Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0840200-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:36044182:36046520:-1 gene:Os01g0840200 gene_biotype:protein_coding transcript_biotype:protein_coding description:HSP20-like chaperone domain containing protein. (Os01t0840200-01)
Sequence	ATGGGGGAAGACCTCGTCACCACCCTGTCCATGGAGAACGGCGGCGGTGGCGGTGGCGGT GGCCACCACAGCCTCTGCACCCTTCTCTCCATGGATCCCGCCGGCCACCTCGACGACCGC GCCGTCGGGGTCATGGTGCAGCCCCGCATCGGGGACGGCGCCGGGCGCGCCCACGCCGTG TCGCTCTCCGGCGCGCATCCGCCGGACATCAACCAGCCGTGGCAGACTGACCTCTGCGAC ATGCTCGACGTCAGCCTCGGCCCGCAGATTCAGGTGTACGACGCCGAGGCGCTCGCCGTG CTGAGCAGTGCCCCGAAGGCTGGGAACCGCAAGGCCGCCAAGCGCGGGGACAGCATCTGG GGCGCCTGGTTCTTCTTCACGTTCTACTTCAAGCCCCTGCTCGCGGACAAGTGCAAAGGC AAGGTCACCCGGGATGCCAACGGTGTGTCAGGGTTTGACAAGACGGATCTCCGGCTCGAC ATGTTCATGGTGCAGCACGACATGGAGAACATGTACATGTGGGTCTTCAAGGAGCGGCCG GAGAATGCCCTTGGCAAGATGCAGCTGAGGAGCTACATGAACGGGCACTCCCGCCCTGGT GAGCCGCAATTCCCGTTCAGCGTTGACAGGGGATTTGTGCGATCACACCGGATGCAGCGC AAGCACTACCGTGGACTCTCAAACCCACAGTGTATTCATGGAATTGAGGTGGTGAGATCA CCAAATCTTGCAAGCATAACTGAGGTAGACAGGAGGAGGTGGGTGGAGCTTACAGGGAGG GAGCTCAATTTCGCAATCCCGCAGGAGGCCTGTGATTTTGGGACATGGAGGACTATGCCA AACACAGAGATTGAGCTTGACAGGCCACATCCTGTCATGAAGGGCAACGTTCATCAACAC CCAAAGAAGCTGCTTAATGGATCTGGCTTGAATTTGTCATCACCCTCCAATCACTCAGGA GAAGATGGCATGGATCTCTCCCCAGTTAGCAGCAAGCGCAGGAAGGAGGTGTTTCCGCAT GCCATGGATGAGGAATGCTTCTTGCCACTCAACTCTTGCGGCGAGAGGACACAACAAGAT GTGGAGATGCATTCAGTAGTGCAGCCTTCATGGCAGCACGAATTTTCTGGGGTGATGAAA AAGGCTCGCGGGCCTGTGACTGCCGCCAAGTCGATTTATGAAGATGACCAAGGCTACTTG ATAATGGTCAGCTTACCATTTGTTGATCAGCAGAAGGTGAAAGTTTCATGGAGGAACAGT CTTACTCATGGTATAGTAAAGATCCTTTGTGTTAGTACAGCCCAGACGCCATACATCAGA AGGCATGACAGGGTATTCAAGCTTGCTGATCCTATGCCTGAGCACTGCCCTCATGGGGAA TTTGTCCGTGAAATACCTCTAGCAACTCGCATCCCTGAAGACGCTAAGCTAGAAGCATAC TTTGATGAGGCCGCTGCAGTGCTTGAGATCATGGTTCCCAAACGTGGAAATGAGCCAGAA GAACATGAAGTAAGAGTCTCTATGCGCCCCCCTCACCTTGCAGCTAACGATCTACTCCTG ACATAA

Peptide Sequence

PEP ID	Os01t0840200-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:36044182:36046520:-1 gene:Os01g0840200 transcript:Os01t0840200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:HSP20-like chaperone domain containing protein. (Os01t0840200-01)
Sequence	MGEDLVTTLSMENGGGGGGGGHHSLCTLLSMDPAGHLDDRAVGVMVQPRIGDGAGRAHAV SLSGAHPPDINQPWQTDLCDMLDVSLGPQIQVYDAEALAVLSSAPKAGNRKAAKRGDSIW GAWFFFTFYFKPLLADKCKGKVTRDANGVSGFDKTDLRLDMFMVQHDMENMYMWVFKERP ENALGKMQLRSYMNGHSRPGEPQFPFSVDRGFVRSHRMQRKHYRGLSNPQCIHGIEVVRS PNLASITEVDRRRWVELTGRELNFAIPQEACDFGTWRTMPNTEIELDRPHPVMKGNVHQH PKKLLNGSGLNLSSPSNHSGEDGMDLSPVSSKRRKEVFPHAMDEECFLPLNSCGERTQQD VEMHSVVQPSWQHEFSGVMKKARGPVTAAKSIYEDDQGYLIMVSLPFVDQQKVKVSWRNS LTHGIVKILCVSTAQTPYIRRHDRVFKLADPMPEHCPHGEFVREIPLATRIPEDAKLEAY FDEAAAVLEIMVPKRGNEPEEHEVRVSMRPPHLAANDLLLT

Transcript Sequence

Transcript ID	Os01t0840200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:36044182:36046520:-1 gene:Os01g0840200 gene_biotype:protein_coding transcript_biotype:protein_coding description:HSP20-like chaperone domain containing protein. (Os01t0840200-01)
Sequence	CTTCCCCTTTTCTCCCACCTCGCCGCGCACCCCTCCCCTCCCCATGTCCTCGCCTTCCTC CCCGCGCTCTTGCTCCCGCAGCTTCACGCTTCCCCCGCACTAGTACAGACTCCTGATGGT GGTGGAGGTAAACCTCGGCGGCTAACCCATCGTCCACCGCGCGCGGCGGCTCTGTTTTTG GTTTGGGCGGCATTTTGGTCTCCTTGGGGGTGTGGATTTGGGTTGGGGGGGAGGAGAGCT GGGTGAAGATTTGTGGCGGAAACTGTTGGGGGGGAATTGATGGTGGGATTCATGGAGTGC GTGCACGATTGGTTGCTGTGGGACGCCGTCCTGGAATGCGGAGGGATCCGGAGGCCACCG ATTAGATAGCGGCCGGGGGAGGAGGGAGAGGAGAGGAGAGAGGAGCAGGCGGTGGCAGAG GCGGAGGCCGTCGCCATTAGCACCAGTCACCCCGAGGCGCGAGTCACCAAGCCATGGGGG AAGACCTCGTCACCACCCTGTCCATGGAGAACGGCGGCGGTGGCGGTGGCGGTGGCCACC ACAGCCTCTGCACCCTTCTCTCCATGGATCCCGCCGGCCACCTCGACGACCGCGCCGTCG GGGTCATGGTGCAGCCCCGCATCGGGGACGGCGCCGGGCGCGCCCACGCCGTGTCGCTCT CCGGCGCGCATCCGCCGGACATCAACCAGCCGTGGCAGACTGACCTCTGCGACATGCTCG ACGTCAGCCTCGGCCCGCAGATTCAGGTGTACGACGCCGAGGCGCTCGCCGTGCTGAGCA GTGCCCCGAAGGCTGGGAACCGCAAGGCCGCCAAGCGCGGGGACAGCATCTGGGGCGCCT GGTTCTTCTTCACGTTCTACTTCAAGCCCCTGCTCGCGGACAAGTGCAAAGGCAAGGTCA CCCGGGATGCCAACGGTGTGTCAGGGTTTGACAAGACGGATCTCCGGCTCGACATGTTCA TGGTGCAGCACGACATGGAGAACATGTACATGTGGGTCTTCAAGGAGCGGCCGGAGAATG CCCTTGGCAAGATGCAGCTGAGGAGCTACATGAACGGGCACTCCCGCCCTGGTGAGCCGC AATTCCCGTTCAGCGTTGACAGGGGATTTGTGCGATCACACCGGATGCAGCGCAAGCACT ACCGTGGACTCTCAAACCCACAGTGTATTCATGGAATTGAGGTGGTGAGATCACCAAATC TTGCAAGCATAACTGAGGTAGACAGGAGGAGGTGGGTGGAGCTTACAGGGAGGGAGCTCA ATTTCGCAATCCCGCAGGAGGCCTGTGATTTTGGGACATGGAGGACTATGCCAAACACAG AGATTGAGCTTGACAGGCCACATCCTGTCATGAAGGGCAACGTTCATCAACACCCAAAGA AGCTGCTTAATGGATCTGGCTTGAATTTGTCATCACCCTCCAATCACTCAGGAGAAGATG GCATGGATCTCTCCCCAGTTAGCAGCAAGCGCAGGAAGGAGGTGTTTCCGCATGCCATGG ATGAGGAATGCTTCTTGCCACTCAACTCTTGCGGCGAGAGGACACAACAAGATGTGGAGA TGCATTCAGTAGTGCAGCCTTCATGGCAGCACGAATTTTCTGGGGTGATGAAAAAGGCTC GCGGGCCTGTGACTGCCGCCAAGTCGATTTATGAAGATGACCAAGGCTACTTGATAATGG TCAGCTTACCATTTGTTGATCAGCAGAAGGTGAAAGTTTCATGGAGGAACAGTCTTACTC ATGGTATAGTAAAGATCCTTTGTGTTAGTACAGCCCAGACGCCATACATCAGAAGGCATG ACAGGGTATTCAAGCTTGCTGATCCTATGCCTGAGCACTGCCCTCATGGGGAATTTGTCC GTGAAATACCTCTAGCAACTCGCATCCCTGAAGACGCTAAGCTAGAAGCATACTTTGATG AGGCCGCTGCAGTGCTTGAGATCATGGTTCCCAAACGTGGAAATGAGCCAGAAGAACATG AAGTAAGAGTCTCTATGCGCCCCCCTCACCTTGCAGCTAACGATCTACTCCTGACATAAC CAGTGGAAGGTCTATCAACCATATAGTCTTGTTTCTGACCACCAGATCAATGCCCAAACA TGGCTGAGAAGGTATGAGCATGACTGTGTTGGGAGTTTTGCTTTCTGAGTATTTGTCGTA CTGCACTAGGCCTCTTCAGCGAAGTCTGCTGAAGGCTACTCAGTTTGTTCTAGTATGTTA TGATGGGTGTCTTTTTAGCCCTCATGCTCTTCTCCTTTGTAGAATATGGCTAGATTGCTT TTTCTAGAATTTGTACTGTGTTGAATTAACCAGAAATAAATTGTCTGAATTACTATTCC