Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0837900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:35925492:35929372:-1 gene:Os01g0837900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein kinase AFC1 (EC 2.7.1.-). (Os01t0837900-01);Non-protein coding transcript. (Os01t0837900-02)
Sequence	ATGGAGGCGCAGTGGCTCGCCGAGTACCCGCACCAGGGCGCCGACAAGCGGCCGCGGAAG CGGCCCCGCCTCGCCTGGGATGTCGCGCCCCCGCTGTTCCAGCCCCCCAAGGCAATTCCT ATGCTATATTGCGGGCAGGAACTAATCAATGGAAATTTTGCGACCGCTTTTCTGCCACCG CCACCAATCTATTATACAGGACCACCACGCAATCTTTCGCCTCCCTGGAGGCCAGATGAC AAGGATGGACACTATGTTTTCGCAGTTGGGGAGAACCTTACACCAAGATATAGAATACTT AGCAAGATGGGTGAAGGGACTTTTGGACAAGTCTTAGAGTGCTGGGACTTGGAACACCAA GAGACAGTGGCTATCAAAATTGTGCGCTCCCTTCAGAAATATCGAGAGGCTGCTATGATT GAAATTGATGTGCTTCAGAGGCTTGGGAAGCATGATTTTACTGGTAGCCGCTGTGTGCAA ATACGGAATTGGTTTGACTATCGTAATCATATATGTATAGTATTTGAGAGGCTCGGACCA AGCTTATATGACTTCCTCCGAAAGAATAGTTATCGTGCATTTCCGATCGACCTTGTTCGG GAATTTGCCAGACAAATATTAGAGTCTGTTGCATTTATGCATGACCTGCGACTTATTCAC ACAGATCTGAAACCTGAGAACATTCTCCTTGTTTCATCAGAATCTATCCGGGTGCCTGAT TATAAGGTTACAATACGGCCCCCAAAGGATGGTTCCTTTTTTAAGAATCTTCCAAAATCT AGTGCTATCAAGCTGATTGATTTTGGAAGTACAACATTCGAACACCAAGACCACAATTAT GTGGTATCAACAAGGCATTATCGTGCCCCTGAAGTTATCCTTGGTCTTGGGTGGAATTAT TCATGTGATTTGTGGAGTGTGGGATGCATTTTAGTTGAACTCTGCTCGGGTGAAGCTCTC TTTCAAACACATGAAAATTTGGAGCATTTGGCTATGATGGAGAGAGTTCTAGGTCCCCTT CCAAAACATATGATTGTCAGAGCTGATCGCCGTGCTGAAAAGTATTTCAGACGTGGATTA AGGTTGGACTGGCCAGAGGGGGCTGCCTCACGGGAAAGCCTGAAGGCAGTCTGGAAATTG CCTCGTCTGCAGAATCTGGTAATGCAACATGTTGATCATTCTGCTGGAGATCTTATAGAT CTTCTTCAAGGCCTTCTTCGGTATGATCCTGATGCGCGCCTAAAGGCACGTGAAGCTCTT CAACACCCGTTCTTTACAAGATGCCACAGAAGATGTGGTTACTGA

Peptide Sequence

PEP ID	Os01t0837900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:35925492:35929372:-1 gene:Os01g0837900 transcript:Os01t0837900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein kinase AFC1 (EC 2.7.1.-). (Os01t0837900-01);Non-protein coding transcript. (Os01t0837900-02)
Sequence	MEAQWLAEYPHQGADKRPRKRPRLAWDVAPPLFQPPKAIPMLYCGQELINGNFATAFLPP PPIYYTGPPRNLSPPWRPDDKDGHYVFAVGENLTPRYRILSKMGEGTFGQVLECWDLEHQ ETVAIKIVRSLQKYREAAMIEIDVLQRLGKHDFTGSRCVQIRNWFDYRNHICIVFERLGP SLYDFLRKNSYRAFPIDLVREFARQILESVAFMHDLRLIHTDLKPENILLVSSESIRVPD YKVTIRPPKDGSFFKNLPKSSAIKLIDFGSTTFEHQDHNYVVSTRHYRAPEVILGLGWNY SCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPKHMIVRADRRAEKYFRRGL RLDWPEGAASRESLKAVWKLPRLQNLVMQHVDHSAGDLIDLLQGLLRYDPDARLKAREAL QHPFFTRCHRRCGY

Transcript Sequence

Transcript ID	Os01t0837900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:35925492:35929372:-1 gene:Os01g0837900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein kinase AFC1 (EC 2.7.1.-). (Os01t0837900-01);Non-protein coding transcript. (Os01t0837900-02)
Sequence	ACCAGACCAGACCACCTCCTCCTCGAGCTTCCCCTCCTCCCCCTCTTTCCAAATTTCCCC AATCTCGCGTCGCTTCTTCCCCGAATTCCCCAACCTCGCATCCCGATTCCTCCCGCGGAT CGTGCGGCGACCTCGCCCAAAATCCCCCGCCGGATTGGCCTCGCCGATGGCTTAATTGGC GATTTCGACTCTGCAATGGAGGCGCAGTGGCTCGCCGAGTACCCGCACCAGGGCGCCGAC AAGCGGCCGCGGAAGCGGCCCCGCCTCGCCTGGGATGTCGCGCCCCCGCTGTTCCAGCCC CCCAAGGCAATTCCTATGCTATATTGCGGGCAGGAACTAATCAATGGAAATTTTGCGACC GCTTTTCTGCCACCGCCACCAATCTATTATACAGGACCACCACGCAATCTTTCGCCTCCC TGGAGGCCAGATGACAAGGATGGACACTATGTTTTCGCAGTTGGGGAGAACCTTACACCA AGATATAGAATACTTAGCAAGATGGGTGAAGGGACTTTTGGACAAGTCTTAGAGTGCTGG GACTTGGAACACCAAGAGACAGTGGCTATCAAAATTGTGCGCTCCCTTCAGAAATATCGA GAGGCTGCTATGATTGAAATTGATGTGCTTCAGAGGCTTGGGAAGCATGATTTTACTGGT AGCCGCTGTGTGCAAATACGGAATTGGTTTGACTATCGTAATCATATATGTATAGTATTT GAGAGGCTCGGACCAAGCTTATATGACTTCCTCCGAAAGAATAGTTATCGTGCATTTCCG ATCGACCTTGTTCGGGAATTTGCCAGACAAATATTAGAGTCTGTTGCATTTATGCATGAC CTGCGACTTATTCACACAGATCTGAAACCTGAGAACATTCTCCTTGTTTCATCAGAATCT ATCCGGGTGCCTGATTATAAGGTTACAATACGGCCCCCAAAGGATGGTTCCTTTTTTAAG AATCTTCCAAAATCTAGTGCTATCAAGCTGATTGATTTTGGAAGTACAACATTCGAACAC CAAGACCACAATTATGTGGTATCAACAAGGCATTATCGTGCCCCTGAAGTTATCCTTGGT CTTGGGTGGAATTATTCATGTGATTTGTGGAGTGTGGGATGCATTTTAGTTGAACTCTGC TCGGGTGAAGCTCTCTTTCAAACACATGAAAATTTGGAGCATTTGGCTATGATGGAGAGA GTTCTAGGTCCCCTTCCAAAACATATGATTGTCAGAGCTGATCGCCGTGCTGAAAAGTAT TTCAGACGTGGATTAAGGTTGGACTGGCCAGAGGGGGCTGCCTCACGGGAAAGCCTGAAG GCAGTCTGGAAATTGCCTCGTCTGCAGAATCTGGTAATGCAACATGTTGATCATTCTGCT GGAGATCTTATAGATCTTCTTCAAGGCCTTCTTCGGTATGATCCTGATGCGCGCCTAAAG GCACGTGAAGCTCTTCAACACCCGTTCTTTACAAGATGCCACAGAAGATGTGGTTACTGA GACTATACTGAGATTAAAATGCTCAATGCTGTATTTCTTCATTTTGATGTGTAAGAACCA CCCAAAAAAAAAGTGAAGATGTTCCACAAAAATGAAATGTGCTAACTCGCATTCTGTTCG ATGATGTGCAAGGTAACTGTTGTATATAGACAGAGTTCTACGACTGCCGATTTATTTTAA CTGGGAGATATTTTTCAATTCTT