Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0832000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:35601142:35603964:-1 gene:Os01g0832000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidate cytidylyltransferase family protein. (Os01t0832000-01)
Sequence

ATGGCTGCGGCGATCCCGCCCGAGGCAAGCGGCCTGGCCCACGACCTCGGGTCCGCGGCC
GTCACCGCAGGCGTCGCCCTCGCCCTCCTCCGCTTCTTCGAGGAGCTCGCCAAGCGCGGG
GTCTTCGAGCAGAAACTCAATAGAAAACTTGTGCATATAACTATCGGTATGGTATTCTTG
CTCTTTTGGCCTCTTTTCAGCTCAGGAAGCTATGCTCCTTTCCTGGCTGCAGTAGCACCA
GGGATTAATATTATAAGGATGCTTCTGCTGGGGTTAGGAGTAATGAAAAATGAAGCTATG
GTAAAATCAATGAGCCGATCTGGAGACCCGAGGGAACTTCTCAAGGGTCCACTGTATTAT
GCTACCACTATAACTTTTGCCACTTCTATATTCTGGAGAACCTCTCCAATCGCTATAGCC
CTTATTTGCAACTTATGTGCTGGGGACGGAATAGCAGACATAGTGGGGAGACGTCTTGGC
CAAGAAAAGCTTCCATACAACCCCAACAAGTCATATGCAGGCAGCATAGCAATGGCACTA
GCTGGTTTCATGGCTTCAATTGGGTATATGCATTACTTCCAGTCATTCGGTTTCATTGAA
GAAAGCTGGTCCTTGGCTTTTGGCTTCCTTGTTGTTTCTGTAACTGCAGCACTTGTAGAG
TCCCATCCCATCAGCACACATTTGGATGACAACTTGACTGTTCCTTTAACATCATTCCTA
GTTGGTAGCCTTGTTTTCTGA

Peptide Sequence

PEP ID

Os01t0832000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:35601142:35603964:-1 gene:Os01g0832000 transcript:Os01t0832000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidate cytidylyltransferase family protein. (Os01t0832000-01)
Sequence

MAAAIPPEASGLAHDLGSAAVTAGVALALLRFFEELAKRGVFEQKLNRKLVHITIGMVFL
LFWPLFSSGSYAPFLAAVAPGINIIRMLLLGLGVMKNEAMVKSMSRSGDPRELLKGPLYY
ATTITFATSIFWRTSPIAIALICNLCAGDGIADIVGRRLGQEKLPYNPNKSYAGSIAMAL
AGFMASIGYMHYFQSFGFIEESWSLAFGFLVVSVTAALVESHPISTHLDDNLTVPLTSFL
VGSLVF

Transcript Sequence

Transcript ID

Os01t0832000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:35601142:35603964:-1 gene:Os01g0832000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidate cytidylyltransferase family protein. (Os01t0832000-01)
Sequence

ATCTCCTCTCGCTACCCTCATCCGCGCCGCGCTCTCGCCCGCAATCGAGGCCGCCCCTCT
CGCCGCCCGCCGCCGCCGCCGCCGCCTCCTGCTCCTTCGACCTGCCCCGGCCCCGCCGCC
TCGTCGCCGACGGGAGCCGGAGGAAGGGGACGATGGCTGCGGCGATCCCGCCCGAGGCAA
GCGGCCTGGCCCACGACCTCGGGTCCGCGGCCGTCACCGCAGGCGTCGCCCTCGCCCTCC
TCCGCTTCTTCGAGGAGCTCGCCAAGCGCGGGGTCTTCGAGCAGAAACTCAATAGAAAAC
TTGTGCATATAACTATCGGTATGGTATTCTTGCTCTTTTGGCCTCTTTTCAGCTCAGGAA
GCTATGCTCCTTTCCTGGCTGCAGTAGCACCAGGGATTAATATTATAAGGATGCTTCTGC
TGGGGTTAGGAGTAATGAAAAATGAAGCTATGGTAAAATCAATGAGCCGATCTGGAGACC
CGAGGGAACTTCTCAAGGGTCCACTGTATTATGCTACCACTATAACTTTTGCCACTTCTA
TATTCTGGAGAACCTCTCCAATCGCTATAGCCCTTATTTGCAACTTATGTGCTGGGGACG
GAATAGCAGACATAGTGGGGAGACGTCTTGGCCAAGAAAAGCTTCCATACAACCCCAACA
AGTCATATGCAGGCAGCATAGCAATGGCACTAGCTGGTTTCATGGCTTCAATTGGGTATA
TGCATTACTTCCAGTCATTCGGTTTCATTGAAGAAAGCTGGTCCTTGGCTTTTGGCTTCC
TTGTTGTTTCTGTAACTGCAGCACTTGTAGAGTCCCATCCCATCAGCACACATTTGGATG
ACAACTTGACTGTTCCTTTAACATCATTCCTAGTTGGTAGCCTTGTTTTCTGATGTTTAC
CTTTGAAGGAAAATTACTGGGAGATCTTCTGACATGTAAGGAATATTTCAATAAGGAACT
TTGGTTCCAATGGTATGAACAAAATTGCCCACTGGTACTTTT