Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0834200-03
CDS Infomation	cds chromosome:IRGSP-1.0:1:35732750:35743623:1 gene:Os01g0834200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-cell immune regulator 1 transcript variant 3 (Fragment). (Os01t0834200-01);Similar to VHA-A1 (VACUOLAR PROTON ATPASE A 1); ATPase. (Os01t0834200-02);Similar to T-cell immune regulator 1 transcript variant 3 (Fragment). (Os01t0834200-03);Similar to VHA-A1 (VACUOLAR PROTON ATPASE A 1); ATPase. (Os01t0834200-04)
Sequence	ATGGGGGTGTTCGACCGGCTGCCGCCGATGGACCGCCTGCGGTCCGAGAAGATGTGCTTC GTGCAGCTCATCATCCCCGCCGAGAGCGCGCGCCTCGCCGTCACCTACCTCGGCGAGCTC GGGCTCCTCCAGTTCAAGGACTTGAATGAGGATAAGAGTCCTTTTCAGCGTATATTTGTC AATCAGGTAAAGCGATGCTCTGAAATGTCACGCAAACTAAGATTTTTCAATGATCAGATC AACAAGGCAGGTGTAAAGTCCTCTGTTCGACCTGCAATGCAACCAGATATAGATTTGGAG GAGCTAGAGGCAAAATTGCGCGAGCATGAGAATGATCTGCTTGAGATGAATACAAATAGT GAGAAACTACTACAAACATACAATGAGCTTCTTGAATTCAAGATGGTCTTGTCAAAGGCA GGTGGTATTCTTGCTTCTTCTCACAATCATGCTGCTCCAGCTGAGCGGGAGCTAGATGAA CACATATATGACAAGGAAATGGATGATGGAAATGCCTATTTACTTGAACAGGGTGTGCAT CTAGGGGCTTCGGAGAATTCTGGAGTGAAGTTTGTTAGTGGGATTATTTTAAAGTCCAAG GCAATGGCTTTTGAGAGGATGCTATTCCGAGCTACAAGGGGGAATATGTTTTTCAATCAG GCGCCTGCAGGGGAACCTGTTACTGATCCCATTTCTGGTGAAGAGGTAGAGAAAACTGTT TTCGTAGTTTTCTTTTCTGGGGATCAGGCTAAAGCAAAAATATTAAAGATTTGCGGTTCA TTTGGAGCAAGTTGCTACCCTGTTCCCGAGGAGATGGTTAAGCAGAGACAGATTTTTCGC GAGGTATCTGGACGCCTTGCTGATCTGGAAGCCACTTTGGATGCTGGAATCCAGCACAGA AACAAAGCACTAGAGTCAGTAGGTTCACAATTATGGAGGTGGACAATCATGGTGAAAAAA GAGAAAGCTGTATATGATACATTGAACATGCTGAATTTTGATGTCACGAAGAAATGCCTT GTTGGGGAAGGATGGTGTCCTATATTTGCTAAATCACAGATCAAGGATGTTTTGCAGCGT GCAACGCTTCACAGTAATTCACAAGTTGGAATAATATTTCATGAGATGGACACTATTGAT TCACCGCCTACATATTTCCAAACCGATAAGTTCACTAACGCTTTCCAGGAGATAGTTGAC GCATATGGTATTGCTCGATATGAGGAAGCTAATCCAGCTGTCTATTCTGTCATCACATTC CCATTTCTTTTTGCTGTGATGTTTGGAGATTGGGGTCATGGTATATGTCTATTGTTAGGA GCATGTGTTCTTATACTTCGTGAGAAGAAACTTTCCTCTCAGAAGCTTGGTAGCTTTATG GAGATGGCATTTGGTGGGCGTTATGTTATCCTTCTGATGGCATTGTTCTCAATATACTGT GGGCTTATATACAATGAGTTTTTCTCAGTTCCATTTCATATATTCGGGAAATCAGCGTAT GAATGTCGAGAGAAAACCTGCAGTGATGCACATACTGCTGGGCTCATTAAAGTCCGTGAT CCCTATCCTTTTGGAGTGGACCCAAGTTGGCGTGGAAGTCGATCTGAGCTACCCTTTCTA AACTCCTTGAAGATGAAGATGTCTATACTAATGGGTGTAACCCAGATGAACTTGGGGATT GTATTGAGTTATTTTGATGCAAAGTTTCATGGAAATGCTCTTGACATAAGGTATCAATTC ATACCACAGATGATCTTTCTGAACAGCCTCTTTGGCTACTTAGCACTCCTAATTCTCATC AAGTGGTGCACGGGCTCTCAAGCTGACCTATATCATGTGATGATATATATGTTCCTTGAT CCTTCTGGCAATCTTGGAGAAAATCAACTATTTTGGGGCCAGAAGGAACTTCAGATACTT TTGTTGCTTATGGCTATTGTAGCTGTTCCGTGGATGCTCTTCCCAAAGCCTTTTATCTTG AAGAAACTTCACAAGGAGAGGTTTCAAGGTCACACCTATCGCTTTCTTGGGACCTCAGAA ATGGATCCAGATTCTGAACCAGACTCAGCCCGGTCACGTCATGATGACTTCAACTTTAGT GAAGTTTTTGTGCATCAAATGATACATTCCATTGAATTTGTACTTGGCGCTGTCTCCAAT ACTGCATCGTATCTTCGGCTTTGGGCATTAAGTTTGGCGCATTCTGAGCTATCAACAGTC TTCTATGAGAAACTGCTGGTACTTGCTTGGGGGTATGACAATCTTGTTGTGAAGTTAGTG GGGCTTGTAATTTTTTCTTTTGCTACTGCCTTTATATTGCTGGGGATGGAATCATTGAGC GCCTTCCTTCATGCACTTCGTCTACACTGGGTTGAGTTTATGAACAAGTTCTACCATGGG GATGGCTATAAATTCAGACCCTTTTCATTCGCTCTGCTAGCTGATGACGAAGACTGA

Peptide Sequence

PEP ID	Os01t0834200-03
PEP Infomation	pep chromosome:IRGSP-1.0:1:35732750:35743623:1 gene:Os01g0834200 transcript:Os01t0834200-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-cell immune regulator 1 transcript variant 3 (Fragment). (Os01t0834200-01);Similar to VHA-A1 (VACUOLAR PROTON ATPASE A 1); ATPase. (Os01t0834200-02);Similar to T-cell immune regulator 1 transcript variant 3 (Fragment). (Os01t0834200-03);Similar to VHA-A1 (VACUOLAR PROTON ATPASE A 1); ATPase. (Os01t0834200-04)
Sequence	MGVFDRLPPMDRLRSEKMCFVQLIIPAESARLAVTYLGELGLLQFKDLNEDKSPFQRIFV NQVKRCSEMSRKLRFFNDQINKAGVKSSVRPAMQPDIDLEELEAKLREHENDLLEMNTNS EKLLQTYNELLEFKMVLSKAGGILASSHNHAAPAERELDEHIYDKEMDDGNAYLLEQGVH LGASENSGVKFVSGIILKSKAMAFERMLFRATRGNMFFNQAPAGEPVTDPISGEEVEKTV FVVFFSGDQAKAKILKICGSFGASCYPVPEEMVKQRQIFREVSGRLADLEATLDAGIQHR NKALESVGSQLWRWTIMVKKEKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKSQIKDVLQR ATLHSNSQVGIIFHEMDTIDSPPTYFQTDKFTNAFQEIVDAYGIARYEEANPAVYSVITF PFLFAVMFGDWGHGICLLLGACVLILREKKLSSQKLGSFMEMAFGGRYVILLMALFSIYC GLIYNEFFSVPFHIFGKSAYECREKTCSDAHTAGLIKVRDPYPFGVDPSWRGSRSELPFL NSLKMKMSILMGVTQMNLGIVLSYFDAKFHGNALDIRYQFIPQMIFLNSLFGYLALLILI KWCTGSQADLYHVMIYMFLDPSGNLGENQLFWGQKELQILLLLMAIVAVPWMLFPKPFIL KKLHKERFQGHTYRFLGTSEMDPDSEPDSARSRHDDFNFSEVFVHQMIHSIEFVLGAVSN TASYLRLWALSLAHSELSTVFYEKLLVLAWGYDNLVVKLVGLVIFSFATAFILLGMESLS AFLHALRLHWVEFMNKFYHGDGYKFRPFSFALLADDED

Transcript Sequence

Transcript ID	Os01t0834200-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:35732750:35743623:1 gene:Os01g0834200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to T-cell immune regulator 1 transcript variant 3 (Fragment). (Os01t0834200-01);Similar to VHA-A1 (VACUOLAR PROTON ATPASE A 1); ATPase. (Os01t0834200-02);Similar to T-cell immune regulator 1 transcript variant 3 (Fragment). (Os01t0834200-03);Similar to VHA-A1 (VACUOLAR PROTON ATPASE A 1); ATPase. (Os01t0834200-04)
Sequence	AGATCTGAGACAAGCCACCGGGCTCCCTCTCCCTCCTCGCGCGCGCGGGGCCTTCGCGAA CCTCCTGGAAGCTTCCGGAGGCGGAGGCGGCGGCTGCTCCGGGGAGATGGGGGTGTTCGA CCGGCTGCCGCCGATGGACCGCCTGCGGTCCGAGAAGATGTGCTTCGTGCAGCTCATCAT CCCCGCCGAGAGCGCGCGCCTCGCCGTCACCTACCTCGGCGAGCTCGGGCTCCTCCAGTT CAAGGACTTGAATGAGGATAAGAGTCCTTTTCAGCGTATATTTGTCAATCAGGTAAAGCG ATGCTCTGAAATGTCACGCAAACTAAGATTTTTCAATGATCAGATCAACAAGGCAGGTGT AAAGTCCTCTGTTCGACCTGCAATGCAACCAGATATAGATTTGGAGGAGCTAGAGGCAAA ATTGCGCGAGCATGAGAATGATCTGCTTGAGATGAATACAAATAGTGAGAAACTACTACA AACATACAATGAGCTTCTTGAATTCAAGATGGTCTTGTCAAAGGCAGGTGGTATTCTTGC TTCTTCTCACAATCATGCTGCTCCAGCTGAGCGGGAGCTAGATGAACACATATATGACAA GGAAATGGATGATGGAAATGCCTATTTACTTGAACAGGGTGTGCATCTAGGGGCTTCGGA GAATTCTGGAGTGAAGTTTGTTAGTGGGATTATTTTAAAGTCCAAGGCAATGGCTTTTGA GAGGATGCTATTCCGAGCTACAAGGGGGAATATGTTTTTCAATCAGGCGCCTGCAGGGGA ACCTGTTACTGATCCCATTTCTGGTGAAGAGGTAGAGAAAACTGTTTTCGTAGTTTTCTT TTCTGGGGATCAGGCTAAAGCAAAAATATTAAAGATTTGCGGTTCATTTGGAGCAAGTTG CTACCCTGTTCCCGAGGAGATGGTTAAGCAGAGACAGATTTTTCGCGAGGTATCTGGACG CCTTGCTGATCTGGAAGCCACTTTGGATGCTGGAATCCAGCACAGAAACAAAGCACTAGA GTCAGTAGGTTCACAATTATGGAGGTGGACAATCATGGTGAAAAAAGAGAAAGCTGTATA TGATACATTGAACATGCTGAATTTTGATGTCACGAAGAAATGCCTTGTTGGGGAAGGATG GTGTCCTATATTTGCTAAATCACAGATCAAGGATGTTTTGCAGCGTGCAACGCTTCACAG TAATTCACAAGTTGGAATAATATTTCATGAGATGGACACTATTGATTCACCGCCTACATA TTTCCAAACCGATAAGTTCACTAACGCTTTCCAGGAGATAGTTGACGCATATGGTATTGC TCGATATGAGGAAGCTAATCCAGCTGTCTATTCTGTCATCACATTCCCATTTCTTTTTGC TGTGATGTTTGGAGATTGGGGTCATGGTATATGTCTATTGTTAGGAGCATGTGTTCTTAT ACTTCGTGAGAAGAAACTTTCCTCTCAGAAGCTTGGTAGCTTTATGGAGATGGCATTTGG TGGGCGTTATGTTATCCTTCTGATGGCATTGTTCTCAATATACTGTGGGCTTATATACAA TGAGTTTTTCTCAGTTCCATTTCATATATTCGGGAAATCAGCGTATGAATGTCGAGAGAA AACCTGCAGTGATGCACATACTGCTGGGCTCATTAAAGTCCGTGATCCCTATCCTTTTGG AGTGGACCCAAGTTGGCGTGGAAGTCGATCTGAGCTACCCTTTCTAAACTCCTTGAAGAT GAAGATGTCTATACTAATGGGTGTAACCCAGATGAACTTGGGGATTGTATTGAGTTATTT TGATGCAAAGTTTCATGGAAATGCTCTTGACATAAGGTATCAATTCATACCACAGATGAT CTTTCTGAACAGCCTCTTTGGCTACTTAGCACTCCTAATTCTCATCAAGTGGTGCACGGG CTCTCAAGCTGACCTATATCATGTGATGATATATATGTTCCTTGATCCTTCTGGCAATCT TGGAGAAAATCAACTATTTTGGGGCCAGAAGGAACTTCAGATACTTTTGTTGCTTATGGC TATTGTAGCTGTTCCGTGGATGCTCTTCCCAAAGCCTTTTATCTTGAAGAAACTTCACAA GGAGAGGTTTCAAGGTCACACCTATCGCTTTCTTGGGACCTCAGAAATGGATCCAGATTC TGAACCAGACTCAGCCCGGTCACGTCATGATGACTTCAACTTTAGTGAAGTTTTTGTGCA TCAAATGATACATTCCATTGAATTTGTACTTGGCGCTGTCTCCAATACTGCATCGTATCT TCGGCTTTGGGCATTAAGTTTGGCGCATTCTGAGCTATCAACAGTCTTCTATGAGAAACT GCTGGTACTTGCTTGGGGGTATGACAATCTTGTTGTGAAGTTAGTGGGGCTTGTAATTTT TTCTTTTGCTACTGCCTTTATATTGCTGGGGATGGAATCATTGAGCGCCTTCCTTCATGC ACTTCGTCTACACTGGGTTGAGTTTATGAACAAGTTCTACCATGGGGATGGCTATAAATT CAGACCCTTTTCATTCGCTCTGCTAGCTGATGACGAAGACTGATGCATACAAAATTCAGC AGATAAAGAGATTAAGCTTGTTTCTTGCCATTTTTGGAGCACGTGAGTGGAATTCTTTCG ACCAAGATGGGTTTCCCCAATACACAGCATTTTGTCAGACCGCCGGGCTTCTTCCGAACG CATGTGTGCAGTCCTGGTTGAGATTGCCAGCGTGGTGGGAGGAGATTTTGTAAGTTCACG GCAATACTGTAGAGGGCAGGTTTCTCGTACAGTTCCTCCAGTGGAGAAGCAGATTATAGA TGCTAACAACAAAGATAGAAATGTAGATTTGCTATGTCTACTTTTAGCTCTTATACTTTG TCCAAGTGACTGTCCCAGTATCCCTTACCACTTGAAAATGGAAGTTGCAGTCGTTTTTTT TAATCATTACGTGATTAGGTTGTAACGAAGGGTGACAATTATTGAACTACAATGTTTGTC AATTCAAATAAGAAAAGCTAAAGCATATATGGTTTCCC