Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0852200-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:36687545:36691370:-1 gene:Os01g0852200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHT4;3 description:Similar to sialin. (Os01t0852200-01);Similar to sialin. (Os01t0852200-02);Major facilitator superfamily protein. (Os01t0852200-03)
Sequence

ATGGCTCCTCCGGGCCAACTGCTCCCCTTGGCCCGCTCGCTCCTGCCCCTTTCCGCTCCT
CCCTTCGTCTCCGGCCGCCGCCGCCGCCTCCCTACTCTGGTCCTCGGCAGGGCGCTACCT
CCGCCTACATGGCTGCCGCACGGCCGCCTCTCGCCGGCGCATCCACTTCCCTTTGCGCCT
CCCCGGCGTCTGTCCAGGCCGCCTCCTCCCGCTACGTCGCTTCCTGGGGCTTCGCCCGGC
GGCGGAGCCGAGGCCCAGGCGGTGTTGGCGGAGTTCGTGACGTCCGAGAGGGTGAAGGTG
GCGGCGATGCTGGGGCTGGCTCTCGCGCTCTGCAACGCCGACCGCGTCGTCATGTCCGTC
GCCATCGTGCCGCTGTCGCAGGCGTACGGATGGACCCCGTCCTTCGCCGGCGTCGTGCAG
TCATCCTTCCTTTGGGGTTATCTGGTGTCACCAATAATTGGTGGAGCACTGGTCGACTAC
TATGGCGGAAAGCGAGTTATGGCTTATGGCGTGGCTCTATGGTCCTTGGCTACATTCCTC
TCCCCTTGGGCAGCTGCTCGCTCTCTCTGGTTGTTCCTCTCAACTAGAGTTCTGCTGGGT
ATGGCAGAAGGGGTGGCACTCCCAAGTATGAACAACATGGTGTTGAGGTGGTTTCCTCGC
ACAGAGCGATCAAGTGCTGTCGGGATTGCAATGGCTGGTTTTCAGCTTGGCAATACCATT
GGTTTACTTCTTTCCCCTATCATCATGTCACGAGCTGGAATTTTTGGACCATTTGTGATA
TTTGGATTATTTGGATTTCTATGGGTGTTGGTGTGGATATCTGCTATATCAGGGACTCCA
GGTGAAAATGCACAAATATCAGCACATGAACTAGATTATATAACCAGGGGTCAGAAATTG
GTAAAAACTCAATCTGGAGGTGAAAGATTACGAAAGGTCCCTCCTTTCAGCAAGCTACTC
TCTAAATGGCCAACATGGGCTTTAATTTCTGCAAATGCTATGCATAGTTGGGGTTATTTT
GTCATTCTTTCATGGATGCCAGTGTATTTCAAAACAATATATCATGTTAATCTGAGAGAA
GCTGCATGGTTTAGTGCACTCCCCTGGGTCATGATGGCAGTTTTAGGCTATGTTGCTGGT
GTTGTATCAGACAGGCTTATCCAAAATGGTACAAGCATCACTTTGACTCGGAAGATAATG
CAGACAATTGGCTTTGTGGGTCCTGGTGTGGCTCTTCTTGGACTAAATGCAGCAAAGAGT
CCAGTCATCGCTTCTGCTTGGCTTACTATCGCTGTAGGTTTGAAGTCCTTTGGTCACTCA
GGTTTTCTAGTAAATCTTCAGGAATGTCAAATACAGCTGGAACATTTGCTGCCATTTTAG

Peptide Sequence

PEP ID

Os01t0852200-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:36687545:36691370:-1 gene:Os01g0852200 transcript:Os01t0852200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHT4;3 description:Similar to sialin. (Os01t0852200-01);Similar to sialin. (Os01t0852200-02);Major facilitator superfamily protein. (Os01t0852200-03)
Sequence

MAPPGQLLPLARSLLPLSAPPFVSGRRRRLPTLVLGRALPPPTWLPHGRLSPAHPLPFAP
PRRLSRPPPPATSLPGASPGGGAEAQAVLAEFVTSERVKVAAMLGLALALCNADRVVMSV
AIVPLSQAYGWTPSFAGVVQSSFLWGYLVSPIIGGALVDYYGGKRVMAYGVALWSLATFL
SPWAAARSLWLFLSTRVLLGMAEGVALPSMNNMVLRWFPRTERSSAVGIAMAGFQLGNTI
GLLLSPIIMSRAGIFGPFVIFGLFGFLWVLVWISAISGTPGENAQISAHELDYITRGQKL
VKTQSGGERLRKVPPFSKLLSKWPTWALISANAMHSWGYFVILSWMPVYFKTIYHVNLRE
AAWFSALPWVMMAVLGYVAGVVSDRLIQNGTSITLTRKIMQTIGFVGPGVALLGLNAAKS
PVIASAWLTIAVGLKSFGHSGFLVNLQECQIQLEHLLPF

Transcript Sequence

Transcript ID

Os01t0852200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:36687545:36691370:-1 gene:Os01g0852200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHT4;3 description:Similar to sialin. (Os01t0852200-01);Similar to sialin. (Os01t0852200-02);Major facilitator superfamily protein. (Os01t0852200-03)
Sequence

ATCTGACACGTCACTCCACCAATCCACTTCATCGGAATCATCCATCACTTCCGCTCCCTC
CGCCGGCTTCCCCTTCGCCGGAGGAGAGGACGAAGGAAGGGATGGCTCCTCCGGGCCAAC
TGCTCCCCTTGGCCCGCTCGCTCCTGCCCCTTTCCGCTCCTCCCTTCGTCTCCGGCCGCC
GCCGCCGCCTCCCTACTCTGGTCCTCGGCAGGGCGCTACCTCCGCCTACATGGCTGCCGC
ACGGCCGCCTCTCGCCGGCGCATCCACTTCCCTTTGCGCCTCCCCGGCGTCTGTCCAGGC
CGCCTCCTCCCGCTACGTCGCTTCCTGGGGCTTCGCCCGGCGGCGGAGCCGAGGCCCAGG
CGGTGTTGGCGGAGTTCGTGACGTCCGAGAGGGTGAAGGTGGCGGCGATGCTGGGGCTGG
CTCTCGCGCTCTGCAACGCCGACCGCGTCGTCATGTCCGTCGCCATCGTGCCGCTGTCGC
AGGCGTACGGATGGACCCCGTCCTTCGCCGGCGTCGTGCAGTCATCCTTCCTTTGGGGTT
ATCTGGTGTCACCAATAATTGGTGGAGCACTGGTCGACTACTATGGCGGAAAGCGAGTTA
TGGCTTATGGCGTGGCTCTATGGTCCTTGGCTACATTCCTCTCCCCTTGGGCAGCTGCTC
GCTCTCTCTGGTTGTTCCTCTCAACTAGAGTTCTGCTGGGTATGGCAGAAGGGGTGGCAC
TCCCAAGTATGAACAACATGGTGTTGAGGTGGTTTCCTCGCACAGAGCGATCAAGTGCTG
TCGGGATTGCAATGGCTGGTTTTCAGCTTGGCAATACCATTGGTTTACTTCTTTCCCCTA
TCATCATGTCACGAGCTGGAATTTTTGGACCATTTGTGATATTTGGATTATTTGGATTTC
TATGGGTGTTGGTGTGGATATCTGCTATATCAGGGACTCCAGGTGAAAATGCACAAATAT
CAGCACATGAACTAGATTATATAACCAGGGGTCAGAAATTGGTAAAAACTCAATCTGGAG
GTGAAAGATTACGAAAGGTCCCTCCTTTCAGCAAGCTACTCTCTAAATGGCCAACATGGG
CTTTAATTTCTGCAAATGCTATGCATAGTTGGGGTTATTTTGTCATTCTTTCATGGATGC
CAGTGTATTTCAAAACAATATATCATGTTAATCTGAGAGAAGCTGCATGGTTTAGTGCAC
TCCCCTGGGTCATGATGGCAGTTTTAGGCTATGTTGCTGGTGTTGTATCAGACAGGCTTA
TCCAAAATGGTACAAGCATCACTTTGACTCGGAAGATAATGCAGACAATTGGCTTTGTGG
GTCCTGGTGTGGCTCTTCTTGGACTAAATGCAGCAAAGAGTCCAGTCATCGCTTCTGCTT
GGCTTACTATCGCTGTAGGTTTGAAGTCCTTTGGTCACTCAGGTTTTCTAGTAAATCTTC
AGGAATGTCAAATACAGCTGGAACATTTGCTGCCATTTTAGGAACTGTTGGAGCAGGTTT
CTTTGTCGATCGGATGGGTTCTTTCCGTGGATTTTTAATATTAACATCTCTTCTATACTT
CAGTAGCACACTGTTCTGGGATATATTTGCTACTGGAGAGCGTGTTGATTTTGATGGCAC
TGGCTAGCGCCTAAGAGAAAATCTACAGTTGCTATCCTAGAATATGATGATTGGTTGGAG
AATTATGTGCCATCATCTTCTGGTATGCTATTGGAAAGCTCCATGCACACAAGCAAACAG
AGTTATGACGTCTACCGATTATGGCATTGTGCTTCCATTTAGTAGGGGTAGCAGTGAAGA
AAAAATGGAACCAGCTACTGTGATCATTCGAATTTTCGTACTATGGAGACTGGAGAGTCC
AAAATGTGAGTCAAGGATAGCTGAAGCAGTTACACAGAACTAATGACTGGAGAGTCCAAA
ATGTGAGTCAAGGATAGGTGTGGTAATATTAGTTGTAGAGATCTGAAAATGATTGGCACT
TGACAAGAATTAAGCTTGGAATCAAGCACGGTTTGATGAGGGTTGTCAAGTTTTTAAATG
GAAAGTAGATGGAATACGTTTTAGTCCTTTATAGTTTTATAGTTAATAGAAAATATGACT
CAACAGTCATAGCCTCATAGGGCACCTTCGACTTTGTAAATGCCACAACATGTGGATGGC
TTTAAAGATCCAACGAATTGCAAGGATTTTCAGTTTCCTTCTGTTAAAAATTAGAATTCC
CGCATGGGGAATAGCTGAGAGAGAGAGAGAGAGAGAGAGAGAAGTCTCGTTGACTAGCCA
TACACGCAAATGAAGGGTGTGATATAAGGGATATAATGGTCGAATTTGCCCCACTGTAGG
GTTGTTAAGTACTCTCTTTGATTCACAGTTTTATCCAGTTCATGATAAACGATCATATCA
ACAATTTCAAGATACATGTTATTTTAGT