Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0852900-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:36732966:36737390:1 gene:Os01g0852900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0852900-01);Hypothetical conserved gene. (Os01t0852900-02)
Sequence	CTTGAGCTCCTCGTCTCCACCCGCCCGGCCTTCCCACCGCCCCAGCCGCTCCTCTTCCAC CTCCTCCGCCGCCTCGCCACCTCTTCCCCGTCCCACCTCCCTCGCCTCCTCAACCTCCTC CCGCGGCTGCGCCACCGCCCGCGCTTCTCCGAGTCCGCGGCGCTCGTCGTCCTATCCGCC TTCTCCCGCGCCATCATGCCCGACGCCGCGCTCGACGCCTTCCGCGCCCTCCCTTCCATC CTCGGCTGCAACCCCGGCATCCGCTCCCACAACGCCCTCCTCGACGCGTTCGTCCGCGCC CGTCGTTTCTCCGACGCGGACGCGTTCTTTGCCTCCCTCTCCCATGGCGCCTTCGGCCGC CGCATCGCCCCCAACCTTCAGACCTACAACATCGTCCTCCGCTCTCTCTGCGCCCGTGGC GACCTCGATCGAGCGGTCACTCTGTTCGACTCCCTGCGACGCCGCCAAGTTGCTCCCGAC CGCATCACCTATTCGACCCTCATGTGCGGGCTCGCGAAACAGGACCGCTTGGATCACGCC CTCGACCTGCTCGACGAAATGCCGAGGAGTAGAGTTCAGCCTGATGTCGTTTGTTACAAT GCACTCCTCGGTGGGTGTTTTAAGGCCGGTGAGTTCGAGAAAGTCATGAGGGTGTGGGAC AAACTGGTTAAGGACCCAGGTGCAAGGCCCAACCTCGCTACTTACAATGTGATGCTTGAT GGATTGTGTAAGTTTGGGAGATTCAAGGAGGTGGGTGAGGTCTGGGAAAGGATGGTGGCA AATAATCTCCAACCAGATGTAATTACCTATGGGATCTTGATCCATGGTTTGTGCCGATCT GGAGATGTGGATGGTGCAGCACGAGTATACTCTGAGATTATCAAGACTGGGCTTGTTATT GATGCTGCCATGTATAATTCACTCGTCAAGGGGTTCTGTCAAGCAGGGAGGGTACAGGAA GCTTGGAAGTTCTGGGATAGTGCTGGGTTTGCAGGGCTTCGTAATTTAAGAACTTACAAT ATAATGATAAAGGGGCTCTTTGACAGTGGTATGGTTGATGAGGCTATAGAGTTATGGGAC CTATTGGAGAAAGATGTGGCTTGCATTCCTGACACAGTGACTTTTGGCACTCTGATCCAT GGATTATGCCAGAATGGCTTTGCTAATAAGGCATTTACAATATTTGAGGAAGCTCGAGTC AGTGGCAAACAATTAGATGTGTTCTCATATTCATCCATGATCAATGGATTATGCAATGTT GGGAGGTTAGTTGATGCGGTTAAAGTATATGAGAAGATGGATAAGGATGGGTGCAAACCG AATTCTCATATTTACAATGCACTAATAAGTGGGTTCTGCCAAGTATACAGGACTAGTGAT GCTGTTAGAATTTACAGCAAGATGGCAGACAATGGTTGTTCTCCTACAGTCATCACATAC AACACTTTAATAGATGGTCTGTGTAAGGCTGAAAAGTATCAAGAAGCTTCAAGTGTTGCA AGGGAAATGGTAGAGAATGGCTTTACACCAGATATCACTACTTATGGATCGTTGATCCGT GGCCTTTTTAGTGACAAGAAGATTGATGATGCTCTTTCTATTTGGAAACAAATTCTTTAT AAGGGTCTCAAGGTTGATGTGATGATGCATAACATCCTAATCCATGGCCTTTGTTCTGCT GGCAAAGTTGATGAAGCTCTCCATGTTTTCTCAGATATGAAAGAGAAGAAGAATTGTCCC CCAAATCTAGTGACTTATAACACCCTGATGGATGGACTTTATGAAACTGGCTATATTGAC AAAGCAGCAACTCTCTGGACCTCCATAACAGAAGATGGGTTGGAACCAGACATAATTTCA TACAATACAAGAATCAAGGGCCTATGCTCTTGTGACAGAATACATGAGGGGATCCAGTTA TTGGATGAGGTTCTCTCACGAGGCATTATACCGACTGTAATTACATGGAATATACTTGTC AGGGCTGTAATCAAGTATGGACCTATCCAAGTATAA

Peptide Sequence

PEP ID	Os01t0852900-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:36732966:36737390:1 gene:Os01g0852900 transcript:Os01t0852900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0852900-01);Hypothetical conserved gene. (Os01t0852900-02)
Sequence	LELLVSTRPAFPPPQPLLFHLLRRLATSSPSHLPRLLNLLPRLRHRPRFSESAALVVLSA FSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGR RIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHA LDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLD GLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVI DAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWD LLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNV GRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITY NTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILY KGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYID KAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV RAVIKYGPIQV

Transcript Sequence

Transcript ID	Os01t0852900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:36732966:36737390:1 gene:Os01g0852900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0852900-01);Hypothetical conserved gene. (Os01t0852900-02)
Sequence	CTTGAGCTCCTCGTCTCCACCCGCCCGGCCTTCCCACCGCCCCAGCCGCTCCTCTTCCAC CTCCTCCGCCGCCTCGCCACCTCTTCCCCGTCCCACCTCCCTCGCCTCCTCAACCTCCTC CCGCGGCTGCGCCACCGCCCGCGCTTCTCCGAGTCCGCGGCGCTCGTCGTCCTATCCGCC TTCTCCCGCGCCATCATGCCCGACGCCGCGCTCGACGCCTTCCGCGCCCTCCCTTCCATC CTCGGCTGCAACCCCGGCATCCGCTCCCACAACGCCCTCCTCGACGCGTTCGTCCGCGCC CGTCGTTTCTCCGACGCGGACGCGTTCTTTGCCTCCCTCTCCCATGGCGCCTTCGGCCGC CGCATCGCCCCCAACCTTCAGACCTACAACATCGTCCTCCGCTCTCTCTGCGCCCGTGGC GACCTCGATCGAGCGGTCACTCTGTTCGACTCCCTGCGACGCCGCCAAGTTGCTCCCGAC CGCATCACCTATTCGACCCTCATGTGCGGGCTCGCGAAACAGGACCGCTTGGATCACGCC CTCGACCTGCTCGACGAAATGCCGAGGAGTAGAGTTCAGCCTGATGTCGTTTGTTACAAT GCACTCCTCGGTGGGTGTTTTAAGGCCGGTGAGTTCGAGAAAGTCATGAGGGTGTGGGAC AAACTGGTTAAGGACCCAGGTGCAAGGCCCAACCTCGCTACTTACAATGTGATGCTTGAT GGATTGTGTAAGTTTGGGAGATTCAAGGAGGTGGGTGAGGTCTGGGAAAGGATGGTGGCA AATAATCTCCAACCAGATGTAATTACCTATGGGATCTTGATCCATGGTTTGTGCCGATCT GGAGATGTGGATGGTGCAGCACGAGTATACTCTGAGATTATCAAGACTGGGCTTGTTATT GATGCTGCCATGTATAATTCACTCGTCAAGGGGTTCTGTCAAGCAGGGAGGGTACAGGAA GCTTGGAAGTTCTGGGATAGTGCTGGGTTTGCAGGGCTTCGTAATTTAAGAACTTACAAT ATAATGATAAAGGGGCTCTTTGACAGTGGTATGGTTGATGAGGCTATAGAGTTATGGGAC CTATTGGAGAAAGATGTGGCTTGCATTCCTGACACAGTGACTTTTGGCACTCTGATCCAT GGATTATGCCAGAATGGCTTTGCTAATAAGGCATTTACAATATTTGAGGAAGCTCGAGTC AGTGGCAAACAATTAGATGTGTTCTCATATTCATCCATGATCAATGGATTATGCAATGTT GGGAGGTTAGTTGATGCGGTTAAAGTATATGAGAAGATGGATAAGGATGGGTGCAAACCG AATTCTCATATTTACAATGCACTAATAAGTGGGTTCTGCCAAGTATACAGGACTAGTGAT GCTGTTAGAATTTACAGCAAGATGGCAGACAATGGTTGTTCTCCTACAGTCATCACATAC AACACTTTAATAGATGGTCTGTGTAAGGCTGAAAAGTATCAAGAAGCTTCAAGTGTTGCA AGGGAAATGGTAGAGAATGGCTTTACACCAGATATCACTACTTATGGATCGTTGATCCGT GGCCTTTTTAGTGACAAGAAGATTGATGATGCTCTTTCTATTTGGAAACAAATTCTTTAT AAGGGTCTCAAGGTTGATGTGATGATGCATAACATCCTAATCCATGGCCTTTGTTCTGCT GGCAAAGTTGATGAAGCTCTCCATGTTTTCTCAGATATGAAAGAGAAGAAGAATTGTCCC CCAAATCTAGTGACTTATAACACCCTGATGGATGGACTTTATGAAACTGGCTATATTGAC AAAGCAGCAACTCTCTGGACCTCCATAACAGAAGATGGGTTGGAACCAGACATAATTTCA TACAATACAAGAATCAAGGGCCTATGCTCTTGTGACAGAATACATGAGGGGATCCAGTTA TTGGATGAGGTTCTCTCACGAGGCATTATACCGACTGTAATTACATGGAATATACTTGTC AGGGCTGTAATCAAGTATGGACCTATCCAAGTATAACACCTTCAAAGTCCTTATGCTTCT GGTGATGAGATATCCTGCTCGTAGATGACCTGAGCAACCAAACCAATGAATATTAGACCC AGAGCTGCAACCTTCCTCCACTCCACCTCAGGTGTTGCGAAGACGGCATTTGCAATTGTA AGCCCGAGTATTGCCATGAGCCCAAGGTAAATGTTCATCCTAGTTTTTGATCCTGCACTT TCTTTTGCAATATCTTTGACCTTTTGTGCTTCTAGCTTGGGTATTGGTTTTACTGTGAGT TTCTTCTTGTTGCGAGGCTTCACCTTCCCAAGGCTTTTGAAGAACATACCTTCATTTTTC TCCTTCTCAATCCAATCTTCGAAGTCTTCAAGCACCCTCTCGTTCATTTCTATCTCCTGC CTTTGAACTTCAGCAGTCTCCTCAAAGGCCTGCATCTTGCTGTCCAGCCTCTCCATTATC TACCACATCAGATCGAACTCGGTGTCCGCATCCTTCGCAAACTTGGTCAGGTAAGCAGAG CGCTCGTCCAAGAAGCTTGTGATGCGCACCTTCTGCGCCTGAAGCATTGCGATCTTCGCA AGGACCTCCTGCTGGCGTTTGTCTCCGCCAAGCGACGACGAAGCATCGGATCCATCATCT TCAGAGCTGCAGGCACGGATACAAGATCTCTTCCTCTTTAGCAGCGCACATCGGTATGGG GAGGATCTGTGTAGCGAAGGAATGGACATCCTAATGGTGTGAAGATTAAGCATCTCCTCT TAATCTTTGCTATGCTGCTGCTCTTGCTCTGCGAAGTACTATCGTGGAAGGATTTGTTTC TGCCCACCACTCGATGCTTGAGCAGTTGAGCTTGAGTTTGGGAACGATATCCTTTGGCTT TTAGCTTTCATGACAAGACCAATTTGCCCCTTGCATGTTGGGCATTCGCAGGTCCATTTC TTGGACGTTCCTTGCGTGTTGGGAATTATCAACTAGGTCCATTGTTTGGACCTTATCTGA GACATTGGGCACAACTTGTCGATACTTTAGTAAAAAAATATCTTCTTAC