Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0840100-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:36039716:36043151:1 gene:Os01g0840100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:heat-shock protein 70, heat-shock protein cognate 70, Mediator 37_1 description:Heat shock protein Hsp70 family protein. (Os01t0840100-01)
Sequence	ATGGCGAAGGGAGAGGGCCCGGCGATCGGCATCGACCTCGGCACCACCTACTCGTGCGTC GGCGTGTGGCAGCACGACCGGGTGGAGATCATCGCCAACGACCAGGGGAACCGCACCACG CCGTCGTATGTCGCGTTCACCGACTCCGAGCGGCTCATCGGCGACGCCGCCAAGAACCAG GTCGCCATGAACCCCATCAACACCGTCTTCGATGCCAAGCGACTGATAGGTAGGCGGTTC TCCGACCCGTCCGTGCAGAGTGACATGAAGCTGTGGCCGTTCAAGGTCATCCCTGGCCCC GGCGATAAGCCTATGATTGTGGTGCAGTACAAGGGCGAGGAGAAGCAGTTCTCCGCCGAG GAGATCTCCTCCATGGTGCTCATCAAGATGAGGGAGATCGCTGAAGCCTACCTCGGCTCC AACATCAAGAACGCCGTGGTGACTGTGCCGGCCTACTTCAACGACTCGCAGAGGCAGGCC ACCAAGGACGCCGGTGTCATTGCCGGCCTCAACGTGATGCGCATCATCAACGAGCCCACC GCCGCGGCCATCGCCTACGGTCTTGACAAGAAGGCCACCAGCTCCGGCGAGAAGAACGTG CTCATCTTCGATCTTGGCGGTGGCACGTTCGATGTGTCGCTGCTCACCATTGAGGAGGGC ATTTTCGAGGTGAAGGCCACTGCTGGTGACACTCACCTTGGTGGTGAGGACTTCGACAAC CGCATGGTGAACCATTTCGTCCTGGAGTTCAAGCGCAAGAACAAGAAGGACATCAGCGGC AACCCGCGTGCTCTGCGCCGGCTGCGCACGGCCTGCGAGCGCGCCAAGCGCACGCTGTCG TCGACCGCACAGACCACCATTGAGATCGACTCCCTGTACGAGGGCATCGACTTCTACTCG ACCATCACCAGGGCTCGCTTCGAGGAGCTCAACATGGACCTGTTCCGCAAGTGCATGGAG CCGGTGGAGAAGTGCCTGCGCGACGCCAAGATGGACAAGAGCAGCGTGCACGACGTCGTG CTCGTCGGCGGCTCCACCCGCATCCCCAAGGTGCAGCAGCTGCTTCAGGACTTCTTCAAC GGCAAGGAGCTGTGCAAGAGCATCAACCCCGACGAGGCCGTGGCATACGGCGCCGCTGTC CAGGCCGCCATCCTCAGCGGCGAGGGCAACGAGAAGGTGCAGGACCTGCTTCTGCTCGAC GTCACGCCGCTGTCGCTGGGGCTCGAGACAGCAGGAGGTGTCATGACCGTGCTCATCCCG AGGAACACCACCATCCCCACCAAGAAGGAGCAGGTGTTCTCGACCTACTCCGACAATCAG CCTGGCGTCCTGATCCAGGTGTACGAGGGTGAGCGTGCCCGGACCAAGGACAACAACCTG CTGGGCAAGTTCGAGCTCTCCGGCATCCCTCCAGCTCCCCGCGGCGTGCCCCAGATCACC GTCTGCTTTGACATCGACGCCAATGGCATCCTCAACGTCTCTGCCGAGGACAAGACCACC GGGCAGAAGAACAAGATCACCATCACCAACGACAAGGGCAGGCTGAGCAAGGAGGAGATC GAGAAGATGGTGCAGGAGGCGGAGAAGTACAAGGCGGAGGACGAGGAGCACAAGAAGAAG GTGGACGCCAAGAACGCGCTCGAGAACTACGCCTACAACATGAGGAACACCATCAAGGAC GACAAGATCGCCTCCAAGCTCTCGGCGGACGACAAGAAGAAGATCGAGGACGCCATCGAC GGCGCCATCAACTGGCTCGACAGCAACCAGCTCGCGGAGGCGGACGAGTTCGAGGACAAG ATGAAGGAGCTGGAGAGCATCTGCAACCCCATCATCGCGAAGATGTACCAGGGCGCCGGC GCGGACATGGGCGGCGCCGCTGGCATGGACGAGGACGCGCCGGCGGGTGGCAGCGGTGCA GGCCCCAAGATCGAGGAGGTCGATTAA

Peptide Sequence

PEP ID	Os01t0840100-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:36039716:36043151:1 gene:Os01g0840100 transcript:Os01t0840100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:heat-shock protein 70, heat-shock protein cognate 70, Mediator 37_1 description:Heat shock protein Hsp70 family protein. (Os01t0840100-01)
Sequence	MAKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQ VAMNPINTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPGDKPMIVVQYKGEEKQFSAE EISSMVLIKMREIAEAYLGSNIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPT AAAIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDN RMVNHFVLEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYS TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFN GKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIP RNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQIT VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKK VDAKNALENYAYNMRNTIKDDKIASKLSADDKKKIEDAIDGAINWLDSNQLAEADEFEDK MKELESICNPIIAKMYQGAGADMGGAAGMDEDAPAGGSGAGPKIEEVD

Transcript Sequence

Transcript ID	Os01t0840100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:36039716:36043151:1 gene:Os01g0840100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:heat-shock protein 70, heat-shock protein cognate 70, Mediator 37_1 description:Heat shock protein Hsp70 family protein. (Os01t0840100-01)
Sequence	AAAAGAATTCCGAGCTCGCAAGGCGAAGAAATCTCGCAACAATCTCATCAGATCTCGAGA TCTCATCAGGTTTGGTTTGTTCCCGTCGGATTTTTCTTTTCCACTGTTCGATCTTCCTGT TCGTGCGAGATGGCGAAGGGAGAGGGCCCGGCGATCGGCATCGACCTCGGCACCACCTAC TCGTGCGTCGGCGTGTGGCAGCACGACCGGGTGGAGATCATCGCCAACGACCAGGGGAAC CGCACCACGCCGTCGTATGTCGCGTTCACCGACTCCGAGCGGCTCATCGGCGACGCCGCC AAGAACCAGGTCGCCATGAACCCCATCAACACCGTCTTCGATGCCAAGCGACTGATAGGT AGGCGGTTCTCCGACCCGTCCGTGCAGAGTGACATGAAGCTGTGGCCGTTCAAGGTCATC CCTGGCCCCGGCGATAAGCCTATGATTGTGGTGCAGTACAAGGGCGAGGAGAAGCAGTTC TCCGCCGAGGAGATCTCCTCCATGGTGCTCATCAAGATGAGGGAGATCGCTGAAGCCTAC CTCGGCTCCAACATCAAGAACGCCGTGGTGACTGTGCCGGCCTACTTCAACGACTCGCAG AGGCAGGCCACCAAGGACGCCGGTGTCATTGCCGGCCTCAACGTGATGCGCATCATCAAC GAGCCCACCGCCGCGGCCATCGCCTACGGTCTTGACAAGAAGGCCACCAGCTCCGGCGAG AAGAACGTGCTCATCTTCGATCTTGGCGGTGGCACGTTCGATGTGTCGCTGCTCACCATT GAGGAGGGCATTTTCGAGGTGAAGGCCACTGCTGGTGACACTCACCTTGGTGGTGAGGAC TTCGACAACCGCATGGTGAACCATTTCGTCCTGGAGTTCAAGCGCAAGAACAAGAAGGAC ATCAGCGGCAACCCGCGTGCTCTGCGCCGGCTGCGCACGGCCTGCGAGCGCGCCAAGCGC ACGCTGTCGTCGACCGCACAGACCACCATTGAGATCGACTCCCTGTACGAGGGCATCGAC TTCTACTCGACCATCACCAGGGCTCGCTTCGAGGAGCTCAACATGGACCTGTTCCGCAAG TGCATGGAGCCGGTGGAGAAGTGCCTGCGCGACGCCAAGATGGACAAGAGCAGCGTGCAC GACGTCGTGCTCGTCGGCGGCTCCACCCGCATCCCCAAGGTGCAGCAGCTGCTTCAGGAC TTCTTCAACGGCAAGGAGCTGTGCAAGAGCATCAACCCCGACGAGGCCGTGGCATACGGC GCCGCTGTCCAGGCCGCCATCCTCAGCGGCGAGGGCAACGAGAAGGTGCAGGACCTGCTT CTGCTCGACGTCACGCCGCTGTCGCTGGGGCTCGAGACAGCAGGAGGTGTCATGACCGTG CTCATCCCGAGGAACACCACCATCCCCACCAAGAAGGAGCAGGTGTTCTCGACCTACTCC GACAATCAGCCTGGCGTCCTGATCCAGGTGTACGAGGGTGAGCGTGCCCGGACCAAGGAC AACAACCTGCTGGGCAAGTTCGAGCTCTCCGGCATCCCTCCAGCTCCCCGCGGCGTGCCC CAGATCACCGTCTGCTTTGACATCGACGCCAATGGCATCCTCAACGTCTCTGCCGAGGAC AAGACCACCGGGCAGAAGAACAAGATCACCATCACCAACGACAAGGGCAGGCTGAGCAAG GAGGAGATCGAGAAGATGGTGCAGGAGGCGGAGAAGTACAAGGCGGAGGACGAGGAGCAC AAGAAGAAGGTGGACGCCAAGAACGCGCTCGAGAACTACGCCTACAACATGAGGAACACC ATCAAGGACGACAAGATCGCCTCCAAGCTCTCGGCGGACGACAAGAAGAAGATCGAGGAC GCCATCGACGGCGCCATCAACTGGCTCGACAGCAACCAGCTCGCGGAGGCGGACGAGTTC GAGGACAAGATGAAGGAGCTGGAGAGCATCTGCAACCCCATCATCGCGAAGATGTACCAG GGCGCCGGCGCGGACATGGGCGGCGCCGCTGGCATGGACGAGGACGCGCCGGCGGGTGGC AGCGGTGCAGGCCCCAAGATCGAGGAGGTCGATTAAGCTGGTGGTGGTCCTACGTGATTC CGGCTGGAAGGGAGTCTGAACCGTGTGATGTGGCTGGCGTCGTGTGATCCCCTGTGTTTT TTAGCCGTCGAGAGTTTCGTGCGATGAAGCTTTTGTAAGTGTGTATCGCCGTATGGTTTT ACCTGAACTTGCTCTGAAATAGTTTAAGCTTTGACCT