Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0833400-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:35686540:35687796:1 gene:Os01g0833400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0833400-01);Conserved hypothetical protein. (Os01t0833400-02)
Sequence

ATGGTGAGGTCTCTCGACAGCTACCCCTCCATCAAAGATGTCACCTACAGCTGCGGATAC
TGCGGGTACGCGCTGAACCTGAGCTCGTCGACGCGGAACACGGCGAACATCGGGTCCAAG
TACGGGAAGCAGATCAAGAAGGGGGTCGTCTCCTTCTTCGCGGTGGACGAGAGCCGGTTC
ACGCAGGCCGACGAGGTCACCTGCGTGCCCTACTTCCACTCGCGGCGCTCCTGGGGGCTC
TTCCGGCGGAGGTCGCGGCTGCTGTGCCGGAAGTGCGGCGGCCGCATCGGCAGCGCCTAC
GAGGAGGACGAACCCGCCGCCGCGGCGCTGCCCGCGTGCGACGGCCCGGACGACCTGCGC
ACCACGAGCTCCGGGAGCAGCGGCAGCGCGTCGAGCCAGAAGAACTACGTGATCAAGATC
AACGCGCTGCAGCCCTCGTCGGACGATTCTGATGCTGTTGCCTTTACCCTATGA

Peptide Sequence

PEP ID

Os01t0833400-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:35686540:35687796:1 gene:Os01g0833400 transcript:Os01t0833400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0833400-01);Conserved hypothetical protein. (Os01t0833400-02)
Sequence

MVRSLDSYPSIKDVTYSCGYCGYALNLSSSTRNTANIGSKYGKQIKKGVVSFFAVDESRF
TQADEVTCVPYFHSRRSWGLFRRRSRLLCRKCGGRIGSAYEEDEPAAAALPACDGPDDLR
TTSSGSSGSASSQKNYVIKINALQPSSDDSDAVAFTL

Transcript Sequence

Transcript ID

Os01t0833400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:35686540:35687796:1 gene:Os01g0833400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0833400-01);Conserved hypothetical protein. (Os01t0833400-02)
Sequence

ATTGCCGCCCCGTTTCTCTCTCTGATCGGCAAAAAAGTGGATGCTCCGGCTGCTCGACCG
CCATGGTGAGGTCTCTCGACAGCTACCCCTCCATCAAAGATGTCACCTACAGCTGCGGAT
ACTGCGGGTACGCGCTGAACCTGAGCTCGTCGACGCGGAACACGGCGAACATCGGGTCCA
AGTACGGGAAGCAGATCAAGAAGGGGGTCGTCTCCTTCTTCGCGGTGGACGAGAGCCGGT
TCACGCAGGCCGACGAGGTCACCTGCGTGCCCTACTTCCACTCGCGGCGCTCCTGGGGGC
TCTTCCGGCGGAGGTCGCGGCTGCTGTGCCGGAAGTGCGGCGGCCGCATCGGCAGCGCCT
ACGAGGAGGACGAACCCGCCGCCGCGGCGCTGCCCGCGTGCGACGGCCCGGACGACCTGC
GCACCACGAGCTCCGGGAGCAGCGGCAGCGCGTCGAGCCAGAAGAACTACGTGATCAAGA
TCAACGCGCTGCAGCCCTCGTCGGACGATTCTGATGCTGTTGCCTTTACCCTATGACGAT
TCTGCTGTAGCCTGTCATCTCTTCCGGCCCGGTTGAATTTGCTGCTGCAGTCTTGGAATT
CGCATTGGGAGTGCAAAAAGGGTGATATTGCAGTCAAGGAAGGGATCGCCATGGCAGTGA
GCTTTTGGAAGGGTTTGATACCATCATGATCTTGAGTCACCTTTGCTGTCTGTAGTAGAC
TAGTAGTGCTTTTCTTTTCTTCTGTGAATTGGTGGGAGTATACACTGGTTGTTAATTTTT
GGATCTGTTAATATTGGAAAATGACAAAGTTTGCTGTATGTGGCTTGGCCCTATTGAGTT
TGTACCATCTCATGAGGTTCATAGGGGTTGCAATTTTGAGTCATCTTGCTTTACTGGTAT
GTCTTAAGTTTCTCTACACGGATTCTTCATTAGTCTTCTAAGAAAGCATGGGTTGTTGCA
TTGTGTCAGTTACTGAATATAAATTCTCTGTTAAACTTTAAATTATAGTCTTTTGGTTTT
CCAGAAATAGGCATGTATCTTCAGTTTTGTTAAGCTGATAAGGTGAAACC