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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0847900-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:36420027:36422784:-1 gene:Os01g0847900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prenylated rab acceptor PRA1 family protein. (Os01t0847900-01);Prenylated rab acceptor PRA1 family protein. (Os01t0847900-02)
Sequence

ATGGACTGGAGCTCCGTGACTGCGGAGGATCTGGTGGACGCGCTGCGGGAGGTGGACTGG
TCGACGCCGCCGCGCCCCGTCTCCGAGTTCTTCTCCCGCTTCACCGCCCCGCGATCCTAC
TCCAAGTGGACCAGCCGCCTCAAGTGCAACCTCTACTACTACAGGACGAACTACTTCATC
TTGATCATGTTCATTCTTGGGATGGGCTTTCTCCGGAAACCAGTTTCCATCCTTGCAGCT
TTTTCAACAGGCCTCAGCATTGCATTTCTCAATGACAGTTTTGCAGTTACATTCAATGAG
AAAGTCACAAGGACAGTCAGACAATTTTCACCACATTTAGCAGCAAAGATGAGGCCACCC
TTAAGACCTGTCATTCGTGGCCGACCAAGCTCAAAAAGATCAATTCATATTTGTGGCCGG
CCTCGATGGGTTTTTGTTGTATTATTTTCTGTCGTAAGCTGCTTCCTCTGGATGACCTCA
TGTAGTCTCCTTACGGTTCTGTGGGCACTAATTGTTGGTCTGCTTGCAACCTTGCTTCAC
GCCAGTTTCAGAACACCTAATCTGAAAGCACGCCTGAACACATTCAGGGAGGAATTTCGA
GCAGTATGGCGGAATTATAGCGAGTTTTAA

Peptide Sequence

PEP ID

Os01t0847900-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:36420027:36422784:-1 gene:Os01g0847900 transcript:Os01t0847900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prenylated rab acceptor PRA1 family protein. (Os01t0847900-01);Prenylated rab acceptor PRA1 family protein. (Os01t0847900-02)
Sequence

MDWSSVTAEDLVDALREVDWSTPPRPVSEFFSRFTAPRSYSKWTSRLKCNLYYYRTNYFI
LIMFILGMGFLRKPVSILAAFSTGLSIAFLNDSFAVTFNEKVTRTVRQFSPHLAAKMRPP
LRPVIRGRPSSKRSIHICGRPRWVFVVLFSVVSCFLWMTSCSLLTVLWALIVGLLATLLH
ASFRTPNLKARLNTFREEFRAVWRNYSEF

Transcript Sequence

Transcript ID

Os01t0847900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:36420027:36422784:-1 gene:Os01g0847900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prenylated rab acceptor PRA1 family protein. (Os01t0847900-01);Prenylated rab acceptor PRA1 family protein. (Os01t0847900-02)
Sequence

ATCTAGAAGCGTCGCCGCCGACTCGCCATCTCCTCTCTAGGTCACCGGATTTCCTAGCCG
GCGGCGAGCTCGTCGGCTCAGGCGGCGGCGGCGGCGGCGATGGACTGGAGCTCCGTGACT
GCGGAGGATCTGGTGGACGCGCTGCGGGAGGTGGACTGGTCGACGCCGCCGCGCCCCGTC
TCCGAGTTCTTCTCCCGCTTCACCGCCCCGCGATCCTACTCCAAGTGGACCAGCCGCCTC
AAGTGCAACCTCTACTACTACAGGACGAACTACTTCATCTTGATCATGTTCATTCTTGGG
ATGGGCTTTCTCCGGAAACCAGTTTCCATCCTTGCAGCTTTTTCAACAGGCCTCAGCATT
GCATTTCTCAATGACAGTTTTGCAGTTACATTCAATGAGAAAGTCACAAGGACAGTCAGA
CAATTTTCACCACATTTAGCAGCAAAGATGAGGCCACCCTTAAGACCTGTCATTCGTGGC
CGACCAAGCTCAAAAAGATCAATTCATATTTGTGGCCGGCCTCGATGGGTTTTTGTTGTA
TTATTTTCTGTCGTAAGCTGCTTCCTCTGGATGACCTCATGTAGTCTCCTTACGGTTCTG
TGGGCACTAATTGTTGGTCTGCTTGCAACCTTGCTTCACGCCAGTTTCAGAACACCTAAT
CTGAAAGCACGCCTGAACACATTCAGGGAGGAATTTCGAGCAGTATGGCGGAATTATAGC
GAGTTTTAAACGCCCTTTTTGTCTACCCCATGTGAGTGCCTTCATCGCTGTCTTATGGTC
GAAAATTGAATCTAGCGAAGGGCTTAAAGTGCTACCTGTTCTGTCAGTGCATCATTGTGG
AGCTGCTTATTGGATGTCTCTGCGGTGGTGCAATGTAGAAGGACCTACTTCAGTGTGCTT
TCGAATTTCTTGATTTTCTCTGCAGATTTATGTGGTAAAAATGTTACCAAGTTCCATATC
TCTGCTGCCTCTTGCGACTCTTTAATTGTGGGAGATTAAAAATAGGCATGCTATTTTCTC
CAGTTTATGGATTTGGCTTTAGATTGTGGATTATTCTAGTCCCCCACCACATGGATCTCC
ATAGTTTTAGCTTCTGGTCCAAAACTTCTACTGTATTTTGATACATTGGGGAAGGAACAG
CATGTAAAAGAGACAGCTATCCTGAAGAGAAGAAAAAAGATATTGTTGTG