Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0851700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:36670321:36676478:-1 gene:Os01g0851700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Starch phosphorylase 2, plastidial starch phosphorylase2, plastidial starch phosphorylase 2 description:Similar to Cytosolic starch phosphorylase (Fragment). (Os01t0851700-01)
Sequence	ATGCCGGAGAGCAACGGCGCCGCGTGCGGCGCGGCGGAGAAGGTGAAGCCGGCGGCCAGC CCCGCGTCGGAGGAGCCGGCCGCCATCGCCGGTAACATCTCCTTCCACGCGCAGTACAGC CCCCACTTCTCGCCGCTCGCGTTCGGCCCCGAGCAGGCCTTCTACTCCACCGCCGAGAGC GTCCGCGATCACCTCGTCCAGAGATGGAACGAGACGTACTTGCATTTCCACAAGACGGAT CCGAAGCAGACGTACTACCTCTCCATGGAGTACCTGCAGGGCCGCGCGCTCACCAACGCC GTCGGCAACCTCGGCATCACCGGCGCCTACGCGGAGGCCGTGAAGAAGTTCGGGTACGAG CTCGAGGCCCTCGTCGGGCAGGAAAAAGATGCAGCTCTGGGAAATGGTGGCTTGGGTAGG CTCGCATCTTGCTTTTTGGATTCGATGGCAACACTAAATTTGCCTGCTTGGGGATATGGT CTGCGGTACCGATATGGTCTATTCAAACAATGCATCACCAAGGAAGGCCAGGAAGAAATT GCTGAAGATTGGCTTGAGAAGTTCAGCCCATGGGAAATTGTCAGGCATGACATTGTATAC CCAATCAGATTTTTTGGCCACGTTGAGATTTTGCCAGATGGATCTCGTAAATGGGTGGGG GGAGAAGTTCTCAATGCTTTAGCATATGATGTGCCAATTCCTGGGTACAAGACAAAAAAT GCAATCAGTCTTCGTCTTTGGGACGCAAAAGCTAGTGCGGAGGATTTTAACTTATTTCAA TTCAATGATGGCCAGTATGAGTCCGCTGCTCAACTTCATGCTAGGGCACAACAGATATGT GCCGTTCTCTATCCCGGTGATGCTACAGAAGAAGGAAAGCTTCTCAGACTGAAGCAACAG TATTTCCTTTGCAGTGCATCGCTTCAGGATATTTTTTTCAGGTTTAAAGAAAGGAAAGCT GACAGAGTTTCTGGGAAATGGAGTGAGTTCCCTGCAAAAGTTGCTGTTCAATTGAATGAC ACTCACCCAACTCTTGCGATTCCTGAGCTGATGAGGCTACTCATGGATGTGGAGGGACTT GGTTGGGATGAAGCATGGGATATCACAAATAAAACAATTGCCTACACCAATCACACTGTT CTTCCTGAAGCCCTTGAGAAATGGTCGCAGATTGTAATGAGGAAATTACTTCCACGACAC ATGGAAATTATCGAGGAAATTGACAAGCGGTTCAAGGAAATGGTAATCTCCACCCGGAAG GAAATGGAGGGAAAGATTGACTCCATGAGAATCTTAGACAACTCAAATCCTCAGAAGCCA GTAGTGCGCATGGCAAATTTGTGCGTAGTGTCTGCCCATACGGTGAATGGAGTGGCTGAG TTACACAGCAACATTTTGAAGGAAGAGCTTTTTGCAGACTATCTCTCTATATGGCCCAAC AAATTTCAGAACAAAACAAATGGAATTACACCTCGTAGATGGCTCCGTTTCTGCAACCCA GAGTTGAGTGAAATAGTAACAAAATGGCTAAAAACAGATCAGTGGACAAGCAACCTTGAT CTTCTTACCGGACTTCGGAAATTTGCAGATGATGAAAAGCTTCATGCTGAGTGGGCATCA GCTAAGTTGGCTAGCAAAAAACGCCTAGCCAAGCATGTGTTGGATGTGACAGGTGTTACA ATCGACCCAAATAGCCTTTTTGATATACAAATTAAACGCATTCATGAGTACAAGAGACAG CTGCTAAACATTTTGGGAGCTGTTTACAGATACAAGAAGTTAAAGGGAATGAGTGCAGAG GAGAGACAAAAAGTTACGCCACGCACTGTCATGATAGGGGGAAAAGCATTCGCGACTTAC ACCAATGCCAAAAGAATAGTAAAATTGGTAAATGATGTTGGTGCTGTGGTGAACAATGAT CCTGATGTTAATAAATACCTAAAGGTGGTGTTCATTCCCAACTACAATGTATCTGTGGCC GAGGTGCTCATTCCTGGGAGTGAACTGTCACAGCACATCAGTACCGCAGGCATGGAAGCA AGTGGAACGAGTAATATGAAATTCTCTCTGAATGGTTGTGTTATCATTGGTACTCTTGAT GGAGCTAATGTTGAGATAAGAGAGGAAGTGGGACAAGAAAATTTCTTCCTTTTTGGTGCC AAGGCAGATCAAGTTGCTGGGCTGAGGAAGGATAGAGAGAATGGCTTGTTCAAACCAGAC CCACGTTTTGAAGAAGCCAAGCAGCTTATAAGGAGTGGTGCTTTTGGCACCTATGACTAT GCTCCCCTCTTGGATTCTCTTGAAGGAAATTCTGGATTTGGTCGTGGTGATTATTTCCTC GTTGGCTATGATTTCCCAAGCTATATTGATGCACAGGCCCAGGTTGATGAAGCCTACAAG GATAAGAAAAAATGGATCAAGATGTCTATACTGAACACAGCTGGAAGTGGCAAATTCAGC AGCGACCGTACTATCGCTCAGTATGCAAAGGAAATATGGGGCATTACTGCTAGCCCTGTC TCCTAA

Peptide Sequence

PEP ID	Os01t0851700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:36670321:36676478:-1 gene:Os01g0851700 transcript:Os01t0851700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Starch phosphorylase 2, plastidial starch phosphorylase2, plastidial starch phosphorylase 2 description:Similar to Cytosolic starch phosphorylase (Fragment). (Os01t0851700-01)
Sequence	MPESNGAACGAAEKVKPAASPASEEPAAIAGNISFHAQYSPHFSPLAFGPEQAFYSTAES VRDHLVQRWNETYLHFHKTDPKQTYYLSMEYLQGRALTNAVGNLGITGAYAEAVKKFGYE LEALVGQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQCITKEGQEEI AEDWLEKFSPWEIVRHDIVYPIRFFGHVEILPDGSRKWVGGEVLNALAYDVPIPGYKTKN AISLRLWDAKASAEDFNLFQFNDGQYESAAQLHARAQQICAVLYPGDATEEGKLLRLKQQ YFLCSASLQDIFFRFKERKADRVSGKWSEFPAKVAVQLNDTHPTLAIPELMRLLMDVEGL GWDEAWDITNKTIAYTNHTVLPEALEKWSQIVMRKLLPRHMEIIEEIDKRFKEMVISTRK EMEGKIDSMRILDNSNPQKPVVRMANLCVVSAHTVNGVAELHSNILKEELFADYLSIWPN KFQNKTNGITPRRWLRFCNPELSEIVTKWLKTDQWTSNLDLLTGLRKFADDEKLHAEWAS AKLASKKRLAKHVLDVTGVTIDPNSLFDIQIKRIHEYKRQLLNILGAVYRYKKLKGMSAE ERQKVTPRTVMIGGKAFATYTNAKRIVKLVNDVGAVVNNDPDVNKYLKVVFIPNYNVSVA EVLIPGSELSQHISTAGMEASGTSNMKFSLNGCVIIGTLDGANVEIREEVGQENFFLFGA KADQVAGLRKDRENGLFKPDPRFEEAKQLIRSGAFGTYDYAPLLDSLEGNSGFGRGDYFL VGYDFPSYIDAQAQVDEAYKDKKKWIKMSILNTAGSGKFSSDRTIAQYAKEIWGITASPV S

Transcript Sequence

Transcript ID	Os01t0851700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:36670321:36676478:-1 gene:Os01g0851700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Starch phosphorylase 2, plastidial starch phosphorylase2, plastidial starch phosphorylase 2 description:Similar to Cytosolic starch phosphorylase (Fragment). (Os01t0851700-01)
Sequence	CGTTCCGTTCCGTTCCATTCCATTCGGTGCCTCTGCCCGGAGCCGAACTCCGACGCCTTA TCGACTCACTCACCAAGTGCTCGACGCAATTCCCCACCGGGGAGCCCGCCCGCCATGCCG GAGAGCAACGGCGCCGCGTGCGGCGCGGCGGAGAAGGTGAAGCCGGCGGCCAGCCCCGCG TCGGAGGAGCCGGCCGCCATCGCCGGTAACATCTCCTTCCACGCGCAGTACAGCCCCCAC TTCTCGCCGCTCGCGTTCGGCCCCGAGCAGGCCTTCTACTCCACCGCCGAGAGCGTCCGC GATCACCTCGTCCAGAGATGGAACGAGACGTACTTGCATTTCCACAAGACGGATCCGAAG CAGACGTACTACCTCTCCATGGAGTACCTGCAGGGCCGCGCGCTCACCAACGCCGTCGGC AACCTCGGCATCACCGGCGCCTACGCGGAGGCCGTGAAGAAGTTCGGGTACGAGCTCGAG GCCCTCGTCGGGCAGGAAAAAGATGCAGCTCTGGGAAATGGTGGCTTGGGTAGGCTCGCA TCTTGCTTTTTGGATTCGATGGCAACACTAAATTTGCCTGCTTGGGGATATGGTCTGCGG TACCGATATGGTCTATTCAAACAATGCATCACCAAGGAAGGCCAGGAAGAAATTGCTGAA GATTGGCTTGAGAAGTTCAGCCCATGGGAAATTGTCAGGCATGACATTGTATACCCAATC AGATTTTTTGGCCACGTTGAGATTTTGCCAGATGGATCTCGTAAATGGGTGGGGGGAGAA GTTCTCAATGCTTTAGCATATGATGTGCCAATTCCTGGGTACAAGACAAAAAATGCAATC AGTCTTCGTCTTTGGGACGCAAAAGCTAGTGCGGAGGATTTTAACTTATTTCAATTCAAT GATGGCCAGTATGAGTCCGCTGCTCAACTTCATGCTAGGGCACAACAGATATGTGCCGTT CTCTATCCCGGTGATGCTACAGAAGAAGGAAAGCTTCTCAGACTGAAGCAACAGTATTTC CTTTGCAGTGCATCGCTTCAGGATATTTTTTTCAGGTTTAAAGAAAGGAAAGCTGACAGA GTTTCTGGGAAATGGAGTGAGTTCCCTGCAAAAGTTGCTGTTCAATTGAATGACACTCAC CCAACTCTTGCGATTCCTGAGCTGATGAGGCTACTCATGGATGTGGAGGGACTTGGTTGG GATGAAGCATGGGATATCACAAATAAAACAATTGCCTACACCAATCACACTGTTCTTCCT GAAGCCCTTGAGAAATGGTCGCAGATTGTAATGAGGAAATTACTTCCACGACACATGGAA ATTATCGAGGAAATTGACAAGCGGTTCAAGGAAATGGTAATCTCCACCCGGAAGGAAATG GAGGGAAAGATTGACTCCATGAGAATCTTAGACAACTCAAATCCTCAGAAGCCAGTAGTG CGCATGGCAAATTTGTGCGTAGTGTCTGCCCATACGGTGAATGGAGTGGCTGAGTTACAC AGCAACATTTTGAAGGAAGAGCTTTTTGCAGACTATCTCTCTATATGGCCCAACAAATTT CAGAACAAAACAAATGGAATTACACCTCGTAGATGGCTCCGTTTCTGCAACCCAGAGTTG AGTGAAATAGTAACAAAATGGCTAAAAACAGATCAGTGGACAAGCAACCTTGATCTTCTT ACCGGACTTCGGAAATTTGCAGATGATGAAAAGCTTCATGCTGAGTGGGCATCAGCTAAG TTGGCTAGCAAAAAACGCCTAGCCAAGCATGTGTTGGATGTGACAGGTGTTACAATCGAC CCAAATAGCCTTTTTGATATACAAATTAAACGCATTCATGAGTACAAGAGACAGCTGCTA AACATTTTGGGAGCTGTTTACAGATACAAGAAGTTAAAGGGAATGAGTGCAGAGGAGAGA CAAAAAGTTACGCCACGCACTGTCATGATAGGGGGAAAAGCATTCGCGACTTACACCAAT GCCAAAAGAATAGTAAAATTGGTAAATGATGTTGGTGCTGTGGTGAACAATGATCCTGAT GTTAATAAATACCTAAAGGTGGTGTTCATTCCCAACTACAATGTATCTGTGGCCGAGGTG CTCATTCCTGGGAGTGAACTGTCACAGCACATCAGTACCGCAGGCATGGAAGCAAGTGGA ACGAGTAATATGAAATTCTCTCTGAATGGTTGTGTTATCATTGGTACTCTTGATGGAGCT AATGTTGAGATAAGAGAGGAAGTGGGACAAGAAAATTTCTTCCTTTTTGGTGCCAAGGCA GATCAAGTTGCTGGGCTGAGGAAGGATAGAGAGAATGGCTTGTTCAAACCAGACCCACGT TTTGAAGAAGCCAAGCAGCTTATAAGGAGTGGTGCTTTTGGCACCTATGACTATGCTCCC CTCTTGGATTCTCTTGAAGGAAATTCTGGATTTGGTCGTGGTGATTATTTCCTCGTTGGC TATGATTTCCCAAGCTATATTGATGCACAGGCCCAGGTTGATGAAGCCTACAAGGATAAG AAAAAATGGATCAAGATGTCTATACTGAACACAGCTGGAAGTGGCAAATTCAGCAGCGAC CGTACTATCGCTCAGTATGCAAAGGAAATATGGGGCATTACTGCTAGCCCTGTCTCCTAA ATACGAGATGCACCAAGACGAAGCTCATCAAGATGGACGCTATATTATGCAATAATAAGG ATTAGATAACGATCCACGGTGAATAACACTTGCTTCCGTTGTAAGCTGGAGCGCGGAGAA CCCAGCAACGAGTGAAGCTGGCACTTTGAAGTGCGCTGGAAAACGCAACCCTCTTTTGCT TTATGCTAATATATATGTATTTGGTCTGGAACAAGGTACTTGTGAGATGTACTGGATGGA ATCTTCCGTCACAAAATAAAACGATTCAAATTTTTGGTT