Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0853800-04
CDS Infomation

cds chromosome:IRGSP-1.0:1:36771053:36772295:1 gene:Os01g0853800 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os01t0853800-01);C2 calcium-dependent membrane targeting domain containing protein. (Os01t0853800-04)
Sequence

ATGGCTTCCCCGTCCCCGTCCTCCTCACCTCTCCACCCGCAGCATCAACACCAGCACCCG
CTTCCCCCGCACCCGCAGCCCCAGTACCAATCCCCACCGCCTCCGATGCCGCCGCCGCCC
CCCGCGGCGCCACTCAAAGCTATCGATCTGGAGGTGACCGTCGTCTCGGGCAAGCACCTG
AAGAACGTCAACTGGCGCCGCGGCGACCTCCGCGCCTACGTCGTCGCCTACCTCGACCCT
TCCCGCCGCGCCGCCACCCGCCCCGACGACGTCGGCGGCTGCAAGCCGGCATGGAACGAG
CGCGTCGTCCTCCCTCTCCCGCCCCACCTCTCCCCGCACGATCCGTCGCTGCTCCTCTCC
CTCGATGTCTTCCACTCCAAGCCCTCCGATTCGCCCAAGCCGCTCGTCGGCTCCGCCCGC
TCCCCTCTCCGTGACCTCCTCTTCTCAACCAACCCTAACCCTAGCCCCGATTCCCCCGCC
TCCGCGCTGATCACCCTCCCGCTCCTCCGCCCCTCCGGCCGCCCACAGGGGAAGCTCCGC
ATCCGCCTCGCCCTTCGCGAGCGCTCCCCGCCTCCTCCCGAGCCGCAGTATCCGCCTCCT
TCCTCCTCCCCCTACTATTTCCCACCCCCTCCGCCTCCCGCATACTCGGCCCCGCCTCCG
CCTCAATACGGCTCGGAGCAGTACTACCGTTCCGGTGGGTACTACTCTGCACCACCGCCA
CCGCCTCAGTATGAGTACACCGCAGGGCCCTCTGCCCCGGTGGAATACAACAGGCAATAT
GATCCTAGAGCGGGGAGTGGGAGTGGAAATGGGAGGTATGGAGTAGGCACTGGGATTGCA
GTGGGAACGGTGACGGGGGCCCTTGGAGGGCTTGCAATTGATGAAGGTGTGAAATACAAA
GAGGAGAAGTCGGCAGATCGGGTTGAAGATAAGGTAGTGCCTGCTGGAAGAGATGACGAC
TCAAGGGGGTACCGTGAGTATTGA

Peptide Sequence

PEP ID

Os01t0853800-04
PEP Infomation

pep chromosome:IRGSP-1.0:1:36771053:36772295:1 gene:Os01g0853800 transcript:Os01t0853800-04 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os01t0853800-01);C2 calcium-dependent membrane targeting domain containing protein. (Os01t0853800-04)
Sequence

MASPSPSSSPLHPQHQHQHPLPPHPQPQYQSPPPPMPPPPPAAPLKAIDLEVTVVSGKHL
KNVNWRRGDLRAYVVAYLDPSRRAATRPDDVGGCKPAWNERVVLPLPPHLSPHDPSLLLS
LDVFHSKPSDSPKPLVGSARSPLRDLLFSTNPNPSPDSPASALITLPLLRPSGRPQGKLR
IRLALRERSPPPPEPQYPPPSSSPYYFPPPPPPAYSAPPPPQYGSEQYYRSGGYYSAPPP
PPQYEYTAGPSAPVEYNRQYDPRAGSGSGNGRYGVGTGIAVGTVTGALGGLAIDEGVKYK
EEKSADRVEDKVVPAGRDDDSRGYREY

Transcript Sequence

Transcript ID

Os01t0853800-04
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:36771053:36772295:1 gene:Os01g0853800 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os01t0853800-01);C2 calcium-dependent membrane targeting domain containing protein. (Os01t0853800-04)
Sequence

GCGAGCCGCCACCAAGCCAAACCAGAGCACTCCGCCGCCGCGCCATGGCTTCCCCGTCCC
CGTCCTCCTCACCTCTCCACCCGCAGCATCAACACCAGCACCCGCTTCCCCCGCACCCGC
AGCCCCAGTACCAATCCCCACCGCCTCCGATGCCGCCGCCGCCCCCCGCGGCGCCACTCA
AAGCTATCGATCTGGAGGTGACCGTCGTCTCGGGCAAGCACCTGAAGAACGTCAACTGGC
GCCGCGGCGACCTCCGCGCCTACGTCGTCGCCTACCTCGACCCTTCCCGCCGCGCCGCCA
CCCGCCCCGACGACGTCGGCGGCTGCAAGCCGGCATGGAACGAGCGCGTCGTCCTCCCTC
TCCCGCCCCACCTCTCCCCGCACGATCCGTCGCTGCTCCTCTCCCTCGATGTCTTCCACT
CCAAGCCCTCCGATTCGCCCAAGCCGCTCGTCGGCTCCGCCCGCTCCCCTCTCCGTGACC
TCCTCTTCTCAACCAACCCTAACCCTAGCCCCGATTCCCCCGCCTCCGCGCTGATCACCC
TCCCGCTCCTCCGCCCCTCCGGCCGCCCACAGGGGAAGCTCCGCATCCGCCTCGCCCTTC
GCGAGCGCTCCCCGCCTCCTCCCGAGCCGCAGTATCCGCCTCCTTCCTCCTCCCCCTACT
ATTTCCCACCCCCTCCGCCTCCCGCATACTCGGCCCCGCCTCCGCCTCAATACGGCTCGG
AGCAGTACTACCGTTCCGGTGGGTACTACTCTGCACCACCGCCACCGCCTCAGTATGAGT
ACACCGCAGGGCCCTCTGCCCCGGTGGAATACAACAGGCAATATGATCCTAGAGCGGGGA
GTGGGAGTGGAAATGGGAGGTATGGAGTAGGCACTGGGATTGCAGTGGGAACGGTGACGG
GGGCCCTTGGAGGGCTTGCAATTGATGAAGGTGTGAAATACAAAGAGGAGAAGTCGGCAG
ATCGGGTTGAAGATAAGGTAGTGCCTGCTGGAAGAGATGACGACTCAAGGGGGTACCGTG
AGTATTGATTATAGGAGTTCATGTGGGTGAGGATGCACTGTGAGTTGGTCCTTCTCCATC
CCTGCCAATGTGGGAATAAAATTGCAGTGTGGTATTATGCTTCGCTCTCTTGTATATATT
TTCTTCAGTGTTGTGAATTATCATGTTACTTATGCTTATGGCTTGCGTCTTATGACAAAT
TTGGTGTGTGTTATGAATGTTCTATTATCATATTTAAAACTGT