Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0842500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:36177292:36180127:-1 gene:Os01g0842500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 5 description:Similar to Laccase (EC 1.10.3.2). (Os01t0842500-01)
Sequence	ATGGCTATCTCCTACCTTCTCCGTTCCTCCATCCTCGCCGTCGCCGCGCTACTGCTCTTC TCCGTCAACCTGGCCAAGGGCGACATTAGGGAATACCAATTCGATGTGAAAACGACGAAC GTGACACGGCTGTGCAGCAGCAAGAGCATCGTGACGGTGAACGGGCAGTTCCCGGGGCCG ACTGTGTTCGCGAGGGAAGGCGACCTCGTCGTCATCCGGGTCATCAACCACTCCCCCTAC AACATGAGCATCCACTGGCACGGCATCCGGCAGCTGCGGAGCGGGTGGGCGGACGGGCCG GCGTACATCACGCAGTGCCCGATCCAGCCGGGCGGCAGCTACGTGTACAAGTACACCATC ACCGGGCAGCGCGGCACGCTGTGGTGGCACGCGCACATCTCCTGGCTCCGCGCCACCGTG TACGGCCCCATCATCATCCTCCCCAAGGCCGGCGTCCCCTACCCGTTCCCGGCGCCGGAC AAGGAGGTCCCCGTCGTCTTCGGCGAGTGGTGGAAGGCGGACACGGAGGCGGTGATAAGC CAGGCGACGCAGACCGGCGGAGGCCCGAACGTCTCCGACGCGTTCACCATCAATGGCCTC CCTGGGCCGCTCTACAACTGCTCTGCCAAAGATACGTTCAAGCTGAAGGTGGAGGCCGGG AAGACGTACATGCTGCGGCTCATCAACGCTGCGCTCAATGACGAGCTCTTCTTCTCCATC GCCGGGCACACGCTCACCGTGGTCGACGTCGACGCGGTCTACGTCAAGCCATTCACCGTG GACACCCTCCTCATCACCCCGGGCCAGACCACCAACGTGCTCCTCACCACCAAGCCGTCG TACCCCGGTGCGACGTTCTACATGCTGGCGGCGCCATACTCCACGGCGATGTCCGGCACG TTCGACAACACCACCGTCGCGGGAATCCTCGAGTACGAGGACCCCAGCTCCCACTCCACC GCGGCGTTCAACAAGAACCTCCCGGTGCTCAGGCCCACCCTGCCGCAGATCAACGACACC AGCTTCGTCTCCAACTACACCGCAAAGCTCCGCAGCTTCGCCACGGCGGAGTACCCGGCG AACGTGCCGCAGCAGGTGGACACGCGGTTCTTCTTCACCGTCGGCCTGGGCACGCACCCC TGCGCCGTGAACGGGACGTGCCAGGGTCCCAACGGGAGCCGGTTCGCGGCGGCCGTGAAC AACGTCTCCTTCGTGCTCCCCTCCACGGCGCTGCTGCAGTCGCACTACACCGGCAGGTCC AACGGGGTGTACGCCTCCAACTTCCCGGCCATGCCGCTGTCGCCGTTCAACTACACCGGG ACGCCGCCGAACAACACCAACGTGTCCAACGGGACGAGGCTGGTCGTGCTCCCGTACGGC GCGTCGGTCGAGCTGGTGATGCAGGGCACCAGCGTCCTTGGCGCCGAGAGCCACCCGTTC CACCTGCACGGCTTCAACTTCTTCGTCGTCGGCCAAGGGTTCGGCAACTTCGACCCCGTG AACGACCCGGCCAAGTACAACCTCGTCGACCCCGTCGAGCGCAACACCGTCGGCGTGCCG GCGGCCGGCTGGGTTGCCATTCGCTTCCTCGTGGACAATCCAGGGGTATGGTTCATGCAT TGCCACTTGGAGGTGCACGTCAGCTGGGGCCTGAAGATGGCATGGGTGGTGCAGGACGGG AGCCTACCCAACCAGAAGATCCTCCCTCCGCCGTCCGATCTCCCCAAATGCTAA

Peptide Sequence

PEP ID	Os01t0842500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:36177292:36180127:-1 gene:Os01g0842500 transcript:Os01t0842500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 5 description:Similar to Laccase (EC 1.10.3.2). (Os01t0842500-01)
Sequence	MAISYLLRSSILAVAALLLFSVNLAKGDIREYQFDVKTTNVTRLCSSKSIVTVNGQFPGP TVFAREGDLVVIRVINHSPYNMSIHWHGIRQLRSGWADGPAYITQCPIQPGGSYVYKYTI TGQRGTLWWHAHISWLRATVYGPIIILPKAGVPYPFPAPDKEVPVVFGEWWKADTEAVIS QATQTGGGPNVSDAFTINGLPGPLYNCSAKDTFKLKVEAGKTYMLRLINAALNDELFFSI AGHTLTVVDVDAVYVKPFTVDTLLITPGQTTNVLLTTKPSYPGATFYMLAAPYSTAMSGT FDNTTVAGILEYEDPSSHSTAAFNKNLPVLRPTLPQINDTSFVSNYTAKLRSFATAEYPA NVPQQVDTRFFFTVGLGTHPCAVNGTCQGPNGSRFAAAVNNVSFVLPSTALLQSHYTGRS NGVYASNFPAMPLSPFNYTGTPPNNTNVSNGTRLVVLPYGASVELVMQGTSVLGAESHPF HLHGFNFFVVGQGFGNFDPVNDPAKYNLVDPVERNTVGVPAAGWVAIRFLVDNPGVWFMH CHLEVHVSWGLKMAWVVQDGSLPNQKILPPPSDLPKC

Transcript Sequence

Transcript ID	Os01t0842500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:36177292:36180127:-1 gene:Os01g0842500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 5 description:Similar to Laccase (EC 1.10.3.2). (Os01t0842500-01)
Sequence	ATCGATCTCAAACACATTCATAGCCCATTAGCCGACGAGAGCTCTCAGTGTACGTAAGTC GAGAGCTCGAGGAGGCATCCATGGCTATCTCCTACCTTCTCCGTTCCTCCATCCTCGCCG TCGCCGCGCTACTGCTCTTCTCCGTCAACCTGGCCAAGGGCGACATTAGGGAATACCAAT TCGATGTGAAAACGACGAACGTGACACGGCTGTGCAGCAGCAAGAGCATCGTGACGGTGA ACGGGCAGTTCCCGGGGCCGACTGTGTTCGCGAGGGAAGGCGACCTCGTCGTCATCCGGG TCATCAACCACTCCCCCTACAACATGAGCATCCACTGGCACGGCATCCGGCAGCTGCGGA GCGGGTGGGCGGACGGGCCGGCGTACATCACGCAGTGCCCGATCCAGCCGGGCGGCAGCT ACGTGTACAAGTACACCATCACCGGGCAGCGCGGCACGCTGTGGTGGCACGCGCACATCT CCTGGCTCCGCGCCACCGTGTACGGCCCCATCATCATCCTCCCCAAGGCCGGCGTCCCCT ACCCGTTCCCGGCGCCGGACAAGGAGGTCCCCGTCGTCTTCGGCGAGTGGTGGAAGGCGG ACACGGAGGCGGTGATAAGCCAGGCGACGCAGACCGGCGGAGGCCCGAACGTCTCCGACG CGTTCACCATCAATGGCCTCCCTGGGCCGCTCTACAACTGCTCTGCCAAAGATACGTTCA AGCTGAAGGTGGAGGCCGGGAAGACGTACATGCTGCGGCTCATCAACGCTGCGCTCAATG ACGAGCTCTTCTTCTCCATCGCCGGGCACACGCTCACCGTGGTCGACGTCGACGCGGTCT ACGTCAAGCCATTCACCGTGGACACCCTCCTCATCACCCCGGGCCAGACCACCAACGTGC TCCTCACCACCAAGCCGTCGTACCCCGGTGCGACGTTCTACATGCTGGCGGCGCCATACT CCACGGCGATGTCCGGCACGTTCGACAACACCACCGTCGCGGGAATCCTCGAGTACGAGG ACCCCAGCTCCCACTCCACCGCGGCGTTCAACAAGAACCTCCCGGTGCTCAGGCCCACCC TGCCGCAGATCAACGACACCAGCTTCGTCTCCAACTACACCGCAAAGCTCCGCAGCTTCG CCACGGCGGAGTACCCGGCGAACGTGCCGCAGCAGGTGGACACGCGGTTCTTCTTCACCG TCGGCCTGGGCACGCACCCCTGCGCCGTGAACGGGACGTGCCAGGGTCCCAACGGGAGCC GGTTCGCGGCGGCCGTGAACAACGTCTCCTTCGTGCTCCCCTCCACGGCGCTGCTGCAGT CGCACTACACCGGCAGGTCCAACGGGGTGTACGCCTCCAACTTCCCGGCCATGCCGCTGT CGCCGTTCAACTACACCGGGACGCCGCCGAACAACACCAACGTGTCCAACGGGACGAGGC TGGTCGTGCTCCCGTACGGCGCGTCGGTCGAGCTGGTGATGCAGGGCACCAGCGTCCTTG GCGCCGAGAGCCACCCGTTCCACCTGCACGGCTTCAACTTCTTCGTCGTCGGCCAAGGGT TCGGCAACTTCGACCCCGTGAACGACCCGGCCAAGTACAACCTCGTCGACCCCGTCGAGC GCAACACCGTCGGCGTGCCGGCGGCCGGCTGGGTTGCCATTCGCTTCCTCGTGGACAATC CAGGGGTATGGTTCATGCATTGCCACTTGGAGGTGCACGTCAGCTGGGGCCTGAAGATGG CATGGGTGGTGCAGGACGGGAGCCTACCCAACCAGAAGATCCTCCCTCCGCCGTCCGATC TCCCCAAATGCTAACCGATCGACACCGGCCGACCAGAGACAGAGATTGCGTCTTGCTCAT CAGCTTCCCTGTAGGATACTCGGATACTCCTCTGCTTTTGCTAGCTTGCTTCTGTTGATT GCTCGCGGTTGGTGCTATGGAATGCTTTTCTTGTAGTGGTGTGCCTTTCCGAAGTTGTGT CGTCATCTGGTTAGCTGATGTACGAATGATCATGGGCAAGTTTCTTGATCAGACGCAAGG CCTTTAATTTTGGGCTTCTCATTATTATTTGTCACCTTTTGTAACATATGAGGGAGCTGG ATCATAAATCCACGTTCATCCCAATAATTTGTACCATCATTTGATGTACGGCAAAGGATT TTTTTATGTACTATTTCATATTAATCAATGTTTGTTATATTGTTTTGGAG