Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0844800-03
CDS Infomation	cds chromosome:IRGSP-1.0:1:36279485:36286374:1 gene:Os01g0844800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pumilio RBD (Fragment). (Os01t0844800-01);Hypothetical conserved gene. (Os01t0844800-02);Similar to predicted protein. (Os01t0844800-03)
Sequence	GGAGAGCTGGAGGACGAGCTTGATGCCCTCCTCGGAACCGGTGGCGCTGGCGCGCGTCGG CGAGGTGAGGACGCGGGAGAGAGGGAACGGGAGCTCAACATGTTCAGGAGCGGGTCGGCG CCGCCGACTATAGAGGGTTCGCTGAACGCCATCAGCGGGCTGCTCCGCGGCGGTGGAGAG GCAGCCGTTACCGTTGCAGCGATTCCCGACGCTGAGACGTTGAACGGGCATGGTGGTCTC CTCTCGGAGGATGAGCTCCGGGCTGACCCGGCCTATCTATCCTACTACTACTCGCATGGC AATCTGAACCCAAGGTTGCCACCGCCGGTGCTATCCAAGGAGGACTGGCGGTCCACACAG AGACTGAAGGCGGGGGTGGTTGGAGGAATTGGTGACGGAAGGAAGGTATCGCCGGAGGAG ACTGGACATGAGCCGACGGTGGGGAGGCCTGTGTTCTCGCAGAATGTTGGTTTTGATCAG GAGGAGGCTGCAAGGAATGATGTAGGTGGTGCTGCAGAGTGGGTGGATGGTGGAGGTGAT GGGCTGATTGGTTTGTCGCTTGGGCGGCAGCGCAGCTTTGCTGATATCCTTCAGGACAAT ATTGGCCGCAGAACTCCTGCTTCAGAGCATCCCTCTCGTGCAGTTAGTCGCAATTCTTTT CTTGACAATCAGGAACTACTAAATTCTGCTGATAGCCAGTACTCCATGCATAATGATATT CTGGAAGCACAACGTGCTGTCGGAAATGTGCAAAATGTCAGTGGCCTTCCCAGTATTAAT GCATCCGCATCTCAAACTTTTGCATCTGTTCTGGGTTCATCTATTTCAAGGAATGCCACA CCAGATTCTCATTATGTCCCTAGGGTCCCTAGTCCTGGCCTTCCACCTGTCGGTGTTAGG ATTAATTCTAATGAGAAGAAGCTGAATTGCTCATCATCATTCAACACTGCATCTTCAAAA GCAGTTGAGCCTGATGATATTTTAGCTGCAATATCAAACATGAACATGTCAAAAGATGGT ACTTTGGGTGACAGTAACAGCATTAGTCAATCAAAGTTCCAAAGTGAGATAAGTGACCAC CAGAATATTTCTCTTGATCCAAAAGCTCTCCAAGTTAATAAGAATCAGCATTCGCTGATG TTGGAAGCTGATACTGATTATTTGGGTATACCACCAATTTCACAACCTTCAAATCCTTCC TTTTCTGATATTAACAAGAATGTCTCAGGTTTAGCGAACATAAGAAATTCTACTAACACA CGTATAGATGGACACGCGGAGATGCAAAGGTCTTCTACTTTGTCTACTCGGTCATATCAG AAGTCCCCAACATCTTCCAATGCGAGCCCAGGTGGTTCTCCTGCTCAACACCAGAATATT GACAATATAAATTCAGCCTTTTTGAACTATGGACTCGGTGGGTATCCACTCAGCCCGGGT TTGCCTTCTATGATGATGAACTGTATGGGCTCTGGCAATATGCCTCCTTTGTTCGAAAGT GCAGCTGCTGCATCTGCTATAGCTTCATTCGGGGCAGATTCGAGAAACCTTGGTAACAAT ATTTTGTCGTCACCTACCTTAAGTCTATCTGATGTGCATAACCTTGGCAGAACTGGTAAC CAAACAGCCACAGGTCTTTTGTCGCCTCTTTCTGATCCATTTTATGTCCAGTACTTGAAG GCAACTCAATATGCAGCACAAGGAACTGCCAACTGCAGTGATCCTTCCTTGGAAAGAGGT TTCATGGGTAGTCAATATGGTGATTTAACTGCTGTTCAGAAAGCTTATATTGAAGCTTTG CTTCAGCAGCAGAAACAATATGGAATGCCACTTGGTAAGTCAACCACGTCAAACCATGGC TATTATGGCAATTTGGCTTTTGGCATGGGCATGGCATACCCTGGAAGCCCTTTGGGAAGT CCTGTTGCTTCTCCATCTGGTCCTGGCAGTCCACTTAGACTCAGTGAGCGGAATATGAGA TTTCCTTCTAACTTGAGAAACTTGGGTGGCTGGAATTCTGATCCAAGTGGCTATATGAAT GATAACTTCCCATCTTCACTATTGGATGAATTCAAAAGTAATAAGGCCAGAAGTTTTGAA CTTGCTGAGATTGCCAGTCATGTGGTTGAGTTCAGCGCTGACCAATACGGAAGCCGTTTC ATACAGCAAAAACTTGAAACCGCAACAGTTGAGGAAAAAGACATGGTTTTTAAGGAGATC ATGCCTCAGGCTCTCTCGTTGATGACCGATGTATTTGGGAACTACGTGGTGCAGAAGTTC TTTGAGCACGGGAGTGCAGCACAGCGTAGGGAGCTGGCTGATCAACTATTTGGACATGTG TTAGCTCTCAGCCTTCAGATGTATGGATGCCGAGTTATCCAAAAGGCAATAGAAGTGGTT GACCTGGACCAGAAGACAAAAATGGTTACTGAGCTTGATGGCCATATCATGAGATGCGTG CGTGATCAAAATGGAAACCATGTTATCCAAAAATGTATTGAATGTGTACCGGAAGATTCG ATTCAGTTTATCATCTCAACATTCTATGGTCAAGTTGTTCCATTATCCACTCATCCCTAT GGCTGCAGAGTCATACAGAGAGTACTGGAGCATTGCACTGATCCAAAAACACAGGAAATA GTCATGGATGAAATATTGCAATCTGTGTGCATGTTGGCACAAGATCAATATGGAAATTAT GTTGTTCAGCATGTTTTGGAGCACGGGAAGCCTCATGAGCGATCTGTCATTATTGAAAAA CTAGCTGGGCAGATCATTCAGATGAGCCAACAGAAATTTGCCTCAAATGTTGTTGAGAAG TGTTTAACATTTGGCGGACCTGCAGAGCGGGAAGTTCTTATAAATGAAATGCTCGGAACT ACTGACGAGAATGAGCCTCTTCAGGCCATGATGAAGGATCAGTTTGGTAACTATGTTGTA CAGAAAGTACTGGAGACTTGTGATGATCAGCAGCGTGAGTTGATCCTGTCACGAGTAAAG GTTCATTTAAGTGCACTGAAGAAATATACATATGGGAAGCACATAGTTGCCCGGGTAGAA AAACTTGTTGCTGCCGGTGAGAGGAGGATTGGGCTTCAGGCACAATATCCTTCATAA

Peptide Sequence

PEP ID	Os01t0844800-03
PEP Infomation	pep chromosome:IRGSP-1.0:1:36279485:36286374:1 gene:Os01g0844800 transcript:Os01t0844800-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pumilio RBD (Fragment). (Os01t0844800-01);Hypothetical conserved gene. (Os01t0844800-02);Similar to predicted protein. (Os01t0844800-03)
Sequence	GELEDELDALLGTGGAGARRRGEDAGERERELNMFRSGSAPPTIEGSLNAISGLLRGGGE AAVTVAAIPDAETLNGHGGLLSEDELRADPAYLSYYYSHGNLNPRLPPPVLSKEDWRSTQ RLKAGVVGGIGDGRKVSPEETGHEPTVGRPVFSQNVGFDQEEAARNDVGGAAEWVDGGGD GLIGLSLGRQRSFADILQDNIGRRTPASEHPSRAVSRNSFLDNQELLNSADSQYSMHNDI LEAQRAVGNVQNVSGLPSINASASQTFASVLGSSISRNATPDSHYVPRVPSPGLPPVGVR INSNEKKLNCSSSFNTASSKAVEPDDILAAISNMNMSKDGTLGDSNSISQSKFQSEISDH QNISLDPKALQVNKNQHSLMLEADTDYLGIPPISQPSNPSFSDINKNVSGLANIRNSTNT RIDGHAEMQRSSTLSTRSYQKSPTSSNASPGGSPAQHQNIDNINSAFLNYGLGGYPLSPG LPSMMMNCMGSGNMPPLFESAAAASAIASFGADSRNLGNNILSSPTLSLSDVHNLGRTGN QTATGLLSPLSDPFYVQYLKATQYAAQGTANCSDPSLERGFMGSQYGDLTAVQKAYIEAL LQQQKQYGMPLGKSTTSNHGYYGNLAFGMGMAYPGSPLGSPVASPSGPGSPLRLSERNMR FPSNLRNLGGWNSDPSGYMNDNFPSSLLDEFKSNKARSFELAEIASHVVEFSADQYGSRF IQQKLETATVEEKDMVFKEIMPQALSLMTDVFGNYVVQKFFEHGSAAQRRELADQLFGHV LALSLQMYGCRVIQKAIEVVDLDQKTKMVTELDGHIMRCVRDQNGNHVIQKCIECVPEDS IQFIISTFYGQVVPLSTHPYGCRVIQRVLEHCTDPKTQEIVMDEILQSVCMLAQDQYGNY VVQHVLEHGKPHERSVIIEKLAGQIIQMSQQKFASNVVEKCLTFGGPAEREVLINEMLGT TDENEPLQAMMKDQFGNYVVQKVLETCDDQQRELILSRVKVHLSALKKYTYGKHIVARVE KLVAAGERRIGLQAQYPS

Transcript Sequence

Transcript ID	Os01t0844800-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:36279485:36286374:1 gene:Os01g0844800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pumilio RBD (Fragment). (Os01t0844800-01);Hypothetical conserved gene. (Os01t0844800-02);Similar to predicted protein. (Os01t0844800-03)
Sequence	AGGGAGAGCTGGAGGACGAGCTTGATGCCCTCCTCGGAACCGGTGGCGCTGGCGCGCGTC GGCGAGGTGAGGACGCGGGAGAGAGGGAACGGGAGCTCAACATGTTCAGGAGCGGGTCGG CGCCGCCGACTATAGAGGGTTCGCTGAACGCCATCAGCGGGCTGCTCCGCGGCGGTGGAG AGGCAGCCGTTACCGTTGCAGCGATTCCCGACGCTGAGACGTTGAACGGGCATGGTGGTC TCCTCTCGGAGGATGAGCTCCGGGCTGACCCGGCCTATCTATCCTACTACTACTCGCATG GCAATCTGAACCCAAGGTTGCCACCGCCGGTGCTATCCAAGGAGGACTGGCGGTCCACAC AGAGACTGAAGGCGGGGGTGGTTGGAGGAATTGGTGACGGAAGGAAGGTATCGCCGGAGG AGACTGGACATGAGCCGACGGTGGGGAGGCCTGTGTTCTCGCAGAATGTTGGTTTTGATC AGGAGGAGGCTGCAAGGAATGATGTAGGTGGTGCTGCAGAGTGGGTGGATGGTGGAGGTG ATGGGCTGATTGGTTTGTCGCTTGGGCGGCAGCGCAGCTTTGCTGATATCCTTCAGGACA ATATTGGCCGCAGAACTCCTGCTTCAGAGCATCCCTCTCGTGCAGTTAGTCGCAATTCTT TTCTTGACAATCAGGAACTACTAAATTCTGCTGATAGCCAGTACTCCATGCATAATGATA TTCTGGAAGCACAACGTGCTGTCGGAAATGTGCAAAATGTCAGTGGCCTTCCCAGTATTA ATGCATCCGCATCTCAAACTTTTGCATCTGTTCTGGGTTCATCTATTTCAAGGAATGCCA CACCAGATTCTCATTATGTCCCTAGGGTCCCTAGTCCTGGCCTTCCACCTGTCGGTGTTA GGATTAATTCTAATGAGAAGAAGCTGAATTGCTCATCATCATTCAACACTGCATCTTCAA AAGCAGTTGAGCCTGATGATATTTTAGCTGCAATATCAAACATGAACATGTCAAAAGATG GTACTTTGGGTGACAGTAACAGCATTAGTCAATCAAAGTTCCAAAGTGAGATAAGTGACC ACCAGAATATTTCTCTTGATCCAAAAGCTCTCCAAGTTAATAAGAATCAGCATTCGCTGA TGTTGGAAGCTGATACTGATTATTTGGGTATACCACCAATTTCACAACCTTCAAATCCTT CCTTTTCTGATATTAACAAGAATGTCTCAGGTTTAGCGAACATAAGAAATTCTACTAACA CACGTATAGATGGACACGCGGAGATGCAAAGGTCTTCTACTTTGTCTACTCGGTCATATC AGAAGTCCCCAACATCTTCCAATGCGAGCCCAGGTGGTTCTCCTGCTCAACACCAGAATA TTGACAATATAAATTCAGCCTTTTTGAACTATGGACTCGGTGGGTATCCACTCAGCCCGG GTTTGCCTTCTATGATGATGAACTGTATGGGCTCTGGCAATATGCCTCCTTTGTTCGAAA GTGCAGCTGCTGCATCTGCTATAGCTTCATTCGGGGCAGATTCGAGAAACCTTGGTAACA ATATTTTGTCGTCACCTACCTTAAGTCTATCTGATGTGCATAACCTTGGCAGAACTGGTA ACCAAACAGCCACAGGTCTTTTGTCGCCTCTTTCTGATCCATTTTATGTCCAGTACTTGA AGGCAACTCAATATGCAGCACAAGGAACTGCCAACTGCAGTGATCCTTCCTTGGAAAGAG GTTTCATGGGTAGTCAATATGGTGATTTAACTGCTGTTCAGAAAGCTTATATTGAAGCTT TGCTTCAGCAGCAGAAACAATATGGAATGCCACTTGGTAAGTCAACCACGTCAAACCATG GCTATTATGGCAATTTGGCTTTTGGCATGGGCATGGCATACCCTGGAAGCCCTTTGGGAA GTCCTGTTGCTTCTCCATCTGGTCCTGGCAGTCCACTTAGACTCAGTGAGCGGAATATGA GATTTCCTTCTAACTTGAGAAACTTGGGTGGCTGGAATTCTGATCCAAGTGGCTATATGA ATGATAACTTCCCATCTTCACTATTGGATGAATTCAAAAGTAATAAGGCCAGAAGTTTTG AACTTGCTGAGATTGCCAGTCATGTGGTTGAGTTCAGCGCTGACCAATACGGAAGCCGTT TCATACAGCAAAAACTTGAAACCGCAACAGTTGAGGAAAAAGACATGGTTTTTAAGGAGA TCATGCCTCAGGCTCTCTCGTTGATGACCGATGTATTTGGGAACTACGTGGTGCAGAAGT TCTTTGAGCACGGGAGTGCAGCACAGCGTAGGGAGCTGGCTGATCAACTATTTGGACATG TGTTAGCTCTCAGCCTTCAGATGTATGGATGCCGAGTTATCCAAAAGGCAATAGAAGTGG TTGACCTGGACCAGAAGACAAAAATGGTTACTGAGCTTGATGGCCATATCATGAGATGCG TGCGTGATCAAAATGGAAACCATGTTATCCAAAAATGTATTGAATGTGTACCGGAAGATT CGATTCAGTTTATCATCTCAACATTCTATGGTCAAGTTGTTCCATTATCCACTCATCCCT ATGGCTGCAGAGTCATACAGAGAGTACTGGAGCATTGCACTGATCCAAAAACACAGGAAA TAGTCATGGATGAAATATTGCAATCTGTGTGCATGTTGGCACAAGATCAATATGGAAATT ATGTTGTTCAGCATGTTTTGGAGCACGGGAAGCCTCATGAGCGATCTGTCATTATTGAAA AACTAGCTGGGCAGATCATTCAGATGAGCCAACAGAAATTTGCCTCAAATGTTGTTGAGA AGTGTTTAACATTTGGCGGACCTGCAGAGCGGGAAGTTCTTATAAATGAAATGCTCGGAA CTACTGACGAGAATGAGCCTCTTCAGGCCATGATGAAGGATCAGTTTGGTAACTATGTTG TACAGAAAGTACTGGAGACTTGTGATGATCAGCAGCGTGAGTTGATCCTGTCACGAGTAA AGGTTCATTTAAGTGCACTGAAGAAATATACATATGGGAAGCACATAGTTGCCCGGGTAG AAAAACTTGTTGCTGCCGGTGAGAGGAGGATTGGGCTTCAGGCACAATATCCTTCATAAT GGCATGAAAATGACAATGTACAGCTAACCATGGCTAGCCAGATCTACCCTGTGTCTCCTG CTTTGGGCTGCTACAAGCCAACTTTAAAAATAAACGTGTTGTACTAAGAAGATTGTACAT TTTGTAGTTTTTGCTTATAGTCATGTCAGGGGTGAGGCTCAGAGTTTATTTACCTGATGA CGCTGCAGAGAAGATAGGCGTTTTGTATAAGTCGGTTAGGTGTAAAAAGAGGAAGAAAGT CTATATTTTGCGATGAGACTGTACAAATCTGCGATCCTGAGAGAGCTACCAGCTGTTCCT GTTTAGGATAAGATTTTAATGATCTCCCATGTTTATCACTGATGAATGTACTCAATACTA ATGTAATTGTTCCAGCTTCTGAAGGCATGTGCCTTTTACAACCTTG