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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0839500-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:36014027:36014684:-1 gene:Os01g0839500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:H2B.11 description:Histone-fold domain containing protein. (Os01t0839500-00)
Sequence

ATGGCGCCCAAGGCGGAGAAGAAGCCCGCGGAGAAGAAGCCGGTGGAGGAGAAGGCGGAG
AAGAAGCCCAAGGCCGAGAAGCGGGTGCCGGGCGCCAAGGAGGGCGGCGGCGAGAAGAAG
GGGAAGAAGAAGGCCAAGAAGAGCGTCGAAACTTATAAGATCTACATTTTCAAGGTCCTC
AAGCAGGTGCATCCCGATATCGGGATATCGTCCAAGGCCATGTCGATCATGAACTCGTTC
ATCAACGATATCTTCGAGAAGCTCGCCCAGGAGGCCGCCCGTCTCGCCCGCTACAACAAG
AAGCCGACCATCACCTCCCGCGAGATCCAGACCTCGGTGCGCCTCGTCCTCCCCGGCGAG
CTCGCCAAGCACGCCGTCTCTGAGGGCACCAAGGCCGTCACCAAGTTCACGTCGTCTTAA

Peptide Sequence

PEP ID

Os01t0839500-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:36014027:36014684:-1 gene:Os01g0839500 transcript:Os01t0839500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:H2B.11 description:Histone-fold domain containing protein. (Os01t0839500-00)
Sequence

MAPKAEKKPAEKKPVEEKAEKKPKAEKRVPGAKEGGGEKKGKKKAKKSVETYKIYIFKVL
KQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGE
LAKHAVSEGTKAVTKFTSS

Transcript Sequence

Transcript ID

Os01t0839500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:36014027:36014684:-1 gene:Os01g0839500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:H2B.11 description:Histone-fold domain containing protein. (Os01t0839500-00)
Sequence

GGCGAAAGCAAATCAAATCCAATCCACCTCTCGCCTCCAAATCCCAAATCCTCTACTCGT
CGTCGTCGCGGTTCATCTCCAGCGAATTCCCGATGGCGCCCAAGGCGGAGAAGAAGCCCG
CGGAGAAGAAGCCGGTGGAGGAGAAGGCGGAGAAGAAGCCCAAGGCCGAGAAGCGGGTGC
CGGGCGCCAAGGAGGGCGGCGGCGAGAAGAAGGGGAAGAAGAAGGCCAAGAAGAGCGTCG
AAACTTATAAGATCTACATTTTCAAGGTCCTCAAGCAGGTGCATCCCGATATCGGGATAT
CGTCCAAGGCCATGTCGATCATGAACTCGTTCATCAACGATATCTTCGAGAAGCTCGCCC
AGGAGGCCGCCCGTCTCGCCCGCTACAACAAGAAGCCGACCATCACCTCCCGCGAGATCC
AGACCTCGGTGCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCTGAGGGCA
CCAAGGCCGTCACCAAGTTCACGTCGTCTTAAGACGCGTGATCTGTTCATGTTCGTTGGA
TGTTTATCTGTTCTGATGTTTATTTAGAGCGCTCTTAGATTTCCCACATGGAACAATGTA
GTATCGGTGAAATTCGCTATAAATGAATCGCTGATCTTATCACAACTTTCAATGTGTT