Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0848300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:36438950:36442944:-1 gene:Os01g0848300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0848300-01)
Sequence	ATGTCCGCCCCCGCGCCCGCCTCGCCGCCCGCCTCCCTCTTCCACCTCTCCCGCCCGGCG GCCGGGCCCAGGGCGCGCCCGAGGGTGTCGCGGTCCAGGTGCGTGGCGTCGCTCGCGTCC CAGCCGCCGACGCCGCCGCCCGCGAACGCGAACCACCTCGTGCAGACGCTGTGCGCCAGC GGCCGCCTCGCGCGCGCCGCGGCGCTCCTCCAGGGCCTCCCCGCGCCCACGCAGCGCACC TACAAGTCGGTCCTCCTCGCCGCCGCGCGGGCCGGGGACGCGGCGCTCGCCGCGGCCGTG CACCGGCGGCTCAAGGCGGACCCCGTCTTCCGCTCCGACCCGTTCCTCTCCACCCGCCTC ATCGACGCCTACGCGTCGCTCGGCGAGCTCCCGGCCGCACGCCAGGTGTTCGACGAGGCG CCCGTGAAGAGCATCTTCGTGTGGAACGCGCTGCTCAAGGCGCTCGCGCTCGCCGACCAT GGCGAGGAGGCCCTCGCGCGCCTGGCTGACATGGGGCGGCTCCGCGTTCCGGTCGACAGC TACAGCTACGCGCACGGACTCAAGGCCTGCATTGCCGCATCAACGTCTCATGTGCCGGCG TCGGCCCTCGTACGCGAGATACATGCGCATGCTGTCCGTCGTGGCTACGGATTGCACACA CATGTCGCCACCACTCTTATTGACTGCTACGCAAAGCTTGGAATCGTCAGCTATGCTGAG AGTGTGTTTGCTACAATGCCAGAGAGGAATGTTGTGTCGTGGACTGCCATGATTGGGTGC TATGCCAAGAACGAGAGACCAGGTGATGCCATTTTGCTATTCCAGGAGATGGTGGCTTCT GATGAAGACCTTGTACCCAATTCAGTCACAATAGTATGCATCTTGCATGCTTTTGCTGGA GTTAACGCTCTCGGGCAGGGCAAATTGTTGCATGCGTATATCCTCCGGAGGGGTTTTGAC TCACTTGTTTCAGTTCTGAACGCATTGATGGCGATGTACATGAAATGTGGATGTCTTGAA GCTGGGCGGCATATCTTTGATTTAATAGGACACCGGAAGGATGTTGTGTCATGGAATACA CTCATATCTGGATATGGGATGCATGGATTTGGCCATGAAGCGGTTCAGGTGTTTGAAGAC ATGACCCAAATGGGCGTTTCACCCAATATCATCACATTTATCAGTGTCCTTGGGGCTTGT AGCCATGCTGGACTCGTGGATGAGGGGAAGAGGCTGTTTGAGTCGATGGTGGATTATAAT GTCACCCCTCGTGCAGAGCACTATGCCTGCATGGTAGATCTCCTTGGTCGTGCCGGGCAT TTGGACGAAGCCGTTGAGCTCATACAGGGAATGCACATTAGGCCGAGTCCTCAAGTGTGG GGCTCACTTCTTGGTGCTTGCAGGATTCATCGCCATGTGGAGTATGCGGAGATGGCTTGC TCACAACTCTTTGATCTTGAGCCTAGAAATGCTGGAAATTATGTACTCCTTGCTGATATC TATGCTCGAGCTAAGTTGCATAGTGAAGTTGGTGTGCTAAAGGATCTTCTTGAGGAGCAT GCGTTGGAGAAGGTGCCTGGATGCAGCTGGATAGAGGTGAAGAAGAGATTGCACATGTTT GTCTCTGTGGACAACAAGAATCCTCAGATTGAGGAGCTCCAAGCTCTGATAGGTGAGTTT GTGACACAGATGAAGAATGATGGCTATGTGCCTGACACAGGAGCTGTTTTGTATGATATT GAAGAAGAAGAGAAGGAGAAGATTTTGCTTGGGCACAGTGAGAAGCTAGCTGTTGCCTTC GGGCTTATCAACACTGGCAGGGGAGAAGTCATCAGGATCACCAAGAACCTCAGGCTATGT GAGGACTGTCATTCCGTCACCAAGTTCATCTCCAAATATGCAGAGCGAGAGATTATTGTG AGGGATGTGAATCGGTTTCACCACTTCAGGGATGGAATTTGTTCATGTGGGGATTATTGG TGA

Peptide Sequence

PEP ID	Os01t0848300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:36438950:36442944:-1 gene:Os01g0848300 transcript:Os01t0848300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0848300-01)
Sequence	MSAPAPASPPASLFHLSRPAAGPRARPRVSRSRCVASLASQPPTPPPANANHLVQTLCAS GRLARAAALLQGLPAPTQRTYKSVLLAAARAGDAALAAAVHRRLKADPVFRSDPFLSTRL IDAYASLGELPAARQVFDEAPVKSIFVWNALLKALALADHGEEALARLADMGRLRVPVDS YSYAHGLKACIAASTSHVPASALVREIHAHAVRRGYGLHTHVATTLIDCYAKLGIVSYAE SVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQEMVASDEDLVPNSVTIVCILHAFAG VNALGQGKLLHAYILRRGFDSLVSVLNALMAMYMKCGCLEAGRHIFDLIGHRKDVVSWNT LISGYGMHGFGHEAVQVFEDMTQMGVSPNIITFISVLGACSHAGLVDEGKRLFESMVDYN VTPRAEHYACMVDLLGRAGHLDEAVELIQGMHIRPSPQVWGSLLGACRIHRHVEYAEMAC SQLFDLEPRNAGNYVLLADIYARAKLHSEVGVLKDLLEEHALEKVPGCSWIEVKKRLHMF VSVDNKNPQIEELQALIGEFVTQMKNDGYVPDTGAVLYDIEEEEKEKILLGHSEKLAVAF GLINTGRGEVIRITKNLRLCEDCHSVTKFISKYAEREIIVRDVNRFHHFRDGICSCGDYW

Transcript Sequence

Transcript ID	Os01t0848300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:36438950:36442944:-1 gene:Os01g0848300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0848300-01)
Sequence	GGCGCGCCTCCGCCTCTCTCCCCATCCGCTGCCCGAACTCCGACCACACCGCACCGGAAA AATATCCCGAACACGGTGAAGCCACTCGCGCCGCGCACGCTCCGCCTCCGCCTCCTCCAC CCCATGTCCGCCCCCGCGCCCGCCTCGCCGCCCGCCTCCCTCTTCCACCTCTCCCGCCCG GCGGCCGGGCCCAGGGCGCGCCCGAGGGTGTCGCGGTCCAGGTGCGTGGCGTCGCTCGCG TCCCAGCCGCCGACGCCGCCGCCCGCGAACGCGAACCACCTCGTGCAGACGCTGTGCGCC AGCGGCCGCCTCGCGCGCGCCGCGGCGCTCCTCCAGGGCCTCCCCGCGCCCACGCAGCGC ACCTACAAGTCGGTCCTCCTCGCCGCCGCGCGGGCCGGGGACGCGGCGCTCGCCGCGGCC GTGCACCGGCGGCTCAAGGCGGACCCCGTCTTCCGCTCCGACCCGTTCCTCTCCACCCGC CTCATCGACGCCTACGCGTCGCTCGGCGAGCTCCCGGCCGCACGCCAGGTGTTCGACGAG GCGCCCGTGAAGAGCATCTTCGTGTGGAACGCGCTGCTCAAGGCGCTCGCGCTCGCCGAC CATGGCGAGGAGGCCCTCGCGCGCCTGGCTGACATGGGGCGGCTCCGCGTTCCGGTCGAC AGCTACAGCTACGCGCACGGACTCAAGGCCTGCATTGCCGCATCAACGTCTCATGTGCCG GCGTCGGCCCTCGTACGCGAGATACATGCGCATGCTGTCCGTCGTGGCTACGGATTGCAC ACACATGTCGCCACCACTCTTATTGACTGCTACGCAAAGCTTGGAATCGTCAGCTATGCT GAGAGTGTGTTTGCTACAATGCCAGAGAGGAATGTTGTGTCGTGGACTGCCATGATTGGG TGCTATGCCAAGAACGAGAGACCAGGTGATGCCATTTTGCTATTCCAGGAGATGGTGGCT TCTGATGAAGACCTTGTACCCAATTCAGTCACAATAGTATGCATCTTGCATGCTTTTGCT GGAGTTAACGCTCTCGGGCAGGGCAAATTGTTGCATGCGTATATCCTCCGGAGGGGTTTT GACTCACTTGTTTCAGTTCTGAACGCATTGATGGCGATGTACATGAAATGTGGATGTCTT GAAGCTGGGCGGCATATCTTTGATTTAATAGGACACCGGAAGGATGTTGTGTCATGGAAT ACACTCATATCTGGATATGGGATGCATGGATTTGGCCATGAAGCGGTTCAGGTGTTTGAA GACATGACCCAAATGGGCGTTTCACCCAATATCATCACATTTATCAGTGTCCTTGGGGCT TGTAGCCATGCTGGACTCGTGGATGAGGGGAAGAGGCTGTTTGAGTCGATGGTGGATTAT AATGTCACCCCTCGTGCAGAGCACTATGCCTGCATGGTAGATCTCCTTGGTCGTGCCGGG CATTTGGACGAAGCCGTTGAGCTCATACAGGGAATGCACATTAGGCCGAGTCCTCAAGTG TGGGGCTCACTTCTTGGTGCTTGCAGGATTCATCGCCATGTGGAGTATGCGGAGATGGCT TGCTCACAACTCTTTGATCTTGAGCCTAGAAATGCTGGAAATTATGTACTCCTTGCTGAT ATCTATGCTCGAGCTAAGTTGCATAGTGAAGTTGGTGTGCTAAAGGATCTTCTTGAGGAG CATGCGTTGGAGAAGGTGCCTGGATGCAGCTGGATAGAGGTGAAGAAGAGATTGCACATG TTTGTCTCTGTGGACAACAAGAATCCTCAGATTGAGGAGCTCCAAGCTCTGATAGGTGAG TTTGTGACACAGATGAAGAATGATGGCTATGTGCCTGACACAGGAGCTGTTTTGTATGAT ATTGAAGAAGAAGAGAAGGAGAAGATTTTGCTTGGGCACAGTGAGAAGCTAGCTGTTGCC TTCGGGCTTATCAACACTGGCAGGGGAGAAGTCATCAGGATCACCAAGAACCTCAGGCTA TGTGAGGACTGTCATTCCGTCACCAAGTTCATCTCCAAATATGCAGAGCGAGAGATTATT GTGAGGGATGTGAATCGGTTTCACCACTTCAGGGATGGAATTTGTTCATGTGGGGATTAT TGGTGAAGATGCTGCGGACTCTATTAATGTTTTTTGGGAGCTTTACTGATTTATACAGAA TAACCACTGAAGACGTAGGAATTGTTGTATAGCCTAACATATTGATTAGACTAGCCATCA TGACTCAGTCTTTCAGGAGGTACCTCAAAAGATTGCTGAGTTGTTTGTTTGGAGAGAATT GGAATCTCTGCCAGACAATTTTGATACATTTGTGATGGATCCCTGTTTAACACATCAGTA GTAGTAACGGTATCCTGACACATTTGGAATGGTGATGGTACTGTGGATACCAGACATGGA TGTAATATTGTAATATCCCCACCTAATGTTGACACTGATACGAGAGTATCTACCATCTGT CATGGTTAGAGGCCCTGAGCTGGGAGATTGATATTCATCTCTGTAATTTGTTATGCAATA CTGCAATGGGATGCATTACGAATAGCTGCTAGAATTCTGAACTTCTTAAGTTGTGAAATG CTGGGAATTTTCGTCCGAGACTTATTGGCGATTTCTAATATAACTGTCTTTATCTAAACA GATCAGATACGGGATGGTTCAGTTGAGGCTCCAGTCTGATGATTAGGCTTCTGCGATGTG CATGTCTCCGGCTTCAGCAGCAGACCGCCCTACACCAGCCAGATCTTTATCATGGAAAGC ACCAGCGTCGCCACGCTCAGAGAAGCAGCTCTCAAGGAGGAGCACGGTGAGCGTCTGCAA AAAATTGCTCTACAACAGCTCCTTCACAAGCCACTTCACCTGAAACCAGAGATGTTGAAG GTTAGTAATCAGTAGTATGCCATCTTTCAAAATAAAAGAACACTACCTACCTCACTGCAA AGGGAGCTCCCTGTGGGTGTAAACAACTCCCTTGTCGCCGTTCACTACTTGTCCACTTCC TCGTAAAATGCTATATATAACGAAAAACCAATGCACACATATTACATGAAGATACTAGTA GTAAATACAAAACTACTGATTTTTTCCATCTGTTTAGTATGATAATAACATTTAGCTGAA AAAATATTGTATGATGATAAAATGCTAGATGCAGAAAACATCTTGCACAATAGTATTGTC CTTAATGTTTGGACATGAAGACAATATGGCATGATAACCCTACCATCGAGTTGTTAGGAG TCCATCAACGCCAACAGGCCCCCGAGCATGTATGCGCCCTGTGCTTATGCCAACCTATAT TTGATAAAGGAAAGAAAATAGGGGACTGAATGAAACGCTGACCATTCAATAGTAACAACA TATATTTTCGATAACTATTTTTTTTTGATAACTAGTTAACGAAAATGTCCAAGTTATAAA GTGATACAAATTTAAAGGACATACCTCAGCACCTAGACCAAAGCGAGCCCCATCACAGAA CCGTGTGCTTGCATTATGGAATACCGCAGCACTGTTGCAATTTATAGAAGAATAACTCCA TTAATTAAGGTATGTACTAAAAGCGGCAAACATAATAGTTGTGCAAAGGAAATTAGTTAA ACACCTATCAACTTGCTGTAGAAAAGTCTCTGCTGCCTTTCCATCAGTAGTGATAATGCA ATCTGTGTGTGCACTGAAATGAACATATATTTAACACAATCAAGTTTAGT