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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0851300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:36652530:36654649:-1 gene:Os01g0851300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon family protein. (Os01t0851300-01)
Sequence

ATGGATGCCTCTGACCAAGGTTGCCGGCTGCTCGGCGCCCAGAGATCGCTGCACGGCCTC
CTCGGCGGCGGCGCCATGGCGGATGTGGTGCTGTGGAGGAGGAAGGAGGTGGCCGGCTGG
TCGCTGGCGGCGGTGGCGGCGTCCTGGGTCCTCTTCTATTGCTTGCCTGGCTACACGCTG
CTCTCCTTCGTGTCCAGCGTGCTCATGATCGTGCTCGTCGTCCTCTTCGTCTGGGCCAAG
GCCGCGCGGCTGCTCAACAGGCCACCTCCACCTGTTCCACTGATCAAAATATCTGAAGAC
TCAATGAGCAAAGCAGCAGCTGCAGTGGGTAACATCCTACATAAGGCACTACAGGGTTTT
GAAAACATTGCACACGGAAAGGACTCCAGTCTCTTTTACAAGATGGTTTCAGTATTACTG
CTGATCTCCATAGTTGGCCGTGTGACTGATCTCATTACTTTGGTATATGCATGCCTTGTT
CTTGCTCTCACCATCCCTGCATTGGTGGATAAATATGAAGAAAACATTGCCAAGTTCTTA
AATCAAGCGTCAGCAAATATTCAGGCATGTGGACAAGCATGGAAAGCATATAAATCTAAG
ATTAAGAACTGA

Peptide Sequence

PEP ID

Os01t0851300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:36652530:36654649:-1 gene:Os01g0851300 transcript:Os01t0851300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon family protein. (Os01t0851300-01)
Sequence

MDASDQGCRLLGAQRSLHGLLGGGAMADVVLWRRKEVAGWSLAAVAASWVLFYCLPGYTL
LSFVSSVLMIVLVVLFVWAKAARLLNRPPPPVPLIKISEDSMSKAAAAVGNILHKALQGF
ENIAHGKDSSLFYKMVSVLLLISIVGRVTDLITLVYACLVLALTIPALVDKYEENIAKFL
NQASANIQACGQAWKAYKSKIKN

Transcript Sequence

Transcript ID

Os01t0851300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:36652530:36654649:-1 gene:Os01g0851300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon family protein. (Os01t0851300-01)
Sequence

ACTTCTGCATCACGCCGCTGTTCTTGCCGTGCGCTTTTCTCCCCTTTCCACCAGCTGAAC
TCCCGATCGGTCTCCCCCGATCAGAGAGATCCATTCATCCACCCAGCAAGGCAATGGATG
CCTCTGACCAAGGTTGCCGGCTGCTCGGCGCCCAGAGATCGCTGCACGGCCTCCTCGGCG
GCGGCGCCATGGCGGATGTGGTGCTGTGGAGGAGGAAGGAGGTGGCCGGCTGGTCGCTGG
CGGCGGTGGCGGCGTCCTGGGTCCTCTTCTATTGCTTGCCTGGCTACACGCTGCTCTCCT
TCGTGTCCAGCGTGCTCATGATCGTGCTCGTCGTCCTCTTCGTCTGGGCCAAGGCCGCGC
GGCTGCTCAACAGGCCACCTCCACCTGTTCCACTGATCAAAATATCTGAAGACTCAATGA
GCAAAGCAGCAGCTGCAGTGGGTAACATCCTACATAAGGCACTACAGGGTTTTGAAAACA
TTGCACACGGAAAGGACTCCAGTCTCTTTTACAAGATGGTTTCAGTATTACTGCTGATCT
CCATAGTTGGCCGTGTGACTGATCTCATTACTTTGGTATATGCATGCCTTGTTCTTGCTC
TCACCATCCCTGCATTGGTGGATAAATATGAAGAAAACATTGCCAAGTTCTTAAATCAAG
CGTCAGCAAATATTCAGGCATGTGGACAAGCATGGAAAGCATATAAATCTAAGATTAAGA
ACTGATCTTGGAAAACAATAAACTGTTTTGATCTCATTGTACAGTTGTCAACAAAATTTT
GCCTTGTATACTTGTCTTCCTAGAGTTAAACATGTTGACATCCGTCTT