Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0850200-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:36597719:36600524:-1 gene:Os01g0850200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPV-3, RING-V protein 3 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0850200-00)
Sequence

ATGGTGAACGACGGCGAGCAGGCGTTGACGATCGCTCCCGCCGCCGCCGCGGATTCTAGC
GCGGAGCCGGCCCGCCACGTCGGCGGCGGCGGAGGAGGAGGAGGCGGGCTTGCGGAGGAG
AGCTCGGATGAGGATAAGGGGAGCCAGCGCTTCTCCGACGCGGAGGACCACTCATGGCGG
TCGCACTCGCGCCAGGGCTCCGTTGCCCTCGAGGACTTCATCTCGACGTGCGCGTCCGTC
CGCTCCGGCGCCGGGGACGCGGACGCGGACGGCGGCGGCAGGAGGAAGTCGTGCGTGTCG
GAGTGCTCGCTGGGCGACGTGGACCTCGAGGCCGGGCTGGCCGAGATCAGCAAGGCCAGC
CCGGACACGGCCGAGAGGAATTGCCGCATCTGCCACCTCGGCCTCGAGAGCGCCGCCGCC
GAGTCCGGCTCCGGCATGTTCCTCGGCTGCTCCTGCAAGGACGACCTCTCCTGCGCCCAT
AAGCAGTGCGCCGAGACCTGGTTCAAGATCAGGGGAAACAGGATCTGCGAAATCTGTGGC
TCAACTGCATGCAATGTGGTAGGTATCGGTGATGCCGAGTTCATCGAGCAGTGGAATGAA
TCAAGTAACACCGCGGCTTCGCAAATGCCTGCCAGTGAACCTCGGAGGTTTTGGCAAGGC
CACCGGTTTCTCAACTTCCTTCTTGCTTGCATGGTGTTTGCTTTTGTTATATCTTGGCTC
TTTCACTTCAATGTCCCTGGATGA

Peptide Sequence

PEP ID

Os01t0850200-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:36597719:36600524:-1 gene:Os01g0850200 transcript:Os01t0850200-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPV-3, RING-V protein 3 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0850200-00)
Sequence

MVNDGEQALTIAPAAAADSSAEPARHVGGGGGGGGGLAEESSDEDKGSQRFSDAEDHSWR
SHSRQGSVALEDFISTCASVRSGAGDADADGGGRRKSCVSECSLGDVDLEAGLAEISKAS
PDTAERNCRICHLGLESAAAESGSGMFLGCSCKDDLSCAHKQCAETWFKIRGNRICEICG
STACNVVGIGDAEFIEQWNESSNTAASQMPASEPRRFWQGHRFLNFLLACMVFAFVISWL
FHFNVPG

Transcript Sequence

Transcript ID

Os01t0850200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:36597719:36600524:-1 gene:Os01g0850200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPV-3, RING-V protein 3 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0850200-00)
Sequence

CTCTTCTCTTCCCCTTCGTCCCCGACAAAGCACCACAACTCCGCAAGTTTTCTCTTTTCT
TTTTTCCCCTTCTCTCTTTCGCCTACTCCTTGTTCAATCGATTCTTCCCAGCTACGCGAC
TCTTCCTCGCTTTCTCGCTTCTCTCTCTGCGCCACTGTGGATCAAGAAACAGCTTTAAAA
TCCAATCTTTTTTAGGCACCTGATGCCTCGTCGGTAGCAGTATATTTTCAATTCGTTATT
TTTTTAGAGCTTAGAATCTACTGGCAGCTTGGATTTTTCTTGGGTGGTTGCTCCCAGTGA
TCGGCCGCATTGCTTGCGTGGTGGCACACCGTCAGCTTTGGAGTAACCTGTAACTGCAAG
AGTGAGTTTGTTTGGCGTGAGCAATGGTGAACGACGGCGAGCAGGCGTTGACGATCGCTC
CCGCCGCCGCCGCGGATTCTAGCGCGGAGCCGGCCCGCCACGTCGGCGGCGGCGGAGGAG
GAGGAGGCGGGCTTGCGGAGGAGAGCTCGGATGAGGATAAGGGGAGCCAGCGCTTCTCCG
ACGCGGAGGACCACTCATGGCGGTCGCACTCGCGCCAGGGCTCCGTTGCCCTCGAGGACT
TCATCTCGACGTGCGCGTCCGTCCGCTCCGGCGCCGGGGACGCGGACGCGGACGGCGGCG
GCAGGAGGAAGTCGTGCGTGTCGGAGTGCTCGCTGGGCGACGTGGACCTCGAGGCCGGGC
TGGCCGAGATCAGCAAGGCCAGCCCGGACACGGCCGAGAGGAATTGCCGCATCTGCCACC
TCGGCCTCGAGAGCGCCGCCGCCGAGTCCGGCTCCGGCATGTTCCTCGGCTGCTCCTGCA
AGGACGACCTCTCCTGCGCCCATAAGCAGTGCGCCGAGACCTGGTTCAAGATCAGGGGAA
ACAGGATCTGCGAAATCTGTGGCTCAACTGCATGCAATGTGGTAGGTATCGGTGATGCCG
AGTTCATCGAGCAGTGGAATGAATCAAGTAACACCGCGGCTTCGCAAATGCCTGCCAGTG
AACCTCGGAGGTTTTGGCAAGGCCACCGGTTTCTCAACTTCCTTCTTGCTTGCATGGTGT
TTGCTTTTGTTATATCTTGGCTCTTTCACTTCAATGTCCCTGGATGAGTTTTCCAAAAGA
AAATGTCGTAATAAAATCTTCAAAGCCATTGTTACAAGTAAA