Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0831000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:35558148:35559225:1 gene:Os01g0831000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LAX PANICLE 1 description:Basic helix-loop-helix (bHLH) transcription factor, Axillary meristem formation (Os01t0831000-01)
Sequence	ATGCATGACCCACGCGGCTTCCCCATCCACCCGCAGCCGTACCACCTCCACCCCACGGCC GGCGGCCTCGGCGAGGGCAGGATGCGGGGCGGCGGGCGGCGGCGCCCCGGCGCCAAGCTC TCCACCGACCCGCAGAGCGTGGCGGCGCGGGAGCGGCGGCACCGGATCAGCGACCGCTTC CGCGTGCTCCGCAGCCTCGTGCCGGGCGGCAGCAAGATGGACACGGTGTCCATGCTGGAG CAGGCCATCCACTACGTCAAGTTCCTCAAGGCGCAGGTCACCCTGCACCAGGCCGCGCTC GTGCAGCACGAGGAGGGCTGCCAGCACGCCGACGTCGCCGCGGCGTTCTCCGCCGCCGAC GCCGATCTGGCCCTTGAGCTGAACCATCGCCACGGCGGCGCCGGCGATGATGACGCCGGG ATGACGACGCTGGAGATGGCGCCGATGCAAGAGGCGGTGGGCTACGGCGACGGCCCGGCT CATCAGATGATGCAGCAAGCGCTCGATCCAGCGGGGCAGCTGATGATGGGCGGCGCTCAT CAGCTGCCTCCTTTGCCTTGCTGTGTCTTCGTCCAGGAGACTGACCCCTCGTGCTACTCG GTGTGCAATGTCCACGGTGAGGAGTCTGGTGCGCAAGGATCTTATTAG

Peptide Sequence

PEP ID	Os01t0831000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:35558148:35559225:1 gene:Os01g0831000 transcript:Os01t0831000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LAX PANICLE 1 description:Basic helix-loop-helix (bHLH) transcription factor, Axillary meristem formation (Os01t0831000-01)
Sequence	MHDPRGFPIHPQPYHLHPTAGGLGEGRMRGGGRRRPGAKLSTDPQSVAARERRHRISDRF RVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQAALVQHEEGCQHADVAAAFSAAD ADLALELNHRHGGAGDDDAGMTTLEMAPMQEAVGYGDGPAHQMMQQALDPAGQLMMGGAH QLPPLPCCVFVQETDPSCYSVCNVHGEESGAQGSY

Transcript Sequence

Transcript ID	Os01t0831000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:35558148:35559225:1 gene:Os01g0831000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LAX PANICLE 1 description:Basic helix-loop-helix (bHLH) transcription factor, Axillary meristem formation (Os01t0831000-01)
Sequence	CAGGGGCTGAAACAAACCCAGCACATTTGTGTTTGTACGCGCAGCTAGCTAGCCACGAGC GCGGATCCATCTCCTAGCTAGCGCACCATCTATGGATCCATACCACGACTAAAACATGCA TGACCCACGCGGCTTCCCCATCCACCCGCAGCCGTACCACCTCCACCCCACGGCCGGCGG CCTCGGCGAGGGCAGGATGCGGGGCGGCGGGCGGCGGCGCCCCGGCGCCAAGCTCTCCAC CGACCCGCAGAGCGTGGCGGCGCGGGAGCGGCGGCACCGGATCAGCGACCGCTTCCGCGT GCTCCGCAGCCTCGTGCCGGGCGGCAGCAAGATGGACACGGTGTCCATGCTGGAGCAGGC CATCCACTACGTCAAGTTCCTCAAGGCGCAGGTCACCCTGCACCAGGCCGCGCTCGTGCA GCACGAGGAGGGCTGCCAGCACGCCGACGTCGCCGCGGCGTTCTCCGCCGCCGACGCCGA TCTGGCCCTTGAGCTGAACCATCGCCACGGCGGCGCCGGCGATGATGACGCCGGGATGAC GACGCTGGAGATGGCGCCGATGCAAGAGGCGGTGGGCTACGGCGACGGCCCGGCTCATCA GATGATGCAGCAAGCGCTCGATCCAGCGGGGCAGCTGATGATGGGCGGCGCTCATCAGCT GCCTCCTTTGCCTTGCTGTGTCTTCGTCCAGGAGACTGACCCCTCGTGCTACTCGGTGTG CAATGTCCACGGTGAGGAGTCTGGTGCGCAAGGATCTTATTAGCTAGCTAGTGAGACAGT GGCTTGCTTAGGTAGTTAATTTCCTTAAGTATGCTCGAATATTGGCTCTACCCACTAGCT GTCTAGCTCTACTTAGCTTACCTAGGTCGTCAACCAATATATTACCGGTTGGTCATGGTC CCTTAAATTAGCTAGACTCTTGATTTCTGTAAGAATGCATATATGCATGCATGGGGTTCT GTTGGAGCAATGCATAACAGAGCTTTGTTTTACATGCATGCGTGCATGCTTCCTAGATAT CATTCTGAAATCTGAACTTGTTTGCTCGATCGCTTAATTGCTATCTCACCATTTCGGT