Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0837500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:35902972:35908325:1 gene:Os01g0837500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ruvbl1 protein. (Os01t0837500-01);Similar to DNA helicase, TBP-interacting protein. (Os01t0837500-02)
Sequence	ATGAGGATCGAGGAGGTGCAGTCGGCGGCGAAGAAGCAGCGCATCGCCACCCACACCCAC ATCAAGGGCCTCGGCCTCGACGCCAATGGGGCGGCGATAGGGCTGGCTTCGGGGTTCGTG GGGCAGGCGGCGGCGCGGGAGGCGGCCGGCCTGGTGGTCGACATGATCCGCCAGAAGAAG ATGGCCGGCCGCGCGCTGCTCCTCGCCGGCCCGCCCGCCACCGGCAAGACGGCCCTCGCT CTCGGCATCTCTCAGGAGCTAGGTAGTAAGGTCCCCTTCTGTCCTATGGTGGGATCAGAA GTGTATTCCTCAGAGGTCAAGAAAACTGAGGTGCTGATGGAAAATTTCCGTCGAGCTATA GGCTTGCGTATAAAAGAAAATAAAGAGGTTTATGAAGGAGAGGTTACTGAACTTTCGCCA GAAGAAGCTGAGAGTACAACAAGTGGATATGGAAAAAGCATTAGCCATGTAATCATAGGT CTGAAGACTGTAAAAGGGACTAAGCAGCTGAAGTTAGATCCTACAATTTACGATGCTTTA ATAAAGGAAAAGGTGGCAGTGGGTGATGTTATATACATTGAAGCTAATAGTGGTGCAGTG AAAAGAGTTGGTAGATGTGATTCTTTTGCTACAGAATACGATCTTGAAGCTGAGGAGTAT GTTCCGATTCCCAAAGGAGAGGTCCATAAGAAAAAGGAAATAGTGCAGGATGTTACACTT CATGACCTTGACGCTGCAAATGCTCAACCACAAGGAGGCCAAGATATTTTGTCCCTTATG GGGCAAATGATGAAGCCACGAAAGACTGAAATCACTGACAAGCTTCGGCAAGAAATCAAT AAGGTGGTCAACAGATATATTGATGAAGGAATTGCAGAGCTTGTACCTGGTGTTCTGTTC ATTGATGAGGTCCACATGCTAGATATTGAATGCTTCTCTTATCTTAATCGTGCTCTGGAG AGCCCATTATCACCAATTGTGATACTTGCGACAAATAGAGGAATATGTAATGTAAGAGGA ACTGATATGACAAGTCCGCATGGTATACCAGTTGATCTTCTAGATCGATTGGTGATTATT CGAACAGAAACATACGGTCCCACTGAGATGATCCAGATTCTTGCTATTAGAGCACAGGTA GAAGAGATTGAGATCGATGAAGAAAGTCTTGCATTTTTAGGAGAGATCGGACAACAGACA TCTTTGAGGCATGCTATTCAGCTGCTATCACCTGCCAGCGTAGTTGCAAAGGCTAATGGG AGAGAAAAGATCAGCAAGGCCGATCTTGAGGAAGTCAGTGGTCTGTACTTGGATGCTAAA TCGTCGGCGCGTCTCCTTCAGGAGCAGCAGGAAAGATACATCACCTAA

Peptide Sequence

PEP ID	Os01t0837500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:35902972:35908325:1 gene:Os01g0837500 transcript:Os01t0837500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ruvbl1 protein. (Os01t0837500-01);Similar to DNA helicase, TBP-interacting protein. (Os01t0837500-02)
Sequence	MRIEEVQSAAKKQRIATHTHIKGLGLDANGAAIGLASGFVGQAAAREAAGLVVDMIRQKK MAGRALLLAGPPATGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAI GLRIKENKEVYEGEVTELSPEEAESTTSGYGKSISHVIIGLKTVKGTKQLKLDPTIYDAL IKEKVAVGDVIYIEANSGAVKRVGRCDSFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTL HDLDAANAQPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGIAELVPGVLF IDEVHMLDIECFSYLNRALESPLSPIVILATNRGICNVRGTDMTSPHGIPVDLLDRLVII RTETYGPTEMIQILAIRAQVEEIEIDEESLAFLGEIGQQTSLRHAIQLLSPASVVAKANG REKISKADLEEVSGLYLDAKSSARLLQEQQERYIT

Transcript Sequence

Transcript ID	Os01t0837500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:35902972:35908325:1 gene:Os01g0837500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ruvbl1 protein. (Os01t0837500-01);Similar to DNA helicase, TBP-interacting protein. (Os01t0837500-02)
Sequence	AGCGCTCCCCGCCGTTCCCAAATTTGTTGCGGCGGGAGAGGGTCGGAGAGACAAGCAGCG GCGGCGGCGGCGCGTGCTCGGCGGCGGCGATGAGGATCGAGGAGGTGCAGTCGGCGGCGA AGAAGCAGCGCATCGCCACCCACACCCACATCAAGGGCCTCGGCCTCGACGCCAATGGGG CGGCGATAGGGCTGGCTTCGGGGTTCGTGGGGCAGGCGGCGGCGCGGGAGGCGGCCGGCC TGGTGGTCGACATGATCCGCCAGAAGAAGATGGCCGGCCGCGCGCTGCTCCTCGCCGGCC CGCCCGCCACCGGCAAGACGGCCCTCGCTCTCGGCATCTCTCAGGAGCTAGGTAGTAAGG TCCCCTTCTGTCCTATGGTGGGATCAGAAGTGTATTCCTCAGAGGTCAAGAAAACTGAGG TGCTGATGGAAAATTTCCGTCGAGCTATAGGCTTGCGTATAAAAGAAAATAAAGAGGTTT ATGAAGGAGAGGTTACTGAACTTTCGCCAGAAGAAGCTGAGAGTACAACAAGTGGATATG GAAAAAGCATTAGCCATGTAATCATAGGTCTGAAGACTGTAAAAGGGACTAAGCAGCTGA AGTTAGATCCTACAATTTACGATGCTTTAATAAAGGAAAAGGTGGCAGTGGGTGATGTTA TATACATTGAAGCTAATAGTGGTGCAGTGAAAAGAGTTGGTAGATGTGATTCTTTTGCTA CAGAATACGATCTTGAAGCTGAGGAGTATGTTCCGATTCCCAAAGGAGAGGTCCATAAGA AAAAGGAAATAGTGCAGGATGTTACACTTCATGACCTTGACGCTGCAAATGCTCAACCAC AAGGAGGCCAAGATATTTTGTCCCTTATGGGGCAAATGATGAAGCCACGAAAGACTGAAA TCACTGACAAGCTTCGGCAAGAAATCAATAAGGTGGTCAACAGATATATTGATGAAGGAA TTGCAGAGCTTGTACCTGGTGTTCTGTTCATTGATGAGGTCCACATGCTAGATATTGAAT GCTTCTCTTATCTTAATCGTGCTCTGGAGAGCCCATTATCACCAATTGTGATACTTGCGA CAAATAGAGGAATATGTAATGTAAGAGGAACTGATATGACAAGTCCGCATGGTATACCAG TTGATCTTCTAGATCGATTGGTGATTATTCGAACAGAAACATACGGTCCCACTGAGATGA TCCAGATTCTTGCTATTAGAGCACAGGTAGAAGAGATTGAGATCGATGAAGAAAGTCTTG CATTTTTAGGAGAGATCGGACAACAGACATCTTTGAGGCATGCTATTCAGCTGCTATCAC CTGCCAGCGTAGTTGCAAAGGCTAATGGGAGAGAAAAGATCAGCAAGGCCGATCTTGAGG AAGTCAGTGGTCTGTACTTGGATGCTAAATCGTCGGCGCGTCTCCTTCAGGAGCAGCAGG AAAGATACATCACCTAAGATCTCTTGCTGTACGACGATGTATTTGTCCTTAGTCATTCCG CTGGATCTCTGATAACTTGGTACTAAAGTGCGAAGACTTCTTTAGGGCACTGGATTGATT TATGCGGAAATGTAGAATCCGAACTCTGTACTCCCGCCAACCTCTAGAGGAAAACTTGAT TTCGGCATATTGCTTGTTCACATTACTCCTTGCTGAGTAGATTGCATATGAATTATCGTG TATTTTGGTTTCCCATGCTAATTAGTTCCAGATTCCGTTTGTC