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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0847300-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:36399037:36401679:-1 gene:Os01g0847300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant domain containing protein. (Os01t0847300-01);Uncharacterised protein family UPF0497, trans-membrane plant domain containing protein. (Os01t0847300-02)
Sequence

ATGAGGGAGCTCGCCGGCAGCCCCGGGACGTGGAGCGGCCTCTCGCTGCGGGTGGGGCAG
CTCGTCTTCGCCGCCGCGTCCGTCTGCGCCACGGCCTCCGCCCTCGGCTTCGCCGCATAC
ACCGCCTTCTGTTACTTGATTGCATCGATGGGACTACAGGCACTCTGGAGCTTGGGACTT
GCTTGCCTTGATTGCTATGCCTTGAAATTCAAGAAAGATCTCCACAGTGCTGTTCTCCTG
AGCTTATTTGTTGTTGGCGACTGGGTAACAGCAATCCTGTCGTTCGCGGCATCATGCTCA
GCAGCAGGTGTAGTTGTTCTCTTCGATAGGGACATATACGCTTGCAGGAATCCCCAACTC
CCTTGTGGAAGATTTGAACTAGCCATAGCATGTGCTTTTCTTTCTTGGGCGTTTAGTGCC
ACATCTGCTCTCGTAATGTTTTGGCTCCTCGCTTCATTGTGA

Peptide Sequence

PEP ID

Os01t0847300-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:36399037:36401679:-1 gene:Os01g0847300 transcript:Os01t0847300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant domain containing protein. (Os01t0847300-01);Uncharacterised protein family UPF0497, trans-membrane plant domain containing protein. (Os01t0847300-02)
Sequence

MRELAGSPGTWSGLSLRVGQLVFAAASVCATASALGFAAYTAFCYLIASMGLQALWSLGL
ACLDCYALKFKKDLHSAVLLSLFVVGDWVTAILSFAASCSAAGVVVLFDRDIYACRNPQL
PCGRFELAIACAFLSWAFSATSALVMFWLLASL

Transcript Sequence

Transcript ID

Os01t0847300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:36399037:36401679:-1 gene:Os01g0847300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant domain containing protein. (Os01t0847300-01);Uncharacterised protein family UPF0497, trans-membrane plant domain containing protein. (Os01t0847300-02)
Sequence

AGCACGGAAACCGCCCACCAACTTTCGCCGCATGGCCGCCGGTCGCCGGGGCGGCGTCTG
AGAGGGCGCCCGCGCGGCGCGCGGCGCGGGTCGGAAGCGGAGGAGGGCGATCGAGATGAG
GGAGCTCGCCGGCAGCCCCGGGACGTGGAGCGGCCTCTCGCTGCGGGTGGGGCAGCTCGT
CTTCGCCGCCGCGTCCGTCTGCGCCACGGCCTCCGCCCTCGGCTTCGCCGCATACACCGC
CTTCTGTTACTTGATTGCATCGATGGGACTACAGGCACTCTGGAGCTTGGGACTTGCTTG
CCTTGATTGCTATGCCTTGAAATTCAAGAAAGATCTCCACAGTGCTGTTCTCCTGAGCTT
ATTTGTTGTTGGCGACTGGGTAACAGCAATCCTGTCGTTCGCGGCATCATGCTCAGCAGC
AGGTGTAGTTGTTCTCTTCGATAGGGACATATACGCTTGCAGGAATCCCCAACTCCCTTG
TGGAAGATTTGAACTAGCCATAGCATGTGCTTTTCTTTCTTGGGCGTTTAGTGCCACATC
TGCTCTCGTAATGTTTTGGCTCCTCGCTTCATTGTGAATAAATTTGTACAACCTCTGTCT
GTAGCTCCCCTCTGTTTGATCCCTTCTCTGTATACGAACTAATTTTTGAAGACGACAACA
CAACAGAAGTTCTGAAATGTC