCATGGCTTCCCTGGTTTCGTTGCTCATGTCTTCGCTGTCTCGGG
CGCTCGCCATCTTCCCGACCCTCGCCGGCCGCCTTGTCACGCTCCCCGATGATCGCGTCG
TCATCCGCTGCAACGACGCCGGCGTCGAGTTCCGCCACGCCGTCGCGCCCAACCTGTCGC
TGGATGACTTCATCGTGCCCGACGCCGACGTCCCGACCAAGCTGACCAAGGACCTGTTCC
CCATGGACCGCACCGTGAGCTACGACGGCCACCGCCGCCCGCTCACGTCGTTCCAGGTCA
CCGTGCTCGGCGACGGCGCCGTGTTCATCGGCATCGTCGCGAACCACGCCGTGGTGGACG
GGACCTCCTTTTGGCACTTCTTTAATACATGGGCCGCCCTTTGCCGTGGCGCGTCACCCA
AGCTGCCGGACTTCCGCCGCAGCTTTTTTGGCGAGTCAACCGCCGTCCTCCGCTTTCCAG
GAGGCGTGGGCCCCGCCGTGACCTTCGACGCGGACGCGCCTCTCCGCGAGCGCGTCTTTC
ACTTCAGCGCGGATGCGATTCGCGAGCTCAAGGCAATCACTAACCGTCGCCCGAGCGGCG
GTCAAGACGCCGAGGTCTACGGCAAGATGGCGCACGATCGGAAGAATCCCGAAGGGCTCA
GTGCGATCTCGTCGTTCCAGTCACTGTGCGCGCAGATATGGCTCTCGGTGACGCGCGCGC
GGCAGCGTCTGGCGCCCGACGCGACGAGCACGTTCCGCATGGCGGTGAACTGCCGGCACA
GGCTGCGCCCGGCGATCTCCCCTGTGTACTTCGGCAACGCCATCCAGAGCGCAGCAACCA
CGGCCACGGTGGCCGAGCTGGCGTCCAACGACCTGCGGTGGGCGGCGGCCAAGCTCAACG
CGAGCCTGGCGGCGTACGACGACGGCGCGATACGCCGCGCCGCGGCGGCGTGGCAGGGCG
CTCCCCGGTGCTTCCCGCTGGGCAACCCGGACGGCGCGGTGATCACGATGGGGAGCTCGA
ACCGGTTCCCCATGTATGAGGGCAACGACTTCGGGTGGGGCCGCCCCCTCGCGGTGCGGA
GCGGCCGCGCCAACAAGTTCGATGGCAAGATGTCGGCGTTCCCTGCCCGCGCCGGGGACG
GCAGCGTGGACATCGAGGTGTGCCTCGCCCCCGACACCATGGCGGCGCTGCTCCGCGACA
GCGAGTTCATGCAGTTCGTGTCGTGATCGTTCCGCCAGTGCGTGCGCGAGCGCGCGCGCG
ACTATTGGTCCATCGTGACACACATGCCGTTGCGCTGCGGCTTTGCGTCCGTTCCTGCCC
ATAGTTTGGTCCTTTGGTGCTAAGATAATGTATCCGTGTTCTGGTTGTGCAGTGCCAGCG
TGCCGTGGCAGTAGTAGACAGTGGTAACTAGTAGTAGTACTTGGATTGACTAGCTGTTAC
TATTACTTGTAACTACTCCAGCAAGCATTGGCGCGTTGCAGGGGGGATGGAGCTCGTGAA
ACTGCTTGATTGCTAAAGTCTTCCGGGCGTTCAAGTACGGTGAACCGATTAATTTGCGTT
TGATTAGGATGGATTTACCTTTTCCTTAGGACAGTCTCAACCCATGATGTGCATAAGTAG
TGTCTATGGTGCTGTGTCAATAAGACATCACAATAGAAACTGCATTCTACAACCACCATG
GTTGGTTTTTTAAAGTGGGCCATTAATAAATACAACATCTCTCTTCTTTATCAA